RNA–Protein interactions for RNA: ENST00000482401.6

CAPN8-209, Transcript of calpain 8, humanhuman

TSL 2

Gene CAPN8, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-209ENST00000482401 NOL10Q9BSC4 688 aaKnown RBP17.07■□□□□ 0.32
CAPN8-209ENST00000482401 RBM27Q9P2N5 1060 aaKnown RBP17.07■□□□□ 0.32
CAPN8-209ENST00000482401 DOCK1Q14185 1865 aa17.06■□□□□ 0.32
CAPN8-209ENST00000482401 ELNP15502 786 aa17.06■□□□□ 0.32
CAPN8-209ENST00000482401 RARSP54136 660 aaKnown RBP17.06■□□□□ 0.32
CAPN8-209ENST00000482401 HMG20BQ9P0W2 317 aa17.06■□□□□ 0.32
CAPN8-209ENST00000482401 COL2A1P02458 1487 aaPredicted RBP17.05■□□□□ 0.32
CAPN8-209ENST00000482401 USP17L5A8MUK1 530 aa17.05■□□□□ 0.32
CAPN8-209ENST00000482401 ZBTB7BO15156 539 aaPredicted RBP17.05■□□□□ 0.32
CAPN8-209ENST00000482401 EVI5O60447 810 aa17.05■□□□□ 0.32
CAPN8-209ENST00000482401 GNAI2P04899 355 aa17.05■□□□□ 0.32
CAPN8-209ENST00000482401 UQCRFS1P1P0C7P4 283 aa17.05■□□□□ 0.32
CAPN8-209ENST00000482401 SPP2Q13103 211 aa17.05■□□□□ 0.32
CAPN8-209ENST00000482401 G3BP1Q13283 466 aaKnown RBP eCLIP17.05■□□□□ 0.32
CAPN8-209ENST00000482401 NSUN4Q96CB9 384 aaKnown RBP17.05■□□□□ 0.32
CAPN8-209ENST00000482401 DEFB118Q96PH6 123 aa17.05■□□□□ 0.32
CAPN8-209ENST00000482401 AS3MTQ9HBK9 375 aa17.05■□□□□ 0.32
CAPN8-209ENST00000482401 RAI14Q9P0K7 980 aa17.05■□□□□ 0.32
CAPN8-209ENST00000482401 LRP2BPQ9P2M1 347 aa17.05■□□□□ 0.32
CAPN8-209ENST00000482401 HERC5Q9UII4 1024 aaKnown RBP17.05■□□□□ 0.32
CAPN8-209ENST00000482401 TAOK2Q9UL54 1235 aa17.05■□□□□ 0.32
CAPN8-209ENST00000482401 BAG3O95817 575 aa17.04■□□□□ 0.32
CAPN8-209ENST00000482401 ARID4AP29374 1257 aaPredicted RBP17.04■□□□□ 0.32
CAPN8-209ENST00000482401 CAP2P40123 477 aa17.04■□□□□ 0.32
CAPN8-209ENST00000482401 TREML2Q5T2D2 321 aa17.04■□□□□ 0.32
CAPN8-209ENST00000482401 TEX11Q8IYF3 940 aa17.04■□□□□ 0.32
CAPN8-209ENST00000482401 DHX36Q9H2U1 1008 aaKnown RBP17.04■□□□□ 0.32
CAPN8-209ENST00000482401 PAK6Q9NQU5 681 aaPredicted RBP17.04■□□□□ 0.32
CAPN8-209ENST00000482401 PI4KBQ9UBF8 816 aa17.04■□□□□ 0.32
CAPN8-209ENST00000482401 PHIPQ8WWQ0 1821 aa17.03■□□□□ 0.32
CAPN8-209ENST00000482401 A0A1W2PPC1 479 aa17.03■□□□□ 0.32
CAPN8-209ENST00000482401 PLCG2P16885 1265 aa17.03■□□□□ 0.32
CAPN8-209ENST00000482401 ZNF384Q8TF68 577 aa17.03■□□□□ 0.32
CAPN8-209ENST00000482401 CRISPLD2Q9H0B8 497 aa17.03■□□□□ 0.32
CAPN8-209ENST00000482401 PTPRFP10586 1907 aa17.03■□□□□ 0.32
CAPN8-209ENST00000482401 IGSF3O75054 1194 aa17.02■□□□□ 0.32
CAPN8-209ENST00000482401 SLURP2P0DP57 97 aa17.02■□□□□ 0.32
CAPN8-209ENST00000482401 HMGCS2P54868 508 aa17.02■□□□□ 0.32
CAPN8-209ENST00000482401 SH3D19Q5HYK7 790 aa17.02■□□□□ 0.32
CAPN8-209ENST00000482401 TBC1D9Q6ZT07 1266 aa17.02■□□□□ 0.32
CAPN8-209ENST00000482401 NECAB2Q7Z6G3 386 aa17.02■□□□□ 0.32
CAPN8-209ENST00000482401 CCDC84Q86UT8 332 aaPredicted RBP17.02■□□□□ 0.32
CAPN8-209ENST00000482401 ANKLE1Q8NAG6 615 aa17.02■□□□□ 0.32
CAPN8-209ENST00000482401 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.02■□□□□ 0.32
CAPN8-209ENST00000482401 HMGCRP04035 888 aa17.01■□□□□ 0.31
CAPN8-209ENST00000482401 WDR18Q9BV38 432 aa17.01■□□□□ 0.31
CAPN8-209ENST00000482401 TRIM34Q9BYJ4 488 aa17.01■□□□□ 0.31
CAPN8-209ENST00000482401 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.01■□□□□ 0.31
CAPN8-209ENST00000482401 ASCC2Q9H1I8 757 aaPredicted RBP17.01■□□□□ 0.31
CAPN8-209ENST00000482401 PRO3102Q9H379 93 aa17.01■□□□□ 0.31
CAPN8-209ENST00000482401 GINM1Q9NU53 330 aa17.01■□□□□ 0.31
CAPN8-209ENST00000482401 TMOD4Q9NZQ9 345 aa17.01■□□□□ 0.31
CAPN8-209ENST00000482401 FAM196BA6NMK8 535 aa17■□□□□ 0.31
CAPN8-209ENST00000482401 ASNSP08243 561 aa17■□□□□ 0.31
CAPN8-209ENST00000482401 IRX3P78415 501 aaPredicted RBP17■□□□□ 0.31
CAPN8-209ENST00000482401 CCDC158Q5M9N0 1113 aa17■□□□□ 0.31
CAPN8-209ENST00000482401 NAA16Q6N069 864 aaPredicted RBP17■□□□□ 0.31
CAPN8-209ENST00000482401 RPTORQ8N122 1335 aa16.99■□□□□ 0.31
CAPN8-209ENST00000482401 MCAMP43121 646 aa16.99■□□□□ 0.31
CAPN8-209ENST00000482401 PI16Q6UXB8 463 aa16.99■□□□□ 0.31
CAPN8-209ENST00000482401 ATF7IPQ6VMQ6 1270 aa16.99■□□□□ 0.31
CAPN8-209ENST00000482401 FOXP4Q8IVH2 680 aaPredicted RBP16.99■□□□□ 0.31
CAPN8-209ENST00000482401 SH3RF3Q8TEJ3 882 aaPredicted RBP16.99■□□□□ 0.31
CAPN8-209ENST00000482401 PAWRQ96IZ0 340 aaKnown RBP16.99■□□□□ 0.31
CAPN8-209ENST00000482401 HMX1Q9NP08 348 aaPredicted RBP16.99■□□□□ 0.31
CAPN8-209ENST00000482401 GPR108Q9NPR9 543 aa16.99■□□□□ 0.31
CAPN8-209ENST00000482401 MORF4L1Q9UBU8 362 aa16.99■□□□□ 0.31
CAPN8-209ENST00000482401 C19orf81C9J6K1 198 aa16.98■□□□□ 0.31
CAPN8-209ENST00000482401 HOXA7P31268 230 aaPredicted RBP16.98■□□□□ 0.31
CAPN8-209ENST00000482401 BACE1P56817 501 aa16.98■□□□□ 0.31
CAPN8-209ENST00000482401 PPP4CP60510 307 aa16.98■□□□□ 0.31
CAPN8-209ENST00000482401 TTC39AQ5SRH9 613 aa16.98■□□□□ 0.31
CAPN8-209ENST00000482401 TRMT44Q8IYL2 757 aaKnown RBP16.98■□□□□ 0.31
CAPN8-209ENST00000482401 CRACR2BQ8N4Y2 399 aaPredicted RBP16.98■□□□□ 0.31
CAPN8-209ENST00000482401 GJD2Q9UKL4 321 aa16.98■□□□□ 0.31
CAPN8-209ENST00000482401 LOC285556D6RIA3 1793 aa16.97■□□□□ 0.31
CAPN8-209ENST00000482401 TRIM27P14373 513 aa16.97■□□□□ 0.31
CAPN8-209ENST00000482401 METTL16Q86W50 562 aaKnown RBP16.97■□□□□ 0.31
CAPN8-209ENST00000482401 GPRC5AQ8NFJ5 357 aa16.97■□□□□ 0.31
CAPN8-209ENST00000482401 GTF3C2Q8WUA4 911 aaPredicted RBP16.97■□□□□ 0.31
CAPN8-209ENST00000482401 NBPF3Q9H094 633 aa16.97■□□□□ 0.31
CAPN8-209ENST00000482401 AATFQ9NY61 560 aaKnown RBP eCLIP16.97■□□□□ 0.31
CAPN8-209ENST00000482401 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.97■□□□□ 0.31
CAPN8-209ENST00000482401 DOCK3Q8IZD9 2030 aa16.96■□□□□ 0.31
CAPN8-209ENST00000482401 PNMA6EA0A0J9YXQ4 647 aa16.96■□□□□ 0.31
CAPN8-209ENST00000482401 USP17L10C9JJH3 530 aa16.96■□□□□ 0.31
CAPN8-209ENST00000482401 OS9Q13438 667 aaPredicted RBP16.96■□□□□ 0.31
CAPN8-209ENST00000482401 MTMR2Q13614 643 aa16.96■□□□□ 0.31
CAPN8-209ENST00000482401 PDE3AQ14432 1141 aa16.96■□□□□ 0.31
CAPN8-209ENST00000482401 RRP1BQ14684 758 aaKnown RBP16.96■□□□□ 0.31
CAPN8-209ENST00000482401 CCAR1Q8IX12 1150 aaKnown RBP16.96■□□□□ 0.31
CAPN8-209ENST00000482401 TGFBRAP1Q8WUH2 860 aa16.96■□□□□ 0.31
CAPN8-209ENST00000482401 SOCS4Q8WXH5 440 aa16.96■□□□□ 0.31
CAPN8-209ENST00000482401 FRAT1Q92837 279 aaPredicted RBP16.96■□□□□ 0.31
CAPN8-209ENST00000482401 NUDT12Q9BQG2 462 aa16.96■□□□□ 0.31
CAPN8-209ENST00000482401 HLA-DOAP06340 250 aa16.95■□□□□ 0.3
CAPN8-209ENST00000482401 XRCC5P13010 732 aaKnown RBP16.95■□□□□ 0.3
CAPN8-209ENST00000482401 MAPK4P31152 587 aa16.95■□□□□ 0.3
CAPN8-209ENST00000482401 CERS3Q8IU89 383 aa16.95■□□□□ 0.3
CAPN8-209ENST00000482401 ZNF512BQ96KM6 892 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms