RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 ACRBPQ8NEB7 543 aa17.68■□□□□ 0.42
CNKSR1-207ENST00000482227 MFAP3LO75121 409 aa17.68■□□□□ 0.42
CNKSR1-207ENST00000482227 PIP4K2BP78356 416 aa17.68■□□□□ 0.42
CNKSR1-207ENST00000482227 AMPD2Q01433 879 aa17.68■□□□□ 0.42
CNKSR1-207ENST00000482227 SLC39A6Q13433 755 aa17.68■□□□□ 0.42
CNKSR1-207ENST00000482227 LMBR1LQ6UX01 489 aa17.68■□□□□ 0.42
CNKSR1-207ENST00000482227 KRI1Q8N9T8 703 aaKnown RBP17.68■□□□□ 0.42
CNKSR1-207ENST00000482227 PHKBQ93100 1093 aa17.68■□□□□ 0.42
CNKSR1-207ENST00000482227 MYCBPQ99417 103 aaPredicted RBP17.68■□□□□ 0.42
CNKSR1-207ENST00000482227 NAPGQ99747 312 aaPredicted RBP17.68■□□□□ 0.42
CNKSR1-207ENST00000482227 VIPAS39Q9H9C1 493 aa17.68■□□□□ 0.42
CNKSR1-207ENST00000482227 TUBBP07437 444 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 CHRM1P11229 460 aaPredicted RBP17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 ARHGAP25P42331 645 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 DNAJC21Q5F1R6 531 aaKnown RBP17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 AFAP1L1Q8TED9 768 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 SERTAD1Q9UHV2 236 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 DENND2AQ9ULE3 1009 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 ARHGAP23Q9P227 1491 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 IFIT1P09914 478 aaKnown RBP17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 RXRAP19793 462 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 E2F4Q16254 413 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 NCAPH2Q6IBW4 605 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 PPFIBP1Q86W92 1011 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 NCOA7Q8NI08 942 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 DEF6Q9H4E7 631 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 DACH1Q9UI36 760 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 ZMYM6O95789 1325 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 CPDO75976 1380 aa17.67■□□□□ 0.42
CNKSR1-207ENST00000482227 A0A087WZG4 1122 aa17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 ATP5J2-PTCD1G3V325 749 aa17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 UBE2Q2LH0YL09 131 aa17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 POLR2DO15514 142 aaKnown RBP17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 PTCD1O75127 700 aaKnown RBP17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 FECHP22830 423 aa17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 CASP14P31944 242 aa17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 PLCD1P51178 756 aa17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 MMS22LQ6ZRQ5 1243 aa17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 TEX2Q8IWB9 1127 aa17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 ACBD3Q9H3P7 528 aa17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 ADD3Q9UEY8 706 aaKnown RBP17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 MAP3K15Q6ZN16 1313 aa17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 NWD2Q9ULI1 1742 aa17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 LTN1O94822 1766 aa17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 A0A087WUV0 522 aaPredicted RBP17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 PIP4K2AP48426 406 aaPredicted RBP17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 FXR1P51114 621 aaKnown RBP eCLIP17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 HOOK1Q9UJC3 728 aaKnown RBP17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 TTF2Q9UNY4 1162 aaKnown RBP17.66■□□□□ 0.42
CNKSR1-207ENST00000482227 GYPCP04921 128 aa17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 ERCC5P28715 1186 aaPredicted RBP17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 SWT1Q5T5J6 900 aaKnown RBP17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 SPATA20Q8TB22 786 aa17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 RIN2Q8WYP3 895 aaPredicted RBP17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 GPR108Q9NPR9 543 aa17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 HPCAL4Q9UM19 191 aa17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 ERVK-24P63145 666 aa17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 ZNF790Q6PG37 636 aa17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 RALYLQ86SE5 291 aaKnown RBP17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 TRIML1Q8N9V2 468 aa17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 KAT2BQ92831 832 aa17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 MYO6Q9UM54 1294 aa17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 NFAT5O94916 1531 aa17.65■□□□□ 0.42
CNKSR1-207ENST00000482227 EXOC5O00471 708 aa17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 KCNA6P17658 529 aa17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 METAP2P50579 478 aaKnown RBP eCLIP17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 TOB1P50616 345 aaPredicted RBP17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 FOXO4P98177 505 aa17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 SKIDA1Q1XH10 827 aa17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 SENP2Q9HC62 589 aa17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 FBXO2Q9UK22 296 aaPredicted RBP17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 CDHR2Q9BYE9 1310 aa17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 WDR19Q8NEZ3 1342 aa17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 NTRK3Q16288 839 aa17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 MCTP2Q6DN12 878 aa17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 THEMISQ8N1K5 641 aaPredicted RBP17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 MICALL1Q8N3F8 863 aa17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 NBPF3Q9H094 633 aa17.64■□□□□ 0.41
CNKSR1-207ENST00000482227 C4AP0C0L4 1744 aa17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 C4BP0C0L5 1744 aa17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 ACTN4O43707 911 aaKnown RBP17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 RANBP6O60518 1105 aaKnown RBP17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 SHOX2O60902 331 aaPredicted RBP17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 CD44P16070 742 aaKnown RBP17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 PTPREP23469 700 aa17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 EIF5P55010 431 aaKnown RBP17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 HSP90AB3PQ58FF7 597 aa17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 CTCFLQ8NI51 663 aaPredicted RBP17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 RNF225M0QZC1 329 aaPredicted RBP17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 USP14P54578 494 aa17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 WASHC4Q2M389 1173 aa17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 CDKAL1Q5VV42 579 aa17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 PUS7LQ9H0K6 701 aaKnown RBP17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 ANGEL1Q9UNK9 670 aaKnown RBP17.63■□□□□ 0.41
CNKSR1-207ENST00000482227 FKBP4Q02790 459 aaKnown RBP eCLIP17.62■□□□□ 0.41
CNKSR1-207ENST00000482227 LRRC24Q50LG9 513 aa17.62■□□□□ 0.41
CNKSR1-207ENST00000482227 SPATA1Q5VX52 437 aa17.62■□□□□ 0.41
CNKSR1-207ENST00000482227 CYB5R4Q7L1T6 521 aa17.62■□□□□ 0.41
CNKSR1-207ENST00000482227 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms