RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 LPAR1Q92633 364 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 TTC14Q96N46 770 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 GPBP1L1Q9HC44 474 aaPredicted RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 CNOT7Q9UIV1 285 aaKnown RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 CHMP3Q9Y3E7 222 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 CCDC171Q6TFL3 1326 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 MGAMO43451 1857 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 IRF6O14896 467 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 CDC45O75419 566 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 REC8O95072 547 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 YY1P25490 414 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 MCAMP43121 646 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 GHRHRQ02643 423 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 RASSF7Q02833 373 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 OTUD7BQ6GQQ9 843 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 PLEKHM2Q8IWE5 1019 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 SULF1Q8IWU6 871 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 MICALL2Q8IY33 904 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 ANKRD13AQ8IZ07 590 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 TMTC2Q8N394 836 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 MB21D1Q8N884 522 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 SPOCK2Q92563 424 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 LZTS2Q9BRK4 669 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 RIOK1Q9BRS2 568 aaKnown RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 GLT8D2Q9H1C3 349 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 ZNF277Q9NRM2 450 aaPredicted RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 PI4KBQ9UBF8 816 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 ZNF70Q9UC06 446 aaPredicted RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 PNMA3Q9UL41 463 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 DAGLAQ9Y4D2 1042 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 PCDHB15Q9Y5E8 787 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 MAGEB6P1A0A0J9YX57 407 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 SPDYE5A6NIY4 337 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 TMEM88BA6NKF7 163 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 POTECB2RU33 542 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 PATL2C9JE40 543 aaKnown RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 PPP1R12BO60237 982 aaPredicted RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 SLC10A3P09131 477 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 PDE6AP16499 860 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 PHKA1P46020 1223 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 RGS19P49795 217 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 RHBDL3P58872 404 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 GABPAQ06546 454 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 NOGQ13253 232 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 PKN2Q16513 984 aaKnown RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 CFAP100Q494V2 611 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 MCMDC2Q4G0Z9 681 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 RNF20Q5VTR2 975 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 APOBEC3HQ6NTF7 200 aaKnown RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 C16orf86Q6ZW13 317 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 FASTKD5Q7L8L6 764 aaKnown RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 USP48Q86UV5 1035 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 MSL3Q8N5Y2 521 aaKnown RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 C2orf69Q8N8R5 385 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 SHCBP1Q8NEM2 672 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 STAG1Q8WVM7 1258 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 MKL1Q969V6 931 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 KRTAP17-1Q9BYP8 105 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 PUS3Q9BZE2 481 aaKnown RBP3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 KRT23Q9C075 422 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 DEFB129Q9H1M3 183 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 NYAP2Q9P242 653 aa3.25□□□□□ -1.89
RAB3IP-206ENST00000481897 MYH4Q9Y623 1939 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 ATP2A1O14983 1001 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 ITGBL1O95965 494 aaPredicted RBP3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 CYP2E1P05181 493 aaPredicted RBP3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 ASNSP08243 561 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 CALM1P0DP23 149 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 CALM2P0DP24 149 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 CALM3P0DP25 149 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 HSPA6P17066 643 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 MCCP23508 829 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 TM4SF4P48230 202 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 TMEM179Q6ZVK1 233 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 GMCL1P1Q8NEA9 526 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 DBNDD2Q9BQY9 259 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 TTF2Q9UNY4 1162 aaKnown RBP3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 MORC2Q9Y6X9 1032 aaPredicted RBP3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 IGKV6D-41A0A0C4DH26 115 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 WNT10BO00744 389 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 SLC26A4O43511 780 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 GCLCP48506 637 aaPredicted RBP3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 MCM2P49736 904 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 GTF2A2P52657 109 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 GTF2IP78347 998 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 MAP2K1Q02750 393 aaPredicted RBP3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 MECOMQ03112 1051 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 PDE4BQ07343 736 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 ORC2Q13416 577 aaPredicted RBP3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 PPP1R18Q6NYC8 613 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 ERO1BQ86YB8 467 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 SCYL3Q8IZE3 742 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 ABRAQ8N0Z2 381 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 KLHL34Q8N239 644 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 CERS5Q8N5B7 392 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 PRDM10Q9NQV6 1147 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 RABGAP1Q9Y3P9 1069 aa3.24□□□□□ -1.89
RAB3IP-206ENST00000481897 SALL2Q9Y467 1007 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms