RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 KIAA0825Q8IV33 1275 aa7.2□□□□□ -1.26
SPTA1-207ENST00000485680 ZNF296Q8WUU4 475 aaPredicted RBP7.2□□□□□ -1.26
SPTA1-207ENST00000485680 GSTP1P09211 210 aaKnown RBP7.19□□□□□ -1.26
SPTA1-207ENST00000485680 RXRBP28702 533 aa7.19□□□□□ -1.26
SPTA1-207ENST00000485680 ARL4DP49703 201 aa7.19□□□□□ -1.26
SPTA1-207ENST00000485680 PTPN11Q06124 597 aaPredicted RBP7.19□□□□□ -1.26
SPTA1-207ENST00000485680 ZNF252P-AS1Q0IIN9 211 aa7.19□□□□□ -1.26
SPTA1-207ENST00000485680 AP3B2Q13367 1082 aa7.19□□□□□ -1.26
SPTA1-207ENST00000485680 SNAP47Q5SQN1 464 aa7.19□□□□□ -1.26
SPTA1-207ENST00000485680 LLGL2Q6P1M3 1020 aa7.19□□□□□ -1.26
SPTA1-207ENST00000485680 SPOCD1Q6ZMY3 1216 aa7.19□□□□□ -1.26
SPTA1-207ENST00000485680 BNC2Q6ZN30 1099 aaPredicted RBP7.19□□□□□ -1.26
SPTA1-207ENST00000485680 GOLM1Q8NBJ4 401 aa7.19□□□□□ -1.26
SPTA1-207ENST00000485680 DDX54Q8TDD1 881 aaKnown RBP7.19□□□□□ -1.26
SPTA1-207ENST00000485680 EAF1Q96JC9 268 aaPredicted RBP7.19□□□□□ -1.26
SPTA1-207ENST00000485680 KRTAP4-5Q9BYR2 181 aa7.19□□□□□ -1.26
SPTA1-207ENST00000485680 PAK6Q9NQU5 681 aaPredicted RBP7.19□□□□□ -1.26
SPTA1-207ENST00000485680 SAMM50Q9Y512 469 aa7.19□□□□□ -1.26
SPTA1-207ENST00000485680 CECR2Q9BXF3 1484 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 DBX1A6NMT0 343 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 CYP26A1O43174 497 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 PAPLNO95428 1278 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 MAOBP27338 520 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 ZNF124Q15973 351 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 MAP1SQ66K74 1059 aaPredicted RBP7.18□□□□□ -1.26
SPTA1-207ENST00000485680 FBXO27Q8NI29 283 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 JARID2Q92833 1246 aaPredicted RBP7.18□□□□□ -1.26
SPTA1-207ENST00000485680 KCNB2Q92953 911 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 GAL3ST3Q96A11 431 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 GPRASP2Q96D09 838 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 USP26Q9BXU7 913 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 KCNQ5Q9NR82 932 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 USP35Q9P2H5 1018 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 CYP8B1Q9UNU6 501 aa7.18□□□□□ -1.26
SPTA1-207ENST00000485680 MROH2BQ7Z745 1585 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 FAM95CA0A1B0GW59 222 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 TIAF1O95411 115 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 F13A1P00488 732 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 LMNB1P20700 586 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 ADMP35318 185 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 CRKP46108 304 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 GJA8P48165 433 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 LRRC14Q15048 493 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 POU4F3Q15319 338 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 NFKBIBQ15653 356 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 C12orf50Q8NA57 414 aaPredicted RBP7.17□□□□□ -1.26
SPTA1-207ENST00000485680 SMG8Q8ND04 991 aaKnown RBP7.17□□□□□ -1.26
SPTA1-207ENST00000485680 AGBL5Q8NDL9 886 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 METTL22Q9BUU2 404 aaPredicted RBP7.17□□□□□ -1.26
SPTA1-207ENST00000485680 EMILIN2Q9BXX0 1053 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 TMPRSS13Q9BYE2 586 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 MIR1-1HGQ9H1L0 117 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 CCDC86Q9H6F5 360 aaKnown RBP7.17□□□□□ -1.26
SPTA1-207ENST00000485680 UBP1Q9NZI7 540 aa7.17□□□□□ -1.26
SPTA1-207ENST00000485680 SUPT16HQ9Y5B9 1047 aaKnown RBP7.17□□□□□ -1.26
SPTA1-207ENST00000485680 LOC100289279A0A1B0GTE1 492 aa7.16□□□□□ -1.26
SPTA1-207ENST00000485680 KRTAP9-7A8MTY7 169 aa7.16□□□□□ -1.26
SPTA1-207ENST00000485680 TLR3O15455 904 aaKnown RBP7.16□□□□□ -1.26
SPTA1-207ENST00000485680 GREM1O60565 184 aa7.16□□□□□ -1.26
SPTA1-207ENST00000485680 DLGAP3O95886 979 aa7.16□□□□□ -1.26
SPTA1-207ENST00000485680 CYP11A1P05108 521 aa7.16□□□□□ -1.26
SPTA1-207ENST00000485680 DNAJA1P31689 397 aaKnown RBP7.16□□□□□ -1.26
SPTA1-207ENST00000485680 NUTM2GQ5VZR2 741 aa7.16□□□□□ -1.26
SPTA1-207ENST00000485680 PAOXQ6QHF9 649 aa7.16□□□□□ -1.26
SPTA1-207ENST00000485680 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.16□□□□□ -1.26
SPTA1-207ENST00000485680 FLCNQ8NFG4 579 aa7.16□□□□□ -1.26
SPTA1-207ENST00000485680 SREK1Q8WXA9 508 aaKnown RBP7.16□□□□□ -1.26
SPTA1-207ENST00000485680 CORO1BQ9BR76 489 aa7.16□□□□□ -1.26
SPTA1-207ENST00000485680 SUGCTQ9HAC7 445 aa7.16□□□□□ -1.26
SPTA1-207ENST00000485680 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.16□□□□□ -1.26
SPTA1-207ENST00000485680 CDK8P49336 464 aa7.15□□□□□ -1.26
SPTA1-207ENST00000485680 GNL2Q13823 731 aaKnown RBP7.15□□□□□ -1.26
SPTA1-207ENST00000485680 CDPF1Q6NVV7 123 aa7.15□□□□□ -1.26
SPTA1-207ENST00000485680 FAM196AQ6ZSG2 479 aa7.15□□□□□ -1.26
SPTA1-207ENST00000485680 SLC43A3Q8NBI5 491 aa7.15□□□□□ -1.26
SPTA1-207ENST00000485680 GPBAR1Q8TDU6 330 aa7.15□□□□□ -1.26
SPTA1-207ENST00000485680 WDR89Q96FK6 387 aaPredicted RBP7.15□□□□□ -1.26
SPTA1-207ENST00000485680 CARMIL2Q6F5E8 1435 aa7.15□□□□□ -1.27
SPTA1-207ENST00000485680 FAM221AA4D161 298 aa7.14□□□□□ -1.27
SPTA1-207ENST00000485680 ZNF862O60290 1169 aa7.14□□□□□ -1.27
SPTA1-207ENST00000485680 LIG1P18858 919 aa7.14□□□□□ -1.27
SPTA1-207ENST00000485680 PDE3AQ14432 1141 aa7.14□□□□□ -1.27
SPTA1-207ENST00000485680 ZAR1Q86SH2 424 aa7.14□□□□□ -1.27
SPTA1-207ENST00000485680 FBLIM1Q8WUP2 373 aa7.14□□□□□ -1.27
SPTA1-207ENST00000485680 GATA6Q92908 595 aa7.14□□□□□ -1.27
SPTA1-207ENST00000485680 NT5C1AQ9BXI3 368 aa7.14□□□□□ -1.27
SPTA1-207ENST00000485680 TANGO6Q9C0B7 1094 aa7.14□□□□□ -1.27
SPTA1-207ENST00000485680 CACNA2D2Q9NY47 1150 aa7.14□□□□□ -1.27
SPTA1-207ENST00000485680 PPP1R1BQ9UD71 204 aaPredicted RBP7.14□□□□□ -1.27
SPTA1-207ENST00000485680 PRKAG2Q9UGJ0 569 aa7.14□□□□□ -1.27
SPTA1-207ENST00000485680 TRIM37O94972 964 aa7.13□□□□□ -1.27
SPTA1-207ENST00000485680 DRD2P14416 443 aa7.13□□□□□ -1.27
SPTA1-207ENST00000485680 ATF4P18848 351 aaPredicted RBP7.13□□□□□ -1.27
SPTA1-207ENST00000485680 ARID5AQ03989 594 aa7.13□□□□□ -1.27
SPTA1-207ENST00000485680 APOBRQ0VD83 1088 aa7.13□□□□□ -1.27
SPTA1-207ENST00000485680 RASGRP4Q8TDF6 673 aa7.13□□□□□ -1.27
SPTA1-207ENST00000485680 GATAD2BQ8WXI9 593 aa7.13□□□□□ -1.27
SPTA1-207ENST00000485680 ACSBG1Q96GR2 724 aa7.13□□□□□ -1.27
SPTA1-207ENST00000485680 TBC1D32Q96NH3 1257 aa7.13□□□□□ -1.27
SPTA1-207ENST00000485680 CYP4F12Q9HCS2 524 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms