RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 CSF1RP07333 972 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 METTL24Q5JXM2 366 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 PPM1EQ8WY54 764 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 UTP14AQ9BVJ6 771 aaKnown RBP14.17□□□□□ -0.14
CCDC78-213ENST00000482878 FANCLQ9NW38 375 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 RANBP6O60518 1105 aaKnown RBP14.17□□□□□ -0.14
CCDC78-213ENST00000482878 BMP6P22004 513 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 DHX8Q14562 1220 aaKnown RBP14.17□□□□□ -0.14
CCDC78-213ENST00000482878 NTRK3Q16288 839 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 BICDL1Q6ZP65 573 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 MICALL1Q8N3F8 863 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 JMYQ8N9B5 988 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.17□□□□□ -0.146e-8■■■■■ 46.2
CCDC78-213ENST00000482878 PIH1D3Q9NQM4 214 aaKnown RBP14.17□□□□□ -0.14
CCDC78-213ENST00000482878 SLAIN2Q9P270 581 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 RIPOR2Q9Y4F9 1068 aa14.17□□□□□ -0.14
CCDC78-213ENST00000482878 FAM237AA0A1B0GTK4 181 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 EFCAB8A8MWE9 144 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 FOXN1O15353 648 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 TADA3O75528 432 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 PDE4BQ07343 736 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 SPECC1Q5M775 1068 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 VSTM4Q8IW00 320 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 FAM217BQ9NTX9 383 aaPredicted RBP14.16□□□□□ -0.14
CCDC78-213ENST00000482878 PCDHA5Q9Y5H7 936 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 RIC1Q4ADV7 1423 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 ADAMTSL3P82987 1691 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 IDH1O75874 414 aaKnown RBP14.16□□□□□ -0.14
CCDC78-213ENST00000482878 CDKL5O76039 1030 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 PCCAP05165 728 aaPredicted RBP14.16□□□□□ -0.14
CCDC78-213ENST00000482878 HSP90AA4PQ58FG1 418 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 INTS13Q9NVM9 706 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 ATP8B1O43520 1251 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 LDHAL6AQ6ZMR3 332 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 IGDCC4Q8TDY8 1250 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 CCDC102AQ96A19 550 aa14.16□□□□□ -0.14
CCDC78-213ENST00000482878 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.16□□□□□ -0.14
CCDC78-213ENST00000482878 SRRTQ9BXP5 876 aaKnown RBP14.16□□□□□ -0.14
CCDC78-213ENST00000482878 ABCC12Q96J65 1359 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 PATL2C9JE40 543 aaKnown RBP14.15□□□□□ -0.14
CCDC78-213ENST00000482878 CBFA2T2O43439 604 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 CNNM3Q8NE01 707 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 KCNH3Q9ULD8 1083 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 UBN2Q6ZU65 1347 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 PHLPP2Q6ZVD8 1323 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 TNS3Q68CZ2 1445 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 H3BQF6 201 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 ZBTB43O43298 467 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 TUBB4AP04350 444 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 CCDC172P0C7W6 258 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 TOP1P11387 765 aaKnown RBP14.15□□□□□ -0.14
CCDC78-213ENST00000482878 IARSP41252 1262 aaKnown RBP14.15□□□□□ -0.14
CCDC78-213ENST00000482878 MNAT1P51948 309 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 KCNQ4P56696 695 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 TRIM28Q13263 835 aaKnown RBP14.15□□□□□ -0.14
CCDC78-213ENST00000482878 HSP90B2PQ58FF3 399 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 ZBTB38Q8NAP3 1195 aaPredicted RBP14.15□□□□□ -0.14
CCDC78-213ENST00000482878 PLA2G12BQ9BX93 195 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 GREM2Q9H772 168 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 PDE11AQ9HCR9 933 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.15□□□□□ -0.14
CCDC78-213ENST00000482878 CNNM1Q9NRU3 951 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 CEP83Q9Y592 693 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 ZNF532Q9HCE3 1301 aa14.15□□□□□ -0.14
CCDC78-213ENST00000482878 CCDC102BQ68D86 513 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 CPLX2Q6PUV4 134 aaKnown RBP14.14□□□□□ -0.15
CCDC78-213ENST00000482878 OLFM4Q6UX06 510 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 NFXL1Q6ZNB6 911 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 ZNF622Q969S3 477 aaKnown RBP eCLIP14.14□□□□□ -0.15
CCDC78-213ENST00000482878 LY9Q9HBG7 655 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 ASAP1Q9ULH1 1129 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 IQSEC3Q9UPP2 1182 aaPredicted RBP14.14□□□□□ -0.15
CCDC78-213ENST00000482878 C4AP0C0L4 1744 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 C4BP0C0L5 1744 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 CCP110O43303 1012 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 ITGA6P23229 1130 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 GNG11P61952 73 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 TMEM139Q8IV31 216 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 DNAJC10Q8IXB1 793 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 PARD6BQ9BYG5 372 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 WWC3Q9ULE0 1092 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 GOLGA8AA7E2F4 631 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 CUTAO60888 179 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 PPP2R3AQ06190 1150 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 CXorf56Q9H5V9 222 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 SPATA31A3Q5VYP0 1347 aa14.14□□□□□ -0.15
CCDC78-213ENST00000482878 GRIN1Q05586 938 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 NKX1-1Q15270 411 aaPredicted RBP14.13□□□□□ -0.15
CCDC78-213ENST00000482878 LONRF2Q1L5Z9 754 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 ANKRD20A12PQ8NF67 263 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 IL2RBP14784 551 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 MDM2Q00987 491 aaPredicted RBP14.13□□□□□ -0.15
CCDC78-213ENST00000482878 TRIM29Q14134 588 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 UBE3CQ15386 1083 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 TMEM67Q5HYA8 995 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 GPR161Q8N6U8 529 aaKnown RBP14.13□□□□□ -0.15
CCDC78-213ENST00000482878 TTLL11Q8NHH1 800 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 TMEM87BQ96K49 555 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 SLC26A6Q9BXS9 759 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 DDX60Q8IY21 1712 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms