RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 OSBPL5Q9H0X9 879 aaPredicted RBP20.6■□□□□ 0.89
NUP58-212ENST00000481980 TNNQ9UQP3 1299 aa20.6■□□□□ 0.89
NUP58-212ENST00000481980 SZT2Q5T011 3432 aa20.6■□□□□ 0.89
NUP58-212ENST00000481980 COL2A1P02458 1487 aaPredicted RBP20.59■□□□□ 0.89
NUP58-212ENST00000481980 TNPO2O14787 897 aaKnown RBP20.59■□□□□ 0.89
NUP58-212ENST00000481980 BCAR3O75815 825 aa20.59■□□□□ 0.89
NUP58-212ENST00000481980 NEFLP07196 543 aa20.59■□□□□ 0.89
NUP58-212ENST00000481980 UQCRFS1P1P0C7P4 283 aa20.59■□□□□ 0.89
NUP58-212ENST00000481980 MCAMP43121 646 aa20.59■□□□□ 0.89
NUP58-212ENST00000481980 TREML2Q5T2D2 321 aa20.59■□□□□ 0.89
NUP58-212ENST00000481980 PXYLP1Q8TE99 480 aa20.59■□□□□ 0.89
NUP58-212ENST00000481980 UNC93B1Q9H1C4 597 aa20.59■□□□□ 0.89
NUP58-212ENST00000481980 PHIPQ8WWQ0 1821 aa20.59■□□□□ 0.89
NUP58-212ENST00000481980 MGAMO43451 1857 aa20.58■□□□□ 0.89
NUP58-212ENST00000481980 SPP2Q13103 211 aa20.58■□□□□ 0.89
NUP58-212ENST00000481980 IRF5Q13568 498 aa20.58■□□□□ 0.89
NUP58-212ENST00000481980 TEX11Q8IYF3 940 aa20.58■□□□□ 0.89
NUP58-212ENST00000481980 PROCA1Q8NCQ7 364 aaPredicted RBP20.58■□□□□ 0.89
NUP58-212ENST00000481980 ZNF280CQ8ND82 737 aa20.58■□□□□ 0.89
NUP58-212ENST00000481980 U2AF1L4Q8WU68 220 aaKnown RBP20.58■□□□□ 0.89
NUP58-212ENST00000481980 CLUAP1Q96AJ1 413 aa20.58■□□□□ 0.89
NUP58-212ENST00000481980 LRP2BPQ9P2M1 347 aa20.58■□□□□ 0.89
NUP58-212ENST00000481980 PNMA3Q9UL41 463 aa20.58■□□□□ 0.89
NUP58-212ENST00000481980 PTPRFP10586 1907 aa20.58■□□□□ 0.88
NUP58-212ENST00000481980 ELNP15502 786 aa20.57■□□□□ 0.88
NUP58-212ENST00000481980 CAP2P40123 477 aa20.57■□□□□ 0.88
NUP58-212ENST00000481980 ANKRD13CQ8N6S4 541 aa20.57■□□□□ 0.88
NUP58-212ENST00000481980 HTATIP2Q9BUP3 242 aa20.57■□□□□ 0.88
NUP58-212ENST00000481980 TBC1D2Q9BYX2 928 aa20.57■□□□□ 0.88
NUP58-212ENST00000481980 SGPL1O95470 568 aa20.56■□□□□ 0.88
NUP58-212ENST00000481980 INHAP05111 366 aa20.56■□□□□ 0.88
NUP58-212ENST00000481980 RRP1BQ14684 758 aaKnown RBP20.56■□□□□ 0.88
NUP58-212ENST00000481980 SH3RF3Q8TEJ3 882 aaPredicted RBP20.56■□□□□ 0.88
NUP58-212ENST00000481980 COA7Q96BR5 231 aa20.56■□□□□ 0.88
NUP58-212ENST00000481980 GPR108Q9NPR9 543 aa20.56■□□□□ 0.88
NUP58-212ENST00000481980 HERC5Q9UII4 1024 aaKnown RBP20.56■□□□□ 0.88
NUP58-212ENST00000481980 USP17L5A8MUK1 530 aa20.55■□□□□ 0.88
NUP58-212ENST00000481980 MS4A1P11836 297 aa20.55■□□□□ 0.88
NUP58-212ENST00000481980 FAM110CQ1W6H9 321 aa20.55■□□□□ 0.88
NUP58-212ENST00000481980 NOL10Q9BSC4 688 aaKnown RBP20.55■□□□□ 0.88
NUP58-212ENST00000481980 SNRKQ9NRH2 765 aa20.55■□□□□ 0.88
NUP58-212ENST00000481980 PI4KBQ9UBF8 816 aa20.55■□□□□ 0.88
NUP58-212ENST00000481980 FARP2O94887 1054 aaPredicted RBP20.54■□□□□ 0.88
NUP58-212ENST00000481980 BAG3O95817 575 aa20.54■□□□□ 0.88
NUP58-212ENST00000481980 CAPN2P17655 700 aa20.54■□□□□ 0.88
NUP58-212ENST00000481980 GCLCP48506 637 aaPredicted RBP20.54■□□□□ 0.88
NUP58-212ENST00000481980 HMGCS2P54868 508 aa20.54■□□□□ 0.88
NUP58-212ENST00000481980 PABPC4Q13310 644 aaKnown RBP eCLIP20.54■□□□□ 0.88
NUP58-212ENST00000481980 POLA2Q14181 598 aa20.54■□□□□ 0.88
NUP58-212ENST00000481980 NAA16Q6N069 864 aaPredicted RBP20.54■□□□□ 0.88
NUP58-212ENST00000481980 CHRDL2Q6WN34 429 aa20.54■□□□□ 0.88
NUP58-212ENST00000481980 TMEM57Q8N5G2 664 aa20.54■□□□□ 0.88
NUP58-212ENST00000481980 DHX36Q9H2U1 1008 aaKnown RBP20.54■□□□□ 0.88
NUP58-212ENST00000481980 SUPT16HQ9Y5B9 1047 aaKnown RBP20.54■□□□□ 0.88
NUP58-212ENST00000481980 PPP4CP60510 307 aa20.53■□□□□ 0.88
NUP58-212ENST00000481980 TNNI3KQ59H18 835 aa20.53■□□□□ 0.88
NUP58-212ENST00000481980 SH3D19Q5HYK7 790 aa20.53■□□□□ 0.88
NUP58-212ENST00000481980 CCDC158Q5M9N0 1113 aa20.53■□□□□ 0.88
NUP58-212ENST00000481980 TTC39AQ5SRH9 613 aa20.53■□□□□ 0.88
NUP58-212ENST00000481980 FPGT-TNNI3KV9GXZ4 949 aa20.53■□□□□ 0.88
NUP58-212ENST00000481980 TFRCP02786 760 aaKnown RBP20.52■□□□□ 0.88
NUP58-212ENST00000481980 PLCG2P16885 1265 aa20.52■□□□□ 0.88
NUP58-212ENST00000481980 RRP1P56182 461 aaKnown RBP20.52■□□□□ 0.88
NUP58-212ENST00000481980 ZKSCAN2Q63HK3 967 aa20.52■□□□□ 0.88
NUP58-212ENST00000481980 FTSJ3Q8IY81 847 aaKnown RBP20.52■□□□□ 0.88
NUP58-212ENST00000481980 SSH3Q8TE77 659 aa20.52■□□□□ 0.88
NUP58-212ENST00000481980 DEFB118Q96PH6 123 aa20.52■□□□□ 0.88
NUP58-212ENST00000481980 DBNDD2Q9BQY9 259 aa20.52■□□□□ 0.88
NUP58-212ENST00000481980 WDR18Q9BV38 432 aa20.52■□□□□ 0.88
NUP58-212ENST00000481980 ASCC2Q9H1I8 757 aaPredicted RBP20.52■□□□□ 0.88
NUP58-212ENST00000481980 AS3MTQ9HBK9 375 aa20.52■□□□□ 0.88
NUP58-212ENST00000481980 PAK6Q9NQU5 681 aaPredicted RBP20.52■□□□□ 0.88
NUP58-212ENST00000481980 AATFQ9NY61 560 aaKnown RBP eCLIP20.52■□□□□ 0.88
NUP58-212ENST00000481980 TAOK2Q9UL54 1235 aa20.52■□□□□ 0.88
NUP58-212ENST00000481980 NR2E3Q9Y5X4 410 aa20.52■□□□□ 0.88
NUP58-212ENST00000481980 CYP2E1P05181 493 aaPredicted RBP20.51■□□□□ 0.87
NUP58-212ENST00000481980 ATP8B2P98198 1209 aa20.51■□□□□ 0.87
NUP58-212ENST00000481980 OS9Q13438 667 aaPredicted RBP20.51■□□□□ 0.87
NUP58-212ENST00000481980 TGFBRAP1Q8WUH2 860 aa20.51■□□□□ 0.87
NUP58-212ENST00000481980 RBM27Q9P2N5 1060 aaKnown RBP20.51■□□□□ 0.87
NUP58-212ENST00000481980 LOC285556D6RIA3 1793 aa20.5■□□□□ 0.87
NUP58-212ENST00000481980 ADGRA1Q86SQ6 560 aa20.5■□□□□ 0.87
NUP58-212ENST00000481980 METTL16Q86W50 562 aaKnown RBP20.5■□□□□ 0.87
NUP58-212ENST00000481980 FOXP4Q8IVH2 680 aaPredicted RBP20.5■□□□□ 0.87
NUP58-212ENST00000481980 MAPKAPK5Q8IW41 473 aa20.5■□□□□ 0.87
NUP58-212ENST00000481980 ZNF512BQ96KM6 892 aaPredicted RBP20.5■□□□□ 0.87
NUP58-212ENST00000481980 IGSF3O75054 1194 aa20.49■□□□□ 0.87
NUP58-212ENST00000481980 SURF6O75683 361 aaKnown RBP20.49■□□□□ 0.87
NUP58-212ENST00000481980 ASNSP08243 561 aa20.49■□□□□ 0.87
NUP58-212ENST00000481980 BACE1P56817 501 aa20.49■□□□□ 0.87
NUP58-212ENST00000481980 JAG1P78504 1218 aa20.49■□□□□ 0.87
NUP58-212ENST00000481980 CRISPLD2Q9H0B8 497 aa20.49■□□□□ 0.87
NUP58-212ENST00000481980 GJD2Q9UKL4 321 aa20.49■□□□□ 0.87
NUP58-212ENST00000481980 FLT1P17948 1338 aa20.49■□□□□ 0.87
NUP58-212ENST00000481980 DOCK3Q8IZD9 2030 aa20.48■□□□□ 0.87
NUP58-212ENST00000481980 ZBTB7BO15156 539 aaPredicted RBP20.48■□□□□ 0.87
NUP58-212ENST00000481980 MTMR2Q13614 643 aa20.48■□□□□ 0.87
NUP58-212ENST00000481980 PRO3102Q9H379 93 aa20.48■□□□□ 0.87
NUP58-212ENST00000481980 DNAJC18Q9H819 358 aa20.48■□□□□ 0.87
NUP58-212ENST00000481980 MORF4L1Q9UBU8 362 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms