RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 CHRDL2Q6WN34 429 aa20.42■□□□□ 0.86
PCGF3-211ENST00000484141 ZHX2Q9Y6X8 837 aa20.42■□□□□ 0.86
PCGF3-211ENST00000484141 FOCADQ5VW36 1801 aa20.41■□□□□ 0.86
PCGF3-211ENST00000484141 PTPRFP10586 1907 aa20.41■□□□□ 0.86
PCGF3-211ENST00000484141 MAPKAPK5Q8IW41 473 aa20.41■□□□□ 0.86
PCGF3-211ENST00000484141 TGFBRAP1Q8WUH2 860 aa20.41■□□□□ 0.86
PCGF3-211ENST00000484141 ATAD5Q96QE3 1844 aa20.41■□□□□ 0.86
PCGF3-211ENST00000484141 IDH1O75874 414 aaKnown RBP20.4■□□□□ 0.86
PCGF3-211ENST00000484141 LACTBP83111 547 aaPredicted RBP20.4■□□□□ 0.86
PCGF3-211ENST00000484141 SHROOM1Q2M3G4 852 aaPredicted RBP20.4■□□□□ 0.86
PCGF3-211ENST00000484141 GPAT2Q6NUI2 795 aa20.4■□□□□ 0.86
PCGF3-211ENST00000484141 RPAP2Q8IXW5 612 aaPredicted RBP20.4■□□□□ 0.86
PCGF3-211ENST00000484141 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.4■□□□□ 0.868e-11■■■■■ 43
PCGF3-211ENST00000484141 PDHXO00330 501 aa20.39■□□□□ 0.85
PCGF3-211ENST00000484141 TLR2O60603 784 aa20.39■□□□□ 0.85
PCGF3-211ENST00000484141 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.85
PCGF3-211ENST00000484141 CYP7A1P22680 504 aa20.39■□□□□ 0.85
PCGF3-211ENST00000484141 CTGFP29279 349 aa20.39■□□□□ 0.85
PCGF3-211ENST00000484141 PPP4CP60510 307 aa20.39■□□□□ 0.85
PCGF3-211ENST00000484141 ERC1Q8IUD2 1116 aa20.39■□□□□ 0.85
PCGF3-211ENST00000484141 MIGA1Q8NAN2 632 aa20.39■□□□□ 0.85
PCGF3-211ENST00000484141 CPA4Q9UI42 421 aa20.39■□□□□ 0.85
PCGF3-211ENST00000484141 AFG3L2Q9Y4W6 797 aa20.39■□□□□ 0.85
PCGF3-211ENST00000484141 JAG1P78504 1218 aa20.38■□□□□ 0.85
PCGF3-211ENST00000484141 MAGEB6Q8N7X4 407 aa20.38■□□□□ 0.85
PCGF3-211ENST00000484141 DPF3Q92784 378 aa20.38■□□□□ 0.85
PCGF3-211ENST00000484141 EDC3Q96F86 508 aaKnown RBP20.38■□□□□ 0.85
PCGF3-211ENST00000484141 PICK1Q9NRD5 415 aa20.38■□□□□ 0.85
PCGF3-211ENST00000484141 SAP30BPQ9UHR5 308 aaKnown RBP20.38■□□□□ 0.85
PCGF3-211ENST00000484141 FLT1P17948 1338 aa20.37■□□□□ 0.85
PCGF3-211ENST00000484141 SZT2Q5T011 3432 aa20.37■□□□□ 0.85
PCGF3-211ENST00000484141 TBC1D12O60347 775 aa20.37■□□□□ 0.85
PCGF3-211ENST00000484141 CTNND1O60716 968 aaKnown RBP20.37■□□□□ 0.85
PCGF3-211ENST00000484141 GNRH1P01148 92 aa20.37■□□□□ 0.85
PCGF3-211ENST00000484141 CYP2C8P10632 490 aa20.37■□□□□ 0.85
PCGF3-211ENST00000484141 ANKRD23Q86SG2 305 aa20.37■□□□□ 0.85
PCGF3-211ENST00000484141 NOL10Q9BSC4 688 aaKnown RBP20.37■□□□□ 0.85
PCGF3-211ENST00000484141 DNAJC18Q9H819 358 aa20.37■□□□□ 0.85
PCGF3-211ENST00000484141 RBM27Q9P2N5 1060 aaKnown RBP20.37■□□□□ 0.85
PCGF3-211ENST00000484141 PALD1Q9ULE6 856 aa20.37■□□□□ 0.85
PCGF3-211ENST00000484141 TRIOBPQ9H2D6 2365 aa20.36■□□□□ 0.85
PCGF3-211ENST00000484141 ADGRA2Q96PE1 1338 aa20.36■□□□□ 0.85
PCGF3-211ENST00000484141 TRIM75PA6NK02 468 aa20.36■□□□□ 0.85
PCGF3-211ENST00000484141 SMARCA5O60264 1052 aaPredicted RBP20.36■□□□□ 0.85
PCGF3-211ENST00000484141 BAG3O95817 575 aa20.36■□□□□ 0.85
PCGF3-211ENST00000484141 PRMT2P55345 433 aa20.36■□□□□ 0.85
PCGF3-211ENST00000484141 PDE3AQ14432 1141 aa20.36■□□□□ 0.85
PCGF3-211ENST00000484141 SLFNL1Q499Z3 407 aa20.36■□□□□ 0.85
PCGF3-211ENST00000484141 HSP90AB4PQ58FF6 505 aa20.36■□□□□ 0.85
PCGF3-211ENST00000484141 C17orf99Q6UX52 265 aa20.36■□□□□ 0.85
PCGF3-211ENST00000484141 KIF1BPQ96EK5 621 aa20.36■□□□□ 0.85
PCGF3-211ENST00000484141 ZCCHC17Q9NP64 241 aaKnown RBP20.36■□□□□ 0.85
PCGF3-211ENST00000484141 COL2A1P02458 1487 aaPredicted RBP20.36■□□□□ 0.85
PCGF3-211ENST00000484141 MYH1P12882 1939 aa20.35■□□□□ 0.85
PCGF3-211ENST00000484141 A0A0G2JLL6 359 aaPredicted RBP20.35■□□□□ 0.85
PCGF3-211ENST00000484141 CXCL11O14625 94 aa20.35■□□□□ 0.85
PCGF3-211ENST00000484141 MAP4K4O95819 1239 aaPredicted RBP20.35■□□□□ 0.85
PCGF3-211ENST00000484141 MTFR1Q15390 333 aa20.35■□□□□ 0.85
PCGF3-211ENST00000484141 GADL1Q6ZQY3 521 aa20.35■□□□□ 0.85
PCGF3-211ENST00000484141 PRRT2Q7Z6L0 340 aaPredicted RBP20.35■□□□□ 0.85
PCGF3-211ENST00000484141 SHISA4Q96DD7 197 aa20.35■□□□□ 0.85
PCGF3-211ENST00000484141 HMMRO75330 724 aa20.34■□□□□ 0.85
PCGF3-211ENST00000484141 CHGBP05060 677 aa20.34■□□□□ 0.85
PCGF3-211ENST00000484141 CLASRPQ8N2M8 674 aaKnown RBP20.34■□□□□ 0.85
PCGF3-211ENST00000484141 DNAJC2Q99543 621 aaKnown RBP20.34■□□□□ 0.85
PCGF3-211ENST00000484141 IFIT2P09913 472 aaKnown RBP20.33■□□□□ 0.85
PCGF3-211ENST00000484141 CAP2P40123 477 aa20.33■□□□□ 0.85
PCGF3-211ENST00000484141 CEP290O15078 2479 aa20.32■□□□□ 0.84
PCGF3-211ENST00000484141 GOLIM4O00461 696 aa20.32■□□□□ 0.84
PCGF3-211ENST00000484141 PLCG2P16885 1265 aa20.32■□□□□ 0.84
PCGF3-211ENST00000484141 EVX2Q03828 476 aa20.32■□□□□ 0.84
PCGF3-211ENST00000484141 SPP2Q13103 211 aa20.32■□□□□ 0.84
PCGF3-211ENST00000484141 TREML2Q5T2D2 321 aa20.32■□□□□ 0.84
PCGF3-211ENST00000484141 NKX2-3Q8TAU0 364 aa20.32■□□□□ 0.84
PCGF3-211ENST00000484141 BOLA2Q9H3K6 86 aa20.32■□□□□ 0.84
PCGF3-211ENST00000484141 PI4KBQ9UBF8 816 aa20.32■□□□□ 0.84
PCGF3-211ENST00000484141 RAB11FIP3O75154 756 aa20.31■□□□□ 0.84
PCGF3-211ENST00000484141 GDF11O95390 407 aa20.31■□□□□ 0.84
PCGF3-211ENST00000484141 PSMC4P43686 418 aa20.31■□□□□ 0.84
PCGF3-211ENST00000484141 MAP3K12Q12852 859 aa20.31■□□□□ 0.84
PCGF3-211ENST00000484141 SRRDQ9UH36 339 aa20.31■□□□□ 0.84
PCGF3-211ENST00000484141 PDE6AP16499 860 aa20.3■□□□□ 0.84
PCGF3-211ENST00000484141 HOXD10P28358 340 aa20.3■□□□□ 0.84
PCGF3-211ENST00000484141 RAET1EQ8TD07 263 aa20.3■□□□□ 0.84
PCGF3-211ENST00000484141 TRIM47Q96LD4 638 aa20.3■□□□□ 0.84
PCGF3-211ENST00000484141 YTHDC1Q96MU7 727 aaKnown RBP20.3■□□□□ 0.84
PCGF3-211ENST00000484141 RIOK1Q9BRS2 568 aaKnown RBP20.3■□□□□ 0.84
PCGF3-211ENST00000484141 HTATIP2Q9BUP3 242 aa20.3■□□□□ 0.84
PCGF3-211ENST00000484141 HERC5Q9UII4 1024 aaKnown RBP20.3■□□□□ 0.84
PCGF3-211ENST00000484141 MGAMO43451 1857 aa20.3■□□□□ 0.84
PCGF3-211ENST00000484141 DLL1O00548 723 aa20.29■□□□□ 0.84
PCGF3-211ENST00000484141 FMNL1O95466 1100 aaPredicted RBP20.29■□□□□ 0.84
PCGF3-211ENST00000484141 BCRP11274 1271 aa20.29■□□□□ 0.84
PCGF3-211ENST00000484141 GRK4P32298 578 aa20.29■□□□□ 0.84
PCGF3-211ENST00000484141 USP5P45974 858 aa20.29■□□□□ 0.84
PCGF3-211ENST00000484141 SLC9C2Q5TAH2 1124 aa20.29■□□□□ 0.84
PCGF3-211ENST00000484141 FASTKD5Q7L8L6 764 aaKnown RBP20.29■□□□□ 0.84
PCGF3-211ENST00000484141 METTL16Q86W50 562 aaKnown RBP20.29■□□□□ 0.84
PCGF3-211ENST00000484141 DHX36Q9H2U1 1008 aaKnown RBP20.29■□□□□ 0.84
PCGF3-211ENST00000484141 LOC285556D6RIA3 1793 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms