RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 OTOP1Q7RTM1 612 aa11.65□□□□□ -0.54
HMG20B-210ENST00000483417 OSBPL3Q9H4L5 887 aa11.65□□□□□ -0.54
HMG20B-210ENST00000483417 PAG1Q9NWQ8 432 aa11.65□□□□□ -0.54
HMG20B-210ENST00000483417 RAI14Q9P0K7 980 aa11.65□□□□□ -0.54
HMG20B-210ENST00000483417 LRP2BPQ9P2M1 347 aa11.65□□□□□ -0.54
HMG20B-210ENST00000483417 IGSF3O75054 1194 aa11.64□□□□□ -0.55
HMG20B-210ENST00000483417 GLRX3O76003 335 aaKnown RBP11.64□□□□□ -0.55
HMG20B-210ENST00000483417 GSPT1P15170 499 aaKnown RBP11.64□□□□□ -0.55
HMG20B-210ENST00000483417 MLLT1Q03111 559 aaPredicted RBP11.64□□□□□ -0.55
HMG20B-210ENST00000483417 CD99L2Q8TCZ2 262 aa11.64□□□□□ -0.55
HMG20B-210ENST00000483417 ZFYVE28Q9HCC9 887 aa11.64□□□□□ -0.55
HMG20B-210ENST00000483417 CXCL11O14625 94 aa11.63□□□□□ -0.55
HMG20B-210ENST00000483417 TLR2O60603 784 aa11.63□□□□□ -0.55
HMG20B-210ENST00000483417 IDH1O75874 414 aaKnown RBP11.63□□□□□ -0.55
HMG20B-210ENST00000483417 DYNLL1P63167 89 aaKnown RBP11.63□□□□□ -0.55
HMG20B-210ENST00000483417 PICALMQ13492 652 aa11.63□□□□□ -0.55
HMG20B-210ENST00000483417 TAF1CQ15572 869 aaPredicted RBP11.63□□□□□ -0.55
HMG20B-210ENST00000483417 GPAT2Q6NUI2 795 aa11.63□□□□□ -0.55
HMG20B-210ENST00000483417 MAGEB6Q8N7X4 407 aa11.63□□□□□ -0.55
HMG20B-210ENST00000483417 ERO1AQ96HE7 468 aa11.63□□□□□ -0.55
HMG20B-210ENST00000483417 PTPN22Q9Y2R2 807 aa11.63□□□□□ -0.55
HMG20B-210ENST00000483417 TRIM17Q9Y577 477 aa11.63□□□□□ -0.55
HMG20B-210ENST00000483417 TCRBV5S4A2TA0A5A2 114 aa11.62□□□□□ -0.55
HMG20B-210ENST00000483417 ERC2O15083 957 aa11.62□□□□□ -0.55
HMG20B-210ENST00000483417 CTNND1O60716 968 aaKnown RBP11.62□□□□□ -0.55
HMG20B-210ENST00000483417 PTPRAP18433 802 aa11.62□□□□□ -0.55
HMG20B-210ENST00000483417 CYP7A1P22680 504 aa11.62□□□□□ -0.55
HMG20B-210ENST00000483417 SOX10P56693 466 aa11.62□□□□□ -0.55
HMG20B-210ENST00000483417 RRP1BQ14684 758 aaKnown RBP11.62□□□□□ -0.55
HMG20B-210ENST00000483417 SLC9C2Q5TAH2 1124 aa11.62□□□□□ -0.55
HMG20B-210ENST00000483417 C17orf99Q6UX52 265 aa11.62□□□□□ -0.55
HMG20B-210ENST00000483417 ANKRD23Q86SG2 305 aa11.62□□□□□ -0.55
HMG20B-210ENST00000483417 ZSCAN29Q8IWY8 852 aaPredicted RBP11.62□□□□□ -0.55
HMG20B-210ENST00000483417 SCYL3Q8IZE3 742 aa11.62□□□□□ -0.55
HMG20B-210ENST00000483417 SH3RF3Q8TEJ3 882 aaPredicted RBP11.62□□□□□ -0.55
HMG20B-210ENST00000483417 RILPL2Q969X0 211 aa11.62□□□□□ -0.55
HMG20B-210ENST00000483417 GPATCH3Q96I76 525 aa11.62□□□□□ -0.55
HMG20B-210ENST00000483417 OSBPL5Q9H0X9 879 aaPredicted RBP11.62□□□□□ -0.55
HMG20B-210ENST00000483417 AFG3L2Q9Y4W6 797 aa11.62□□□□□ -0.55
HMG20B-210ENST00000483417 ZHX2Q9Y6X8 837 aa11.62□□□□□ -0.55
HMG20B-210ENST00000483417 COL2A1P02458 1487 aaPredicted RBP11.62□□□□□ -0.55
HMG20B-210ENST00000483417 PDE6AP16499 860 aa11.61□□□□□ -0.55
HMG20B-210ENST00000483417 SDSP20132 328 aa11.61□□□□□ -0.55
HMG20B-210ENST00000483417 TTC22Q5TAA0 569 aa11.61□□□□□ -0.55
HMG20B-210ENST00000483417 NAA16Q6N069 864 aaPredicted RBP11.61□□□□□ -0.55
HMG20B-210ENST00000483417 METTL16Q86W50 562 aaKnown RBP11.61□□□□□ -0.55
HMG20B-210ENST00000483417 KBTBD3Q8NAB2 608 aa11.61□□□□□ -0.55
HMG20B-210ENST00000483417 MIGA1Q8NAN2 632 aa11.61□□□□□ -0.55
HMG20B-210ENST00000483417 SEC62Q99442 399 aaKnown RBP11.61□□□□□ -0.55
HMG20B-210ENST00000483417 EFCC1Q9HA90 598 aa11.61□□□□□ -0.55
HMG20B-210ENST00000483417 ADGRA2Q96PE1 1338 aa11.6□□□□□ -0.55
HMG20B-210ENST00000483417 ZNF532Q9HCE3 1301 aa11.6□□□□□ -0.55
HMG20B-210ENST00000483417 AK9Q5TCS8 1911 aa11.6□□□□□ -0.55
HMG20B-210ENST00000483417 A0A0G2JLL6 359 aaPredicted RBP11.6□□□□□ -0.55
HMG20B-210ENST00000483417 FAM196BA6NMK8 535 aa11.6□□□□□ -0.55
HMG20B-210ENST00000483417 TRIM6-TRIM34B2RNG4 842 aa11.6□□□□□ -0.55
HMG20B-210ENST00000483417 PDHXO00330 501 aa11.6□□□□□ -0.55
HMG20B-210ENST00000483417 BAG3O95817 575 aa11.6□□□□□ -0.55
HMG20B-210ENST00000483417 ADD2P35612 726 aa11.6□□□□□ -0.55
HMG20B-210ENST00000483417 MAP3K12Q12852 859 aa11.6□□□□□ -0.55
HMG20B-210ENST00000483417 TTF1Q15361 905 aaPredicted RBP11.6□□□□□ -0.55
HMG20B-210ENST00000483417 PRRT2Q7Z6L0 340 aaPredicted RBP11.6□□□□□ -0.55
HMG20B-210ENST00000483417 TEX11Q8IYF3 940 aa11.6□□□□□ -0.55
HMG20B-210ENST00000483417 OSBP2Q969R2 916 aa11.6□□□□□ -0.55
HMG20B-210ENST00000483417 PUS7LQ9H0K6 701 aaKnown RBP11.6□□□□□ -0.55
HMG20B-210ENST00000483417 AATFQ9NY61 560 aaKnown RBP eCLIP11.6□□□□□ -0.55
HMG20B-210ENST00000483417 DOCK2Q92608 1830 aa11.6□□□□□ -0.55
HMG20B-210ENST00000483417 RNF113AO15541 343 aaKnown RBP11.59□□□□□ -0.55
HMG20B-210ENST00000483417 CTGFP29279 349 aa11.59□□□□□ -0.55
HMG20B-210ENST00000483417 ARMC5Q96C12 935 aa11.59□□□□□ -0.55
HMG20B-210ENST00000483417 EVI5LQ96CN4 794 aa11.59□□□□□ -0.55
HMG20B-210ENST00000483417 ARHGAP39Q9C0H5 1083 aa11.59□□□□□ -0.55
HMG20B-210ENST00000483417 PICK1Q9NRD5 415 aa11.59□□□□□ -0.55
HMG20B-210ENST00000483417 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.59□□□□□ -0.55
HMG20B-210ENST00000483417 PI4KBQ9UBF8 816 aa11.59□□□□□ -0.55
HMG20B-210ENST00000483417 PRKAB2O43741 272 aa11.58□□□□□ -0.56
HMG20B-210ENST00000483417 BCRP11274 1271 aa11.58□□□□□ -0.56
HMG20B-210ENST00000483417 PLCG2P16885 1265 aa11.58□□□□□ -0.56
HMG20B-210ENST00000483417 CAP2P40123 477 aa11.58□□□□□ -0.56
HMG20B-210ENST00000483417 JAG1P78504 1218 aa11.58□□□□□ -0.56
HMG20B-210ENST00000483417 LACTBP83111 547 aaPredicted RBP11.58□□□□□ -0.56
HMG20B-210ENST00000483417 FASTKD5Q7L8L6 764 aaKnown RBP11.58□□□□□ -0.56
HMG20B-210ENST00000483417 CCDC84Q86UT8 332 aaPredicted RBP11.58□□□□□ -0.56
HMG20B-210ENST00000483417 FOXP4Q8IVH2 680 aaPredicted RBP11.58□□□□□ -0.56
HMG20B-210ENST00000483417 TGFBRAP1Q8WUH2 860 aa11.58□□□□□ -0.56
HMG20B-210ENST00000483417 FAM227BQ96M60 508 aa11.58□□□□□ -0.56
HMG20B-210ENST00000483417 RIOK1Q9BRS2 568 aaKnown RBP11.58□□□□□ -0.56
HMG20B-210ENST00000483417 FSD1Q9BTV5 496 aa11.58□□□□□ -0.56
HMG20B-210ENST00000483417 IL25Q9H293 177 aa11.58□□□□□ -0.56
HMG20B-210ENST00000483417 DHX36Q9H2U1 1008 aaKnown RBP11.58□□□□□ -0.56
HMG20B-210ENST00000483417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.58□□□□□ -0.56
HMG20B-210ENST00000483417 CPA4Q9UI42 421 aa11.58□□□□□ -0.56
HMG20B-210ENST00000483417 HERC5Q9UII4 1024 aaKnown RBP11.58□□□□□ -0.56
HMG20B-210ENST00000483417 SLC45A1Q9Y2W3 748 aa11.58□□□□□ -0.56
HMG20B-210ENST00000483417 PHIPQ8WWQ0 1821 aa11.58□□□□□ -0.56
HMG20B-210ENST00000483417 HTTP42858 3142 aa11.58□□□□□ -0.56
HMG20B-210ENST00000483417 M0R2C6 588 aa11.57□□□□□ -0.56
HMG20B-210ENST00000483417 ARHGEF6Q15052 776 aa11.57□□□□□ -0.56
HMG20B-210ENST00000483417 UBE3CQ15386 1083 aa11.57□□□□□ -0.56
HMG20B-210ENST00000483417 TMED8Q6PL24 325 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms