RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 MAP3K10Q02779 954 aa9.52□□□□□ -0.89
CCNC-204ENST00000482541 MLLT1Q03111 559 aaPredicted RBP9.52□□□□□ -0.89
CCNC-204ENST00000482541 CRHR2Q13324 411 aa9.52□□□□□ -0.89
CCNC-204ENST00000482541 PPIL2Q13356 520 aa9.52□□□□□ -0.89
CCNC-204ENST00000482541 CCL15Q16663 113 aa9.52□□□□□ -0.89
CCNC-204ENST00000482541 BRI3BPQ8WY22 251 aa9.52□□□□□ -0.89
CCNC-204ENST00000482541 ERO1AQ96HE7 468 aa9.52□□□□□ -0.89
CCNC-204ENST00000482541 ZNF512BQ96KM6 892 aaPredicted RBP9.52□□□□□ -0.89
CCNC-204ENST00000482541 MROH7-TTC4A0A0A0MT08 1334 aa9.52□□□□□ -0.89
CCNC-204ENST00000482541 WDHD1O75717 1129 aaPredicted RBP9.51□□□□□ -0.89
CCNC-204ENST00000482541 INPP5BP32019 993 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 MCAMP43121 646 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 SP3Q02447 781 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 SNAPC2Q13487 334 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 NOL9Q5SY16 702 aaKnown RBP9.51□□□□□ -0.89
CCNC-204ENST00000482541 TBC1D9Q6ZT07 1266 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 ZFPM1Q8IX07 1006 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 NSUN4Q96CB9 384 aaKnown RBP9.51□□□□□ -0.89
CCNC-204ENST00000482541 C1orf115Q9H7X2 142 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 ZFYVE28Q9HCC9 887 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 LRP2BPQ9P2M1 347 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 HPS5Q9UPZ3 1129 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 MLLT3P42568 568 aaPredicted RBP9.51□□□□□ -0.89
CCNC-204ENST00000482541 RHBDL3P58872 404 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 ARHGEF6Q15052 776 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 TAF1CQ15572 869 aaPredicted RBP9.51□□□□□ -0.89
CCNC-204ENST00000482541 TTC39AQ5SRH9 613 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 CEP85Q6P2H3 762 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 PI16Q6UXB8 463 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 ZSCAN29Q8IWY8 852 aaPredicted RBP9.51□□□□□ -0.89
CCNC-204ENST00000482541 PLPP6Q8IY26 295 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 FAM43AQ8N2R8 423 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 ZNF384Q8TF68 577 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 DBNDD2Q9BQY9 259 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 CHMP4BQ9H444 224 aaKnown RBP9.51□□□□□ -0.89
CCNC-204ENST00000482541 RAI14Q9P0K7 980 aa9.51□□□□□ -0.89
CCNC-204ENST00000482541 COLQQ9Y215 455 aaPredicted RBP9.51□□□□□ -0.89
CCNC-204ENST00000482541 PHF20L1A8MW92 1017 aa9.5□□□□□ -0.89
CCNC-204ENST00000482541 TBC1D12O60347 775 aa9.5□□□□□ -0.89
CCNC-204ENST00000482541 TLR2O60603 784 aa9.5□□□□□ -0.89
CCNC-204ENST00000482541 SEC24BO95487 1268 aa9.5□□□□□ -0.89
CCNC-204ENST00000482541 HSP90AB4PQ58FF6 505 aa9.5□□□□□ -0.89
CCNC-204ENST00000482541 ERC1Q8IUD2 1116 aa9.5□□□□□ -0.89
CCNC-204ENST00000482541 RPAP2Q8IXW5 612 aaPredicted RBP9.5□□□□□ -0.89
CCNC-204ENST00000482541 PANK1Q8TE04 598 aa9.5□□□□□ -0.89
CCNC-204ENST00000482541 DDX19BQ9UMR2 479 aa9.5□□□□□ -0.89
CCNC-204ENST00000482541 KCNH4Q9UQ05 1017 aa9.5□□□□□ -0.89
CCNC-204ENST00000482541 TRIM17Q9Y577 477 aa9.5□□□□□ -0.89
CCNC-204ENST00000482541 RFX7Q2KHR2 1363 aa9.49□□□□□ -0.89
CCNC-204ENST00000482541 DDTLA6NHG4 134 aaPredicted RBP9.49□□□□□ -0.89
CCNC-204ENST00000482541 BTBD19C9JJ37 291 aa9.49□□□□□ -0.89
CCNC-204ENST00000482541 CXCL11O14625 94 aa9.49□□□□□ -0.89
CCNC-204ENST00000482541 BAG3O95817 575 aa9.49□□□□□ -0.89
CCNC-204ENST00000482541 SH3BP5LQ7L8J4 393 aa9.49□□□□□ -0.89
CCNC-204ENST00000482541 OTOP1Q7RTM1 612 aa9.49□□□□□ -0.89
CCNC-204ENST00000482541 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.49□□□□□ -0.89
CCNC-204ENST00000482541 NOL10Q9BSC4 688 aaKnown RBP9.49□□□□□ -0.89
CCNC-204ENST00000482541 DDX4Q9NQI0 724 aaKnown RBP9.49□□□□□ -0.89
CCNC-204ENST00000482541 ATRNL1Q5VV63 1379 aa9.49□□□□□ -0.89
CCNC-204ENST00000482541 CTNND1O60716 968 aaKnown RBP9.48□□□□□ -0.89
CCNC-204ENST00000482541 CYP2E1P05181 493 aaPredicted RBP9.48□□□□□ -0.89
CCNC-204ENST00000482541 PPP4CP60510 307 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 PICALMQ13492 652 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 NAA16Q6N069 864 aaPredicted RBP9.48□□□□□ -0.89
CCNC-204ENST00000482541 TMED8Q6PL24 325 aaPredicted RBP9.48□□□□□ -0.89
CCNC-204ENST00000482541 ANKRD23Q86SG2 305 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 SCYL3Q8IZE3 742 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 EAF2Q96CJ1 260 aaPredicted RBP9.48□□□□□ -0.89
CCNC-204ENST00000482541 EFCC1Q9HA90 598 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 DBNLQ9UJU6 430 aaKnown RBP9.48□□□□□ -0.89
CCNC-204ENST00000482541 RCAN3Q9UKA8 241 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 PTPN22Q9Y2R2 807 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 PTPRAP18433 802 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 TMEM92Q6UXU6 159 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 CD99L2Q8TCZ2 262 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 CCDC8Q9H0W5 538 aaPredicted RBP9.48□□□□□ -0.89
CCNC-204ENST00000482541 DHX36Q9H2U1 1008 aaKnown RBP9.48□□□□□ -0.89
CCNC-204ENST00000482541 PICK1Q9NRD5 415 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 SNRKQ9NRH2 765 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 ZBTB40Q9NUA8 1239 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 ZHX2Q9Y6X8 837 aa9.48□□□□□ -0.89
CCNC-204ENST00000482541 COL2A1P02458 1487 aaPredicted RBP9.48□□□□□ -0.89
CCNC-204ENST00000482541 DOCK2Q92608 1830 aa9.47□□□□□ -0.89
CCNC-204ENST00000482541 HMMRO75330 724 aa9.47□□□□□ -0.89
CCNC-204ENST00000482541 GNRH1P01148 92 aa9.47□□□□□ -0.89
CCNC-204ENST00000482541 ZAP70P43403 619 aa9.47□□□□□ -0.89
CCNC-204ENST00000482541 SOX10P56693 466 aa9.47□□□□□ -0.89
CCNC-204ENST00000482541 KIF22Q14807 665 aa9.47□□□□□ -0.89
CCNC-204ENST00000482541 FASTKD5Q7L8L6 764 aaKnown RBP9.47□□□□□ -0.89
CCNC-204ENST00000482541 SLC39A7Q92504 469 aa9.47□□□□□ -0.89
CCNC-204ENST00000482541 OSBPL5Q9H0X9 879 aaPredicted RBP9.47□□□□□ -0.89
CCNC-204ENST00000482541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.47□□□□□ -0.89
CCNC-204ENST00000482541 PI4KBQ9UBF8 816 aa9.47□□□□□ -0.89
CCNC-204ENST00000482541 EXOC6BQ9Y2D4 811 aa9.47□□□□□ -0.89
CCNC-204ENST00000482541 AFG3L2Q9Y4W6 797 aa9.47□□□□□ -0.89
CCNC-204ENST00000482541 SPDYE16A6NNV3 312 aaPredicted RBP9.46□□□□□ -0.89
CCNC-204ENST00000482541 PDHXO00330 501 aa9.46□□□□□ -0.89
CCNC-204ENST00000482541 PDE3AQ14432 1141 aa9.46□□□□□ -0.89
CCNC-204ENST00000482541 C17orf99Q6UX52 265 aa9.46□□□□□ -0.89
CCNC-204ENST00000482541 CERS3Q8IU89 383 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms