RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 MYH1P12882 1939 aa13.79□□□□□ -0.2
HPS4-212ENST00000481910 CNTNAP1P78357 1384 aa13.79□□□□□ -0.2
HPS4-212ENST00000481910 ALX1Q15699 326 aa13.78□□□□□ -0.2
HPS4-212ENST00000481910 CTR9Q6PD62 1173 aa13.78□□□□□ -0.2
HPS4-212ENST00000481910 KRT26Q7Z3Y9 468 aa13.78□□□□□ -0.2
HPS4-212ENST00000481910 LDHDQ86WU2 507 aa13.78□□□□□ -0.2
HPS4-212ENST00000481910 DHX36Q9H2U1 1008 aaKnown RBP13.78□□□□□ -0.2
HPS4-212ENST00000481910 CTNNA3Q9UI47 895 aa13.78□□□□□ -0.2
HPS4-212ENST00000481910 MINDY4BA8MYZ0 360 aa13.78□□□□□ -0.2
HPS4-212ENST00000481910 MAP1SQ66K74 1059 aaPredicted RBP13.78□□□□□ -0.2
HPS4-212ENST00000481910 SECISBP2LQ93073 1101 aaKnown RBP13.78□□□□□ -0.2
HPS4-212ENST00000481910 BACH2Q9BYV9 841 aa13.78□□□□□ -0.2
HPS4-212ENST00000481910 ARPP21Q9UBL0 812 aaPredicted RBP13.78□□□□□ -0.2
HPS4-212ENST00000481910 U3KPZ7 1027 aaPredicted RBP13.78□□□□□ -0.2
HPS4-212ENST00000481910 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.2
HPS4-212ENST00000481910 DDTLA6NHG4 134 aaPredicted RBP13.77□□□□□ -0.21
HPS4-212ENST00000481910 CDC37L1Q7L3B6 337 aa13.77□□□□□ -0.21
HPS4-212ENST00000481910 TTC6Q86TZ1 520 aa13.77□□□□□ -0.21
HPS4-212ENST00000481910 USP48Q86UV5 1035 aa13.77□□□□□ -0.21
HPS4-212ENST00000481910 USP26Q9BXU7 913 aa13.77□□□□□ -0.21
HPS4-212ENST00000481910 RBM8AQ9Y5S9 174 aaKnown RBP13.77□□□□□ -0.21
HPS4-212ENST00000481910 ZMYM6O95789 1325 aa13.77□□□□□ -0.21
HPS4-212ENST00000481910 CYP2D7A0A087X1C5 515 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 PLCD1P51178 756 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 SBK1Q52WX2 424 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 C12orf60Q5U649 245 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 PRAMEF18Q5VWM3 479 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 SH3BP5LQ7L8J4 393 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 ZNF784Q8NCA9 323 aaPredicted RBP13.76□□□□□ -0.21
HPS4-212ENST00000481910 CSRNP1Q96S65 589 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 PI4KBQ9UBF8 816 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 PPP2R3BQ9Y5P8 575 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 ADM5C9JUS6 153 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 ZNF213O14771 459 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 EPB41L2O43491 1005 aaKnown RBP13.76□□□□□ -0.21
HPS4-212ENST00000481910 HLA-DOAP06340 250 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 CYP2D6P10635 497 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 HAND2P61296 217 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 PPARAQ07869 468 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 IMMTQ16891 758 aaKnown RBP13.76□□□□□ -0.21
HPS4-212ENST00000481910 TEPSINQ96N21 525 aa13.76□□□□□ -0.21
HPS4-212ENST00000481910 GLIS2Q9BZE0 524 aaPredicted RBP13.76□□□□□ -0.21
HPS4-212ENST00000481910 ATRNL1Q5VV63 1379 aa13.75□□□□□ -0.21
HPS4-212ENST00000481910 KIF3CO14782 793 aa13.75□□□□□ -0.21
HPS4-212ENST00000481910 EVX2Q03828 476 aa13.75□□□□□ -0.21
HPS4-212ENST00000481910 NECTIN1Q15223 517 aa13.75□□□□□ -0.21
HPS4-212ENST00000481910 DLK2Q6UY11 383 aa13.75□□□□□ -0.21
HPS4-212ENST00000481910 CDAN1Q8IWY9 1227 aa13.75□□□□□ -0.21
HPS4-212ENST00000481910 STK11IPQ8N1F8 1099 aa13.75□□□□□ -0.21
HPS4-212ENST00000481910 FAM43AQ8N2R8 423 aa13.75□□□□□ -0.21
HPS4-212ENST00000481910 SMIM22K7EJ46 135 aa13.74□□□□□ -0.21
HPS4-212ENST00000481910 CTDSPL2Q05D32 466 aa13.74□□□□□ -0.21
HPS4-212ENST00000481910 NBPF12Q5TAG4 269 aaPredicted RBP13.74□□□□□ -0.21
HPS4-212ENST00000481910 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
HPS4-212ENST00000481910 CHADLQ6NUI6 762 aa13.74□□□□□ -0.21
HPS4-212ENST00000481910 FOXP4Q8IVH2 680 aaPredicted RBP13.74□□□□□ -0.21
HPS4-212ENST00000481910 UPF2Q9HAU5 1272 aaKnown RBP13.74□□□□□ -0.21
HPS4-212ENST00000481910 PRDM4Q9UKN5 801 aa13.74□□□□□ -0.21
HPS4-212ENST00000481910 COL2A1P02458 1487 aaPredicted RBP13.74□□□□□ -0.21
HPS4-212ENST00000481910 SLC3A2P08195 630 aaKnown RBP13.74□□□□□ -0.21
HPS4-212ENST00000481910 CYP21A2P08686 494 aa13.74□□□□□ -0.21
HPS4-212ENST00000481910 SUPT20HL1Q3ZLR7 823 aa13.74□□□□□ -0.21
HPS4-212ENST00000481910 DDX60LQ5H9U9 1706 aaKnown RBP13.74□□□□□ -0.21
HPS4-212ENST00000481910 CRACR2BQ8N4Y2 399 aaPredicted RBP13.74□□□□□ -0.21
HPS4-212ENST00000481910 TRIM34Q9BYJ4 488 aa13.74□□□□□ -0.21
HPS4-212ENST00000481910 SERPINB13Q9UIV8 391 aa13.74□□□□□ -0.21
HPS4-212ENST00000481910 SLC27A2O14975 620 aa13.73□□□□□ -0.21
HPS4-212ENST00000481910 MCCP23508 829 aa13.73□□□□□ -0.21
HPS4-212ENST00000481910 HSPA4P34932 840 aa13.73□□□□□ -0.21
HPS4-212ENST00000481910 CREB3L3Q68CJ9 461 aa13.73□□□□□ -0.21
HPS4-212ENST00000481910 MIGA2Q7L4E1 593 aa13.73□□□□□ -0.21
HPS4-212ENST00000481910 HOOK2Q96ED9 719 aa13.73□□□□□ -0.21
HPS4-212ENST00000481910 DYNLL2Q96FJ2 89 aa13.73□□□□□ -0.21
HPS4-212ENST00000481910 ANAPC4Q9UJX5 808 aa13.73□□□□□ -0.21
HPS4-212ENST00000481910 ZKSCAN1P17029 563 aaPredicted RBP13.72□□□□□ -0.21
HPS4-212ENST00000481910 CDCA5Q96FF9 252 aa13.72□□□□□ -0.21
HPS4-212ENST00000481910 EHD4Q9H223 541 aa13.72□□□□□ -0.21
HPS4-212ENST00000481910 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.72□□□□□ -0.21
HPS4-212ENST00000481910 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
HPS4-212ENST00000481910 FAM196BA6NMK8 535 aa13.72□□□□□ -0.21
HPS4-212ENST00000481910 TRAF5O00463 557 aa13.72□□□□□ -0.21
HPS4-212ENST00000481910 SLURP2P0DP57 97 aa13.72□□□□□ -0.21
HPS4-212ENST00000481910 NF2P35240 595 aa13.72□□□□□ -0.21
HPS4-212ENST00000481910 MFSD6Q6ZSS7 791 aa13.72□□□□□ -0.21
HPS4-212ENST00000481910 HERC5Q9UII4 1024 aaKnown RBP13.72□□□□□ -0.21
HPS4-212ENST00000481910 LAMB1P07942 1786 aa13.72□□□□□ -0.21
HPS4-212ENST00000481910 TOMM70O94826 608 aa13.71□□□□□ -0.21
HPS4-212ENST00000481910 PTMAP06454 111 aaKnown RBP13.71□□□□□ -0.21
HPS4-212ENST00000481910 GABPAQ06546 454 aa13.71□□□□□ -0.21
HPS4-212ENST00000481910 PDE4BQ07343 736 aa13.71□□□□□ -0.21
HPS4-212ENST00000481910 AKNAD1Q5T1N1 836 aa13.71□□□□□ -0.21
HPS4-212ENST00000481910 NBPF3Q9H094 633 aa13.71□□□□□ -0.21
HPS4-212ENST00000481910 INCENPQ9NQS7 918 aa13.71□□□□□ -0.21
HPS4-212ENST00000481910 TOMM22Q9NS69 142 aa13.71□□□□□ -0.21
HPS4-212ENST00000481910 TBC1D12O60347 775 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 PRDM1O75626 825 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 ITGBL1O95965 494 aaPredicted RBP13.7□□□□□ -0.22
HPS4-212ENST00000481910 CDK8P49336 464 aa13.7□□□□□ -0.22
HPS4-212ENST00000481910 FMR1Q06787 632 aaKnown RBP eCLIP13.7□□□□□ -0.22
HPS4-212ENST00000481910 PRKG1Q13976 671 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms