RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ARMT1Q9H993 441 aa23.1■■□□□ 1.29
SNX17-206ENST00000484886 MYH1P12882 1939 aa23.1■■□□□ 1.29
SNX17-206ENST00000484886 CCL15-CCL14A0A0B4J2E2 113 aa23.09■■□□□ 1.29
SNX17-206ENST00000484886 TBC1D12O60347 775 aa23.09■■□□□ 1.29
SNX17-206ENST00000484886 MAP3K10Q02779 954 aa23.09■■□□□ 1.29
SNX17-206ENST00000484886 PPATQ06203 517 aa23.09■■□□□ 1.29
SNX17-206ENST00000484886 UBE3CQ15386 1083 aa23.09■■□□□ 1.29
SNX17-206ENST00000484886 CCL15Q16663 113 aa23.09■■□□□ 1.29
SNX17-206ENST00000484886 OTUD7BQ6GQQ9 843 aa23.09■■□□□ 1.29
SNX17-206ENST00000484886 IFNL1Q8IU54 200 aa23.09■■□□□ 1.29
SNX17-206ENST00000484886 PI4K2BQ8TCG2 481 aa23.09■■□□□ 1.29
SNX17-206ENST00000484886 HERC5Q9UII4 1024 aaKnown RBP23.09■■□□□ 1.29
SNX17-206ENST00000484886 IRF6O14896 467 aa23.08■■□□□ 1.29
SNX17-206ENST00000484886 CTNND1O60716 968 aaKnown RBP23.08■■□□□ 1.29
SNX17-206ENST00000484886 TBC1D8O95759 1140 aa23.08■■□□□ 1.29
SNX17-206ENST00000484886 ALDH1A1P00352 501 aa23.08■■□□□ 1.29
SNX17-206ENST00000484886 CHGBP05060 677 aa23.08■■□□□ 1.29
SNX17-206ENST00000484886 SNAPC2Q13487 334 aa23.08■■□□□ 1.29
SNX17-206ENST00000484886 LAMB1P07942 1786 aa23.08■■□□□ 1.29
SNX17-206ENST00000484886 DOCK1Q14185 1865 aa23.08■■□□□ 1.29
SNX17-206ENST00000484886 NAV1Q8NEY1 1877 aa23.08■■□□□ 1.29
SNX17-206ENST00000484886 IGF2BP3O00425 579 aaKnown RBP eCLIP23.07■■□□□ 1.28
SNX17-206ENST00000484886 LRRFIP1Q32MZ4 808 aaKnown RBP23.07■■□□□ 1.28
SNX17-206ENST00000484886 CHD1LQ86WJ1 897 aa23.07■■□□□ 1.28
SNX17-206ENST00000484886 FSD1Q9BTV5 496 aa23.07■■□□□ 1.28
SNX17-206ENST00000484886 SIPA1L1O43166 1804 aa23.06■■□□□ 1.28
SNX17-206ENST00000484886 POLR3DP05423 398 aaPredicted RBP23.06■■□□□ 1.28
SNX17-206ENST00000484886 CETPP11597 493 aa23.06■■□□□ 1.28
SNX17-206ENST00000484886 PDE1AP54750 535 aa23.06■■□□□ 1.28
SNX17-206ENST00000484886 FOXP4Q8IVH2 680 aaPredicted RBP23.06■■□□□ 1.28
SNX17-206ENST00000484886 SDR42E1Q8WUS8 393 aa23.06■■□□□ 1.28
SNX17-206ENST00000484886 MS4A4AQ96JQ5 239 aa23.06■■□□□ 1.28
SNX17-206ENST00000484886 MCM9Q9NXL9 1143 aa23.06■■□□□ 1.28
SNX17-206ENST00000484886 SALL3Q9BXA9 1300 aa23.06■■□□□ 1.28
SNX17-206ENST00000484886 RNF113AO15541 343 aaKnown RBP23.05■■□□□ 1.28
SNX17-206ENST00000484886 ZFYP08048 801 aaPredicted RBP23.05■■□□□ 1.28
SNX17-206ENST00000484886 PTPRAP18433 802 aa23.05■■□□□ 1.28
SNX17-206ENST00000484886 NUCB1Q02818 461 aa23.05■■□□□ 1.28
SNX17-206ENST00000484886 TTC6Q86TZ1 520 aa23.05■■□□□ 1.28
SNX17-206ENST00000484886 TNS4Q8IZW8 715 aa23.05■■□□□ 1.28
SNX17-206ENST00000484886 BRI3BPQ8WY22 251 aa23.05■■□□□ 1.28
SNX17-206ENST00000484886 ZHX2Q9Y6X8 837 aa23.05■■□□□ 1.28
SNX17-206ENST00000484886 CASP8AP2Q9UKL3 1982 aa23.04■■□□□ 1.28
SNX17-206ENST00000484886 DDRGK1Q96HY6 314 aa23.04■■□□□ 1.28
SNX17-206ENST00000484886 PTPN18Q99952 460 aa23.04■■□□□ 1.28
SNX17-206ENST00000484886 PUS7LQ9H0K6 701 aaKnown RBP23.04■■□□□ 1.28
SNX17-206ENST00000484886 STAP2Q9UGK3 403 aa23.04■■□□□ 1.28
SNX17-206ENST00000484886 SLC4A4Q9Y6R1 1079 aa23.04■■□□□ 1.28
SNX17-206ENST00000484886 TESPA1A2RU30 521 aaPredicted RBP23.03■■□□□ 1.28
SNX17-206ENST00000484886 PRKAB2O43741 272 aa23.03■■□□□ 1.28
SNX17-206ENST00000484886 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.03■■□□□ 1.28
SNX17-206ENST00000484886 ATAD5Q96QE3 1844 aa23.03■■□□□ 1.28
SNX17-206ENST00000484886 CAP2P40123 477 aa23.02■■□□□ 1.28
SNX17-206ENST00000484886 APPBP2Q92624 585 aa23.02■■□□□ 1.28
SNX17-206ENST00000484886 DNAJC18Q9H819 358 aa23.02■■□□□ 1.28
SNX17-206ENST00000484886 DCP1AQ9NPI6 582 aaPredicted RBP23.02■■□□□ 1.28
SNX17-206ENST00000484886 SERPINB13Q9UIV8 391 aa23.02■■□□□ 1.28
SNX17-206ENST00000484886 CCDC84Q86UT8 332 aaPredicted RBP23.01■■□□□ 1.27
SNX17-206ENST00000484886 AMOTL1Q8IY63 956 aa23.01■■□□□ 1.27
SNX17-206ENST00000484886 EHD4Q9H223 541 aa23.01■■□□□ 1.27
SNX17-206ENST00000484886 ATP8A2Q9NTI2 1148 aa23.01■■□□□ 1.27
SNX17-206ENST00000484886 KCNH4Q9UQ05 1017 aa23.01■■□□□ 1.27
SNX17-206ENST00000484886 DDX60LQ5H9U9 1706 aaKnown RBP23.01■■□□□ 1.27
SNX17-206ENST00000484886 TRIM75PA6NK02 468 aa23■■□□□ 1.27
SNX17-206ENST00000484886 GDF11O95390 407 aa23■■□□□ 1.27
SNX17-206ENST00000484886 RRP1BQ14684 758 aaKnown RBP23■■□□□ 1.27
SNX17-206ENST00000484886 TAF1CQ15572 869 aaPredicted RBP23■■□□□ 1.27
SNX17-206ENST00000484886 METTL16Q86W50 562 aaKnown RBP23■■□□□ 1.27
SNX17-206ENST00000484886 FAM43AQ8N2R8 423 aa23■■□□□ 1.27
SNX17-206ENST00000484886 OSBP2Q969R2 916 aa23■■□□□ 1.27
SNX17-206ENST00000484886 EVI5LQ96CN4 794 aa23■■□□□ 1.27
SNX17-206ENST00000484886 TRIM6-TRIM34B2RNG4 842 aa22.99■■□□□ 1.27
SNX17-206ENST00000484886 GPR25O00155 361 aa22.99■■□□□ 1.27
SNX17-206ENST00000484886 CXCL11O14625 94 aa22.99■■□□□ 1.27
SNX17-206ENST00000484886 PLCD1P51178 756 aa22.99■■□□□ 1.27
SNX17-206ENST00000484886 CRHR2Q13324 411 aa22.99■■□□□ 1.27
SNX17-206ENST00000484886 R3HDMLQ9H3Y0 253 aa22.99■■□□□ 1.27
SNX17-206ENST00000484886 AFG3L2Q9Y4W6 797 aa22.99■■□□□ 1.27
SNX17-206ENST00000484886 BAZ2AQ9UIF9 1905 aaKnown RBP22.98■■□□□ 1.27
SNX17-206ENST00000484886 BTBD19C9JJ37 291 aa22.98■■□□□ 1.27
SNX17-206ENST00000484886 CYP2D6P10635 497 aa22.98■■□□□ 1.27
SNX17-206ENST00000484886 GADL1Q6ZQY3 521 aa22.98■■□□□ 1.27
SNX17-206ENST00000484886 STRBPQ96SI9 672 aaKnown RBP22.98■■□□□ 1.27
SNX17-206ENST00000484886 CFHR5Q9BXR6 569 aa22.98■■□□□ 1.27
SNX17-206ENST00000484886 ZFYVE28Q9HCC9 887 aa22.98■■□□□ 1.27
SNX17-206ENST00000484886 PHIPQ8WWQ0 1821 aa22.97■■□□□ 1.27
SNX17-206ENST00000484886 USP17L5A8MUK1 530 aa22.97■■□□□ 1.27
SNX17-206ENST00000484886 M0R2C6 588 aa22.97■■□□□ 1.27
SNX17-206ENST00000484886 GPAA1O43292 621 aa22.97■■□□□ 1.27
SNX17-206ENST00000484886 ASNSP08243 561 aa22.97■■□□□ 1.27
SNX17-206ENST00000484886 PLEKHM2Q8IWE5 1019 aa22.97■■□□□ 1.27
SNX17-206ENST00000484886 ZNF296Q8WUU4 475 aaPredicted RBP22.97■■□□□ 1.27
SNX17-206ENST00000484886 RILPL2Q969X0 211 aa22.97■■□□□ 1.27
SNX17-206ENST00000484886 AS3MTQ9HBK9 375 aa22.97■■□□□ 1.27
SNX17-206ENST00000484886 FKTNO75072 461 aa22.96■■□□□ 1.27
SNX17-206ENST00000484886 APPP05067 770 aa22.96■■□□□ 1.27
SNX17-206ENST00000484886 SPP2Q13103 211 aa22.96■■□□□ 1.27
SNX17-206ENST00000484886 CERKLQ49MI3 558 aaPredicted RBP22.96■■□□□ 1.27
SNX17-206ENST00000484886 FASTKD5Q7L8L6 764 aaKnown RBP22.96■■□□□ 1.27
SNX17-206ENST00000484886 ZNF280CQ8ND82 737 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms