RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 SNX14Q9Y5W7 946 aa18.84■□□□□ 0.61
APOE-205ENST00000485628 SSC5DA1L4H1 1573 aa18.84■□□□□ 0.61
APOE-205ENST00000485628 POLR3DP05423 398 aaPredicted RBP18.83■□□□□ 0.6
APOE-205ENST00000485628 PCP11498 1178 aaKnown RBP18.83■□□□□ 0.6
APOE-205ENST00000485628 EAPPQ56P03 285 aaPredicted RBP18.83■□□□□ 0.6
APOE-205ENST00000485628 CDC37L1Q7L3B6 337 aa18.83■□□□□ 0.6
APOE-205ENST00000485628 NKX2-3Q8TAU0 364 aa18.83■□□□□ 0.6
APOE-205ENST00000485628 ZNF526Q8TF50 670 aaPredicted RBP18.83■□□□□ 0.6
APOE-205ENST00000485628 C22orf23Q9BZE7 217 aa18.83■□□□□ 0.6
APOE-205ENST00000485628 SERPINB13Q9UIV8 391 aa18.83■□□□□ 0.6
APOE-205ENST00000485628 MINDY4BA8MYZ0 360 aa18.82■□□□□ 0.6
APOE-205ENST00000485628 ORC4O43929 436 aa18.82■□□□□ 0.6
APOE-205ENST00000485628 ITGBL1O95965 494 aaPredicted RBP18.82■□□□□ 0.6
APOE-205ENST00000485628 SLURP2P0DP57 97 aa18.82■□□□□ 0.6
APOE-205ENST00000485628 HAND2P61296 217 aa18.82■□□□□ 0.6
APOE-205ENST00000485628 CTDSPL2Q05D32 466 aa18.82■□□□□ 0.6
APOE-205ENST00000485628 AKNAD1Q5T1N1 836 aa18.82■□□□□ 0.6
APOE-205ENST00000485628 NBPF12Q5TAG4 269 aaPredicted RBP18.82■□□□□ 0.6
APOE-205ENST00000485628 TATDN1Q6P1N9 297 aa18.82■□□□□ 0.6
APOE-205ENST00000485628 KRT26Q7Z3Y9 468 aa18.82■□□□□ 0.6
APOE-205ENST00000485628 SULF1Q8IWU6 871 aa18.82■□□□□ 0.6
APOE-205ENST00000485628 CSRNP1Q96S65 589 aa18.82■□□□□ 0.6
APOE-205ENST00000485628 GPBP1L1Q9HC44 474 aaPredicted RBP18.82■□□□□ 0.6
APOE-205ENST00000485628 HERC5Q9UII4 1024 aaKnown RBP18.82■□□□□ 0.6
APOE-205ENST00000485628 ADM5C9JUS6 153 aa18.81■□□□□ 0.6
APOE-205ENST00000485628 E7EWF7 191 aa18.81■□□□□ 0.6
APOE-205ENST00000485628 SHMT1P34896 483 aa18.81■□□□□ 0.6
APOE-205ENST00000485628 CDK8P49336 464 aa18.81■□□□□ 0.6
APOE-205ENST00000485628 COL9A3Q14050 684 aaPredicted RBP18.81■□□□□ 0.6
APOE-205ENST00000485628 RNF20Q5VTR2 975 aa18.81■□□□□ 0.6
APOE-205ENST00000485628 DLK2Q6UY11 383 aa18.81■□□□□ 0.6
APOE-205ENST00000485628 USP48Q86UV5 1035 aa18.81■□□□□ 0.6
APOE-205ENST00000485628 DYNLL2Q96FJ2 89 aa18.81■□□□□ 0.6
APOE-205ENST00000485628 INCENPQ9NQS7 918 aa18.81■□□□□ 0.6
APOE-205ENST00000485628 ZNF112Q9UJU3 913 aa18.81■□□□□ 0.6
APOE-205ENST00000485628 PAPPA2Q9BXP8 1791 aa18.81■□□□□ 0.6
APOE-205ENST00000485628 GREB1LQ9C091 1923 aaPredicted RBP18.8■□□□□ 0.6
APOE-205ENST00000485628 PHF20L1A8MW92 1017 aa18.8■□□□□ 0.6
APOE-205ENST00000485628 HLA-DOAP06340 250 aa18.8■□□□□ 0.6
APOE-205ENST00000485628 YY1P25490 414 aa18.8■□□□□ 0.6
APOE-205ENST00000485628 NT5C2P49902 561 aa18.8■□□□□ 0.6
APOE-205ENST00000485628 ADCK5Q3MIX3 580 aa18.8■□□□□ 0.6
APOE-205ENST00000485628 ZNF784Q8NCA9 323 aaPredicted RBP18.8■□□□□ 0.6
APOE-205ENST00000485628 GLIS2Q9BZE0 524 aaPredicted RBP18.8■□□□□ 0.6
APOE-205ENST00000485628 TM6SF1Q9BZW5 370 aa18.8■□□□□ 0.6
APOE-205ENST00000485628 SWAP70Q9UH65 585 aa18.8■□□□□ 0.6
APOE-205ENST00000485628 RASA1P20936 1047 aa18.79■□□□□ 0.6
APOE-205ENST00000485628 RRP1BQ14684 758 aaKnown RBP18.79■□□□□ 0.6
APOE-205ENST00000485628 PRAMEF18Q5VWM3 479 aa18.79■□□□□ 0.6
APOE-205ENST00000485628 MAP1SQ66K74 1059 aaPredicted RBP18.79■□□□□ 0.6
APOE-205ENST00000485628 ZSCAN29Q8IWY8 852 aaPredicted RBP18.79■□□□□ 0.6
APOE-205ENST00000485628 AMOTL1Q8IY63 956 aa18.79■□□□□ 0.6
APOE-205ENST00000485628 SLC44A5Q8NCS7 719 aa18.79■□□□□ 0.6
APOE-205ENST00000485628 NEDD4P46934 1319 aa18.78■□□□□ 0.6
APOE-205ENST00000485628 ZKSCAN1P17029 563 aaPredicted RBP18.78■□□□□ 0.6
APOE-205ENST00000485628 MCCP23508 829 aa18.78■□□□□ 0.6
APOE-205ENST00000485628 SLC4A8Q2Y0W8 1093 aa18.78■□□□□ 0.6
APOE-205ENST00000485628 CHADLQ6NUI6 762 aa18.78■□□□□ 0.6
APOE-205ENST00000485628 MB21D2Q8IYB1 491 aaPredicted RBP18.78■□□□□ 0.6
APOE-205ENST00000485628 CDCA5Q96FF9 252 aa18.78■□□□□ 0.6
APOE-205ENST00000485628 RNF41Q9H4P4 317 aaPredicted RBP18.78■□□□□ 0.6
APOE-205ENST00000485628 MYH8P13535 1937 aa18.77■□□□□ 0.6
APOE-205ENST00000485628 NOVP48745 357 aa18.77■□□□□ 0.6
APOE-205ENST00000485628 EXOSC10Q01780 885 aaKnown RBP18.77■□□□□ 0.6
APOE-205ENST00000485628 PDE4BQ07343 736 aa18.77■□□□□ 0.6
APOE-205ENST00000485628 KRT32Q14532 448 aa18.77■□□□□ 0.6
APOE-205ENST00000485628 MAP3K11Q16584 847 aa18.77■□□□□ 0.6
APOE-205ENST00000485628 SUPT20HL1Q3ZLR7 823 aa18.77■□□□□ 0.6
APOE-205ENST00000485628 MFSD6Q6ZSS7 791 aa18.77■□□□□ 0.6
APOE-205ENST00000485628 HOOK2Q96ED9 719 aa18.77■□□□□ 0.6
APOE-205ENST00000485628 UPF2Q9HAU5 1272 aaKnown RBP18.77■□□□□ 0.6
APOE-205ENST00000485628 ZSWIM6Q9HCJ5 1215 aa18.77■□□□□ 0.6
APOE-205ENST00000485628 CLEC11AQ9Y240 323 aa18.77■□□□□ 0.6
APOE-205ENST00000485628 SLC3A2P08195 630 aaKnown RBP18.76■□□□□ 0.59
APOE-205ENST00000485628 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.76■□□□□ 0.59
APOE-205ENST00000485628 CNNM2Q9H8M5 875 aa18.76■□□□□ 0.59
APOE-205ENST00000485628 PLIN4Q96Q06 1357 aa18.76■□□□□ 0.59
APOE-205ENST00000485628 PASKQ96RG2 1323 aa18.75■□□□□ 0.59
APOE-205ENST00000485628 FAM196BA6NMK8 535 aa18.75■□□□□ 0.59
APOE-205ENST00000485628 USP2O75604 605 aaPredicted RBP18.75■□□□□ 0.59
APOE-205ENST00000485628 JAG1P78504 1218 aa18.75■□□□□ 0.59
APOE-205ENST00000485628 MIGA2Q7L4E1 593 aa18.75■□□□□ 0.59
APOE-205ENST00000485628 FBXL16Q8N461 479 aa18.75■□□□□ 0.59
APOE-205ENST00000485628 RBM46Q8TBY0 533 aaKnown RBP18.75■□□□□ 0.59
APOE-205ENST00000485628 KLRG1Q96E93 195 aa18.75■□□□□ 0.59
APOE-205ENST00000485628 KRT23Q9C075 422 aa18.75■□□□□ 0.59
APOE-205ENST00000485628 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.75■□□□□ 0.59
APOE-205ENST00000485628 ZNF287Q9HBT7 754 aa18.75■□□□□ 0.59
APOE-205ENST00000485628 TCP11L1Q9NUJ3 509 aa18.75■□□□□ 0.59
APOE-205ENST00000485628 ZSWIM5Q9P217 1185 aa18.75■□□□□ 0.59
APOE-205ENST00000485628 TRPM7Q96QT4 1865 aa18.75■□□□□ 0.59
APOE-205ENST00000485628 IGKV6D-41A0A0C4DH26 115 aa18.74■□□□□ 0.59
APOE-205ENST00000485628 TRAF5O00463 557 aa18.74■□□□□ 0.59
APOE-205ENST00000485628 PRDM1O75626 825 aa18.74■□□□□ 0.59
APOE-205ENST00000485628 GUCY1A2P33402 732 aa18.74■□□□□ 0.59
APOE-205ENST00000485628 ANTXR2P58335 489 aa18.74■□□□□ 0.59
APOE-205ENST00000485628 FMR1Q06787 632 aaKnown RBP eCLIP18.74■□□□□ 0.59
APOE-205ENST00000485628 DCAF15Q66K64 600 aa18.74■□□□□ 0.59
APOE-205ENST00000485628 CYB5R4Q7L1T6 521 aa18.74■□□□□ 0.59
APOE-205ENST00000485628 NEDD1Q8NHV4 660 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms