RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 SNAP23O00161 211 aa17.19■□□□□ 0.34
ATG4B-220ENST00000482507 GSDMDP57764 484 aa17.19■□□□□ 0.34
ATG4B-220ENST00000482507 STRBPQ96SI9 672 aaKnown RBP17.19■□□□□ 0.34
ATG4B-220ENST00000482507 LY9Q9HBG7 655 aa17.19■□□□□ 0.34
ATG4B-220ENST00000482507 EPB41L4AQ9HCS5 686 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-220ENST00000482507 IMPACTQ9P2X3 320 aa17.19■□□□□ 0.34
ATG4B-220ENST00000482507 ZNF215Q9UL58 517 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-220ENST00000482507 ECM29Q5VYK3 1845 aa17.18■□□□□ 0.34
ATG4B-220ENST00000482507 LMOD1P29536 600 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-220ENST00000482507 ZRSR1Q15695 479 aaKnown RBP17.18■□□□□ 0.34
ATG4B-220ENST00000482507 MSL1Q68DK7 614 aa17.18■□□□□ 0.34
ATG4B-220ENST00000482507 NPHP1O15259 732 aa17.18■□□□□ 0.34
ATG4B-220ENST00000482507 ARID4AP29374 1257 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-220ENST00000482507 SYKP43405 635 aa17.18■□□□□ 0.34
ATG4B-220ENST00000482507 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.18■□□□□ 0.342e-8■■□□□ 13.7
ATG4B-220ENST00000482507 TUBE1Q9UJT0 475 aa17.18■□□□□ 0.34
ATG4B-220ENST00000482507 V9GYY5 206 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-220ENST00000482507 PDE8AO60658 829 aa17.17■□□□□ 0.34
ATG4B-220ENST00000482507 CTDSPL2Q05D32 466 aa17.17■□□□□ 0.34
ATG4B-220ENST00000482507 PNOCQ13519 176 aa17.17■□□□□ 0.34
ATG4B-220ENST00000482507 TTF1Q15361 905 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-220ENST00000482507 PNPLA7Q6ZV29 1317 aa17.17■□□□□ 0.34
ATG4B-220ENST00000482507 TNS1Q9HBL0 1735 aaKnown RBP17.17■□□□□ 0.34
ATG4B-220ENST00000482507 SLC15A2Q16348 729 aa17.17■□□□□ 0.34
ATG4B-220ENST00000482507 DPF2Q92785 391 aa17.17■□□□□ 0.34
ATG4B-220ENST00000482507 SEC31BQ9NQW1 1179 aa17.17■□□□□ 0.34
ATG4B-220ENST00000482507 ZBTB43O43298 467 aa17.16■□□□□ 0.34
ATG4B-220ENST00000482507 FANCCQ00597 558 aa17.16■□□□□ 0.34
ATG4B-220ENST00000482507 FOXP4Q8IVH2 680 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-220ENST00000482507 TIGD1Q96MW7 591 aa17.16■□□□□ 0.34
ATG4B-220ENST00000482507 PPP6R2O75170 966 aa17.16■□□□□ 0.34
ATG4B-220ENST00000482507 FGFR2P21802 821 aa17.16■□□□□ 0.34
ATG4B-220ENST00000482507 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.16■□□□□ 0.34
ATG4B-220ENST00000482507 FAM237AA0A1B0GTK4 181 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 GOLGA8AA7E2F4 631 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 GUCY1A2P33402 732 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 TMEM67Q5HYA8 995 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 RESP18Q5W5W9 173 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 TPTE2Q6XPS3 522 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 SGMS1Q86VZ5 419 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 METTL16Q86W50 562 aaKnown RBP17.15■□□□□ 0.34
ATG4B-220ENST00000482507 RGS22Q8NE09 1264 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 PPP1R13BQ96KQ4 1090 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 ZSWIM5Q9P217 1185 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 IKBKBO14920 756 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 CDKL5O76039 1030 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 IARSP41252 1262 aaKnown RBP17.15■□□□□ 0.34
ATG4B-220ENST00000482507 DMTNQ08495 405 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 PTPN21Q16825 1174 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 LONRF3Q496Y0 759 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 AIDAQ96BJ3 306 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 TMEM87BQ96K49 555 aa17.15■□□□□ 0.34
ATG4B-220ENST00000482507 MYH3P11055 1940 aa17.14■□□□□ 0.33
ATG4B-220ENST00000482507 FOXN1O15353 648 aa17.14■□□□□ 0.33
ATG4B-220ENST00000482507 MBD4O95243 580 aa17.14■□□□□ 0.33
ATG4B-220ENST00000482507 IFNL3Q8IZI9 196 aa17.14■□□□□ 0.33
ATG4B-220ENST00000482507 CCDC150Q8NCX0 1101 aa17.14■□□□□ 0.33
ATG4B-220ENST00000482507 ARMT1Q9H993 441 aa17.14■□□□□ 0.33
ATG4B-220ENST00000482507 PRKAB2O43741 272 aa17.13■□□□□ 0.33
ATG4B-220ENST00000482507 BMP6P22004 513 aa17.13■□□□□ 0.33
ATG4B-220ENST00000482507 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
ATG4B-220ENST00000482507 DDR1Q08345 913 aa17.13■□□□□ 0.33
ATG4B-220ENST00000482507 GNL2Q13823 731 aaKnown RBP17.13■□□□□ 0.33
ATG4B-220ENST00000482507 RASGRF1Q13972 1273 aa17.13■□□□□ 0.33
ATG4B-220ENST00000482507 ALX1Q15699 326 aa17.13■□□□□ 0.33
ATG4B-220ENST00000482507 SPECC1Q5M775 1068 aa17.13■□□□□ 0.33
ATG4B-220ENST00000482507 MAGEB6Q8N7X4 407 aa17.13■□□□□ 0.33
ATG4B-220ENST00000482507 SLC26A6Q9BXS9 759 aa17.13■□□□□ 0.33
ATG4B-220ENST00000482507 STK32BQ9NY57 414 aa17.13■□□□□ 0.33
ATG4B-220ENST00000482507 TM4SF1P30408 202 aa17.13■□□□□ 0.33
ATG4B-220ENST00000482507 PUM3Q15397 648 aaKnown RBP17.13■□□□□ 0.33
ATG4B-220ENST00000482507 SPATA5Q8NB90 893 aa17.13■□□□□ 0.33
ATG4B-220ENST00000482507 LPIN2Q92539 896 aa17.13■□□□□ 0.33
ATG4B-220ENST00000482507 UBR3Q6ZT12 1888 aa17.13■□□□□ 0.33
ATG4B-220ENST00000482507 PATL2C9JE40 543 aaKnown RBP17.12■□□□□ 0.33
ATG4B-220ENST00000482507 SERPINB2P05120 415 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 TOB1P50616 345 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-220ENST00000482507 GRIN1Q05586 938 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 PDE4BQ07343 736 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 LRRN4CLQ8ND94 238 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 KIF18AQ8NI77 898 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.12■□□□□ 0.33
ATG4B-220ENST00000482507 CGNQ9P2M7 1197 aaKnown RBP17.12■□□□□ 0.33
ATG4B-220ENST00000482507 LRP5O75197 1615 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 ANKRD36CQ5JPF3 1778 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 GSG1L2A8MUP6 293 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 IFIT3O14879 490 aaKnown RBP17.12■□□□□ 0.33
ATG4B-220ENST00000482507 UQCRFS1P1P0C7P4 283 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 GOLGA8FQ08AF8 430 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 GOLGA8DPQ0D2H9 430 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 KMT5BQ4FZB7 885 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 CPLX2Q6PUV4 134 aaKnown RBP17.12■□□□□ 0.33
ATG4B-220ENST00000482507 FEZ1Q99689 392 aa17.12■□□□□ 0.33
ATG4B-220ENST00000482507 BTBD18B2RXH4 712 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 TMEM232C9JQI7 657 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 LIFRP42702 1097 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 ZKSCAN3Q9BRR0 538 aa17.11■□□□□ 0.33
ATG4B-220ENST00000482507 KCNJ14Q9UNX9 436 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms