RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 GLRX3O76003 335 aaKnown RBP18.28■□□□□ 0.52
COL16A1-213ENST00000482910 SNAPC2Q13487 334 aa18.28■□□□□ 0.52
COL16A1-213ENST00000482910 ANKRD45Q5TZF3 282 aa18.28■□□□□ 0.52
COL16A1-213ENST00000482910 FOXP4Q8IVH2 680 aaPredicted RBP18.28■□□□□ 0.52
COL16A1-213ENST00000482910 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.28■□□□□ 0.52
COL16A1-213ENST00000482910 ZCCHC17Q9NP64 241 aaKnown RBP18.28■□□□□ 0.52
COL16A1-213ENST00000482910 KCNH4Q9UQ05 1017 aa18.28■□□□□ 0.52
COL16A1-213ENST00000482910 HLA-DOAP06340 250 aa18.27■□□□□ 0.52
COL16A1-213ENST00000482910 CETPP11597 493 aa18.27■□□□□ 0.52
COL16A1-213ENST00000482910 MX1P20591 662 aa18.27■□□□□ 0.52
COL16A1-213ENST00000482910 USP5P45974 858 aa18.27■□□□□ 0.52
COL16A1-213ENST00000482910 KBTBD3Q8NAB2 608 aa18.27■□□□□ 0.52
COL16A1-213ENST00000482910 PI4K2BQ8TCG2 481 aa18.27■□□□□ 0.52
COL16A1-213ENST00000482910 BRI3BPQ8WY22 251 aa18.27■□□□□ 0.52
COL16A1-213ENST00000482910 CRNKL1Q9BZJ0 848 aaKnown RBP18.27■□□□□ 0.52
COL16A1-213ENST00000482910 PICK1Q9NRD5 415 aa18.27■□□□□ 0.52
COL16A1-213ENST00000482910 DDX60LQ5H9U9 1706 aaKnown RBP18.26■□□□□ 0.51
COL16A1-213ENST00000482910 CCL15-CCL14A0A0B4J2E2 113 aa18.26■□□□□ 0.51
COL16A1-213ENST00000482910 CXCL11O14625 94 aa18.26■□□□□ 0.51
COL16A1-213ENST00000482910 CCL15Q16663 113 aa18.26■□□□□ 0.51
COL16A1-213ENST00000482910 PTPN18Q99952 460 aa18.26■□□□□ 0.51
COL16A1-213ENST00000482910 NAV1Q8NEY1 1877 aa18.25■□□□□ 0.51
COL16A1-213ENST00000482910 TBC1D8O95759 1140 aa18.25■□□□□ 0.51
COL16A1-213ENST00000482910 PTPRAP18433 802 aa18.25■□□□□ 0.51
COL16A1-213ENST00000482910 LRRFIP1Q32MZ4 808 aaKnown RBP18.25■□□□□ 0.51
COL16A1-213ENST00000482910 TSHZ3Q63HK5 1081 aa18.25■□□□□ 0.51
COL16A1-213ENST00000482910 OTUD7AQ8TE49 926 aaPredicted RBP18.25■□□□□ 0.51
COL16A1-213ENST00000482910 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
COL16A1-213ENST00000482910 EHD4Q9H223 541 aa18.25■□□□□ 0.51
COL16A1-213ENST00000482910 GINM1Q9NU53 330 aa18.25■□□□□ 0.51
COL16A1-213ENST00000482910 STAP2Q9UGK3 403 aa18.25■□□□□ 0.51
COL16A1-213ENST00000482910 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
COL16A1-213ENST00000482910 PHIPQ8WWQ0 1821 aa18.25■□□□□ 0.51
COL16A1-213ENST00000482910 ATAD5Q96QE3 1844 aa18.25■□□□□ 0.51
COL16A1-213ENST00000482910 ZFYP08048 801 aaPredicted RBP18.24■□□□□ 0.51
COL16A1-213ENST00000482910 SLURP2P0DP57 97 aa18.24■□□□□ 0.51
COL16A1-213ENST00000482910 CAP2P40123 477 aa18.24■□□□□ 0.51
COL16A1-213ENST00000482910 TTC6Q86TZ1 520 aa18.24■□□□□ 0.51
COL16A1-213ENST00000482910 TAOK2Q9UL54 1235 aa18.24■□□□□ 0.51
COL16A1-213ENST00000482910 PTPRFP10586 1907 aa18.23■□□□□ 0.51
COL16A1-213ENST00000482910 FAM196BA6NMK8 535 aa18.23■□□□□ 0.51
COL16A1-213ENST00000482910 GPR25O00155 361 aa18.23■□□□□ 0.51
COL16A1-213ENST00000482910 IGHDP01880 384 aa18.23■□□□□ 0.51
COL16A1-213ENST00000482910 LCORLQ8N3X6 602 aa18.23■□□□□ 0.51
COL16A1-213ENST00000482910 CRACR2BQ8N4Y2 399 aaPredicted RBP18.23■□□□□ 0.51
COL16A1-213ENST00000482910 TRIM34Q9BYJ4 488 aa18.23■□□□□ 0.51
COL16A1-213ENST00000482910 DNAJC18Q9H819 358 aa18.23■□□□□ 0.51
COL16A1-213ENST00000482910 ATP8A2Q9NTI2 1148 aa18.23■□□□□ 0.51
COL16A1-213ENST00000482910 SAP30BPQ9UHR5 308 aaKnown RBP18.23■□□□□ 0.51
COL16A1-213ENST00000482910 AFG3L2Q9Y4W6 797 aa18.23■□□□□ 0.51
COL16A1-213ENST00000482910 MBD4O95243 580 aa18.22■□□□□ 0.51
COL16A1-213ENST00000482910 PDE1AP54750 535 aa18.22■□□□□ 0.51
COL16A1-213ENST00000482910 APPBP2Q92624 585 aa18.22■□□□□ 0.51
COL16A1-213ENST00000482910 DCP1AQ9NPI6 582 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-213ENST00000482910 SERPINB13Q9UIV8 391 aa18.22■□□□□ 0.51
COL16A1-213ENST00000482910 ZHX2Q9Y6X8 837 aa18.22■□□□□ 0.51
COL16A1-213ENST00000482910 BTBD19C9JJ37 291 aa18.21■□□□□ 0.51
COL16A1-213ENST00000482910 RNF113AO15541 343 aaKnown RBP18.21■□□□□ 0.51
COL16A1-213ENST00000482910 ASNSP08243 561 aa18.21■□□□□ 0.51
COL16A1-213ENST00000482910 ANKRD23Q86SG2 305 aa18.21■□□□□ 0.51
COL16A1-213ENST00000482910 TICAM2Q86XR7 235 aa18.21■□□□□ 0.51
COL16A1-213ENST00000482910 FAM43AQ8N2R8 423 aa18.21■□□□□ 0.51
COL16A1-213ENST00000482910 ZNF296Q8WUU4 475 aaPredicted RBP18.21■□□□□ 0.51
COL16A1-213ENST00000482910 ARMT1Q9H993 441 aa18.21■□□□□ 0.51
COL16A1-213ENST00000482910 A0A0G2JLL6 359 aaPredicted RBP18.2■□□□□ 0.5
COL16A1-213ENST00000482910 FKTNO75072 461 aa18.2■□□□□ 0.5
COL16A1-213ENST00000482910 NUCB1Q02818 461 aa18.2■□□□□ 0.5
COL16A1-213ENST00000482910 CRHR2Q13324 411 aa18.2■□□□□ 0.5
COL16A1-213ENST00000482910 MOGSQ13724 837 aa18.2■□□□□ 0.5
COL16A1-213ENST00000482910 RRP1BQ14684 758 aaKnown RBP18.2■□□□□ 0.5
COL16A1-213ENST00000482910 SLFNL1Q499Z3 407 aa18.2■□□□□ 0.5
COL16A1-213ENST00000482910 TATDN1Q6P1N9 297 aa18.2■□□□□ 0.5
COL16A1-213ENST00000482910 FASTKD5Q7L8L6 764 aaKnown RBP18.2■□□□□ 0.5
COL16A1-213ENST00000482910 PRRT2Q7Z6L0 340 aaPredicted RBP18.2■□□□□ 0.5
COL16A1-213ENST00000482910 CHD1LQ86WJ1 897 aa18.2■□□□□ 0.5
COL16A1-213ENST00000482910 SDR42E1Q8WUS8 393 aa18.2■□□□□ 0.5
COL16A1-213ENST00000482910 LNPKQ9C0E8 428 aa18.2■□□□□ 0.5
COL16A1-213ENST00000482910 PUS7LQ9H0K6 701 aaKnown RBP18.2■□□□□ 0.5
COL16A1-213ENST00000482910 R3HDMLQ9H3Y0 253 aa18.2■□□□□ 0.5
COL16A1-213ENST00000482910 ZFYVE28Q9HCC9 887 aa18.2■□□□□ 0.5
COL16A1-213ENST00000482910 USP17L5A8MUK1 530 aa18.19■□□□□ 0.5
COL16A1-213ENST00000482910 CHGBP05060 677 aa18.19■□□□□ 0.5
COL16A1-213ENST00000482910 POLR3DP05423 398 aaPredicted RBP18.19■□□□□ 0.5
COL16A1-213ENST00000482910 GABPAQ06546 454 aa18.19■□□□□ 0.5
COL16A1-213ENST00000482910 TAF1CQ15572 869 aaPredicted RBP18.19■□□□□ 0.5
COL16A1-213ENST00000482910 AS3MTQ9HBK9 375 aa18.19■□□□□ 0.5
COL16A1-213ENST00000482910 MCM9Q9NXL9 1143 aa18.19■□□□□ 0.5
COL16A1-213ENST00000482910 BAZ2AQ9UIF9 1905 aaKnown RBP18.18■□□□□ 0.5
COL16A1-213ENST00000482910 PLCD1P51178 756 aa18.18■□□□□ 0.5
COL16A1-213ENST00000482910 CTU1Q7Z7A3 348 aaKnown RBP18.18■□□□□ 0.5
COL16A1-213ENST00000482910 ZNF280CQ8ND82 737 aa18.18■□□□□ 0.5
COL16A1-213ENST00000482910 OSBP2Q969R2 916 aa18.18■□□□□ 0.5
COL16A1-213ENST00000482910 DDRGK1Q96HY6 314 aa18.18■□□□□ 0.5
COL16A1-213ENST00000482910 STRBPQ96SI9 672 aaKnown RBP18.18■□□□□ 0.5
COL16A1-213ENST00000482910 WDR18Q9BV38 432 aa18.18■□□□□ 0.5
COL16A1-213ENST00000482910 OSBPL3Q9H4L5 887 aa18.18■□□□□ 0.5
COL16A1-213ENST00000482910 SLC45A1Q9Y2W3 748 aa18.18■□□□□ 0.5
COL16A1-213ENST00000482910 B4GALNT3Q6L9W6 998 aa18.17■□□□□ 0.5
COL16A1-213ENST00000482910 GIMAP6Q6P9H5 292 aa18.17■□□□□ 0.5
COL16A1-213ENST00000482910 EVI5LQ96CN4 794 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms