RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 MAP3K10Q02779 954 aa14.91□□□□□ -0.02
MSH5-216ENST00000484309 SLC9C2Q5TAH2 1124 aa14.91□□□□□ -0.02
MSH5-216ENST00000484309 CTU1Q7Z7A3 348 aaKnown RBP14.91□□□□□ -0.02
MSH5-216ENST00000484309 PICK1Q9NRD5 415 aa14.91□□□□□ -0.02
MSH5-216ENST00000484309 PALD1Q9ULE6 856 aa14.91□□□□□ -0.02
MSH5-216ENST00000484309 ZNF532Q9HCE3 1301 aa14.91□□□□□ -0.02
MSH5-216ENST00000484309 BTBD19C9JJ37 291 aa14.9□□□□□ -0.02
MSH5-216ENST00000484309 IGSF3O75054 1194 aa14.9□□□□□ -0.02
MSH5-216ENST00000484309 CHGBP05060 677 aa14.9□□□□□ -0.02
MSH5-216ENST00000484309 PTPRAP18433 802 aa14.9□□□□□ -0.02
MSH5-216ENST00000484309 USP5P45974 858 aa14.9□□□□□ -0.02
MSH5-216ENST00000484309 RRP1BQ14684 758 aaKnown RBP14.9□□□□□ -0.02
MSH5-216ENST00000484309 HAUS7Q99871 368 aa14.9□□□□□ -0.02
MSH5-216ENST00000484309 ZHX2Q9Y6X8 837 aa14.9□□□□□ -0.02
MSH5-216ENST00000484309 LOC285556D6RIA3 1793 aa14.9□□□□□ -0.02
MSH5-216ENST00000484309 MGAMO43451 1857 aa14.89□□□□□ -0.03
MSH5-216ENST00000484309 MAGEB6P1A0A0J9YX57 407 aa14.89□□□□□ -0.03
MSH5-216ENST00000484309 CCDC85CA6NKD9 419 aa14.89□□□□□ -0.03
MSH5-216ENST00000484309 TBC1D12O60347 775 aa14.89□□□□□ -0.03
MSH5-216ENST00000484309 CTNND1O60716 968 aaKnown RBP14.89□□□□□ -0.03
MSH5-216ENST00000484309 RIOK1Q9BRS2 568 aaKnown RBP14.89□□□□□ -0.03
MSH5-216ENST00000484309 ECHDC1Q9NTX5 307 aa14.89□□□□□ -0.03
MSH5-216ENST00000484309 KCNH4Q9UQ05 1017 aa14.89□□□□□ -0.03
MSH5-216ENST00000484309 TCRBV5S4A2TA0A5A2 114 aa14.88□□□□□ -0.03
MSH5-216ENST00000484309 NOM1Q5C9Z4 860 aaKnown RBP14.88□□□□□ -0.03
MSH5-216ENST00000484309 LCORLQ8N3X6 602 aa14.88□□□□□ -0.03
MSH5-216ENST00000484309 CRACR2BQ8N4Y2 399 aaPredicted RBP14.88□□□□□ -0.03
MSH5-216ENST00000484309 CD99L2Q8TCZ2 262 aa14.88□□□□□ -0.03
MSH5-216ENST00000484309 OTUD7AQ8TE49 926 aaPredicted RBP14.88□□□□□ -0.03
MSH5-216ENST00000484309 TRIM34Q9BYJ4 488 aa14.88□□□□□ -0.03
MSH5-216ENST00000484309 DHX36Q9H2U1 1008 aaKnown RBP14.88□□□□□ -0.03
MSH5-216ENST00000484309 DNAJC18Q9H819 358 aa14.88□□□□□ -0.03
MSH5-216ENST00000484309 ZFYVE28Q9HCC9 887 aa14.88□□□□□ -0.03
MSH5-216ENST00000484309 PI4KBQ9UBF8 816 aa14.88□□□□□ -0.03
MSH5-216ENST00000484309 TRIM75PA6NK02 468 aa14.87□□□□□ -0.03
MSH5-216ENST00000484309 ECM2O94769 699 aaPredicted RBP14.87□□□□□ -0.03
MSH5-216ENST00000484309 GDF11O95390 407 aa14.87□□□□□ -0.03
MSH5-216ENST00000484309 HLA-DOAP06340 250 aa14.87□□□□□ -0.03
MSH5-216ENST00000484309 ADD2P35612 726 aa14.87□□□□□ -0.03
MSH5-216ENST00000484309 MOGSQ13724 837 aa14.87□□□□□ -0.03
MSH5-216ENST00000484309 SHROOM1Q2M3G4 852 aaPredicted RBP14.87□□□□□ -0.03
MSH5-216ENST00000484309 GADL1Q6ZQY3 521 aa14.87□□□□□ -0.03
MSH5-216ENST00000484309 ARMT1Q9H993 441 aa14.87□□□□□ -0.03
MSH5-216ENST00000484309 HERC5Q9UII4 1024 aaKnown RBP14.87□□□□□ -0.03
MSH5-216ENST00000484309 AFG3L2Q9Y4W6 797 aa14.87□□□□□ -0.03
MSH5-216ENST00000484309 PDHXO00330 501 aa14.86□□□□□ -0.03
MSH5-216ENST00000484309 CAP2P40123 477 aa14.86□□□□□ -0.03
MSH5-216ENST00000484309 JAG1P78504 1218 aa14.86□□□□□ -0.03
MSH5-216ENST00000484309 CAP1Q01518 475 aa14.86□□□□□ -0.03
MSH5-216ENST00000484309 CERS3Q8IU89 383 aa14.86□□□□□ -0.03
MSH5-216ENST00000484309 EXOC6Q8TAG9 804 aa14.86□□□□□ -0.03
MSH5-216ENST00000484309 SDR42E1Q8WUS8 393 aa14.86□□□□□ -0.03
MSH5-216ENST00000484309 GPATCH3Q96I76 525 aa14.86□□□□□ -0.03
MSH5-216ENST00000484309 SUPT16HQ9Y5B9 1047 aaKnown RBP14.86□□□□□ -0.03
MSH5-216ENST00000484309 A0A0G2JLL6 359 aaPredicted RBP14.85□□□□□ -0.03
MSH5-216ENST00000484309 CXCL11O14625 94 aa14.85□□□□□ -0.03
MSH5-216ENST00000484309 MBD4O95243 580 aa14.85□□□□□ -0.03
MSH5-216ENST00000484309 SP3Q02447 781 aa14.85□□□□□ -0.03
MSH5-216ENST00000484309 EVX2Q03828 476 aa14.85□□□□□ -0.03
MSH5-216ENST00000484309 TMED8Q6PL24 325 aaPredicted RBP14.85□□□□□ -0.03
MSH5-216ENST00000484309 PRRT2Q7Z6L0 340 aaPredicted RBP14.85□□□□□ -0.03
MSH5-216ENST00000484309 ANKRD23Q86SG2 305 aa14.85□□□□□ -0.03
MSH5-216ENST00000484309 CRNKL1Q9BZJ0 848 aaKnown RBP14.85□□□□□ -0.03
MSH5-216ENST00000484309 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.85□□□□□ -0.037e-14■■■■□ 19.6
MSH5-216ENST00000484309 TRIM17Q9Y577 477 aa14.85□□□□□ -0.03
MSH5-216ENST00000484309 PRKAB2O43741 272 aa14.84□□□□□ -0.03
MSH5-216ENST00000484309 SPP2Q13103 211 aa14.84□□□□□ -0.03
MSH5-216ENST00000484309 ANKRD45Q5TZF3 282 aa14.84□□□□□ -0.03
MSH5-216ENST00000484309 GPAT2Q6NUI2 795 aa14.84□□□□□ -0.03
MSH5-216ENST00000484309 OTOP1Q7RTM1 612 aa14.84□□□□□ -0.03
MSH5-216ENST00000484309 FOXP4Q8IVH2 680 aaPredicted RBP14.84□□□□□ -0.03
MSH5-216ENST00000484309 ERO1AQ96HE7 468 aa14.84□□□□□ -0.03
MSH5-216ENST00000484309 CPA4Q9UI42 421 aa14.84□□□□□ -0.03
MSH5-216ENST00000484309 TLR2O60603 784 aa14.83□□□□□ -0.04
MSH5-216ENST00000484309 POLR3DP05423 398 aaPredicted RBP14.83□□□□□ -0.04
MSH5-216ENST00000484309 CYP2C8P10632 490 aa14.83□□□□□ -0.04
MSH5-216ENST00000484309 CYP2D6P10635 497 aa14.83□□□□□ -0.04
MSH5-216ENST00000484309 PLCD1P51178 756 aa14.83□□□□□ -0.04
MSH5-216ENST00000484309 IRX6P78412 446 aaPredicted RBP14.83□□□□□ -0.04
MSH5-216ENST00000484309 METTL16Q86W50 562 aaKnown RBP14.83□□□□□ -0.04
MSH5-216ENST00000484309 ZCCHC17Q9NP64 241 aaKnown RBP14.83□□□□□ -0.04
MSH5-216ENST00000484309 MCM9Q9NXL9 1143 aa14.83□□□□□ -0.04
MSH5-216ENST00000484309 HPS5Q9UPZ3 1129 aa14.83□□□□□ -0.04
MSH5-216ENST00000484309 DOCK3Q8IZD9 2030 aa14.82□□□□□ -0.04
MSH5-216ENST00000484309 USP17L5A8MUK1 530 aa14.82□□□□□ -0.04
MSH5-216ENST00000484309 HMGCS2P54868 508 aa14.82□□□□□ -0.04
MSH5-216ENST00000484309 HDAC1Q13547 482 aaPredicted RBP14.82□□□□□ -0.04
MSH5-216ENST00000484309 UBE3CQ15386 1083 aa14.82□□□□□ -0.04
MSH5-216ENST00000484309 TREML2Q5T2D2 321 aa14.82□□□□□ -0.04
MSH5-216ENST00000484309 FBXO46Q6PJ61 603 aaPredicted RBP14.82□□□□□ -0.04
MSH5-216ENST00000484309 FASTKD5Q7L8L6 764 aaKnown RBP14.82□□□□□ -0.04
MSH5-216ENST00000484309 TTC6Q86TZ1 520 aa14.82□□□□□ -0.04
MSH5-216ENST00000484309 ZNF280CQ8ND82 737 aa14.82□□□□□ -0.04
MSH5-216ENST00000484309 PI4K2BQ8TCG2 481 aa14.82□□□□□ -0.04
MSH5-216ENST00000484309 ARHGAP39Q9C0H5 1083 aa14.82□□□□□ -0.04
MSH5-216ENST00000484309 PUS7LQ9H0K6 701 aaKnown RBP14.82□□□□□ -0.04
MSH5-216ENST00000484309 DCP1AQ9NPI6 582 aaPredicted RBP14.82□□□□□ -0.04
MSH5-216ENST00000484309 ZBTB47Q9UFB7 747 aaPredicted RBP14.82□□□□□ -0.04
MSH5-216ENST00000484309 SERPINB13Q9UIV8 391 aa14.82□□□□□ -0.04
MSH5-216ENST00000484309 ZBTB21Q9ULJ3 1066 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms