RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ST7Q9NRC1 585 aa4.36□□□□□ -1.71
SMC6-208ENST00000481708 HOMER2Q9NSB8 354 aa4.36□□□□□ -1.71
SMC6-208ENST00000481708 CFAP69A5D8W1 941 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 GNRH1P01148 92 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 MTFR1Q15390 333 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 CNPY4Q8N129 248 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 UBR7Q8N806 425 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 APPBP2Q92624 585 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 RTFDC1Q9BY42 306 aaPredicted RBP4.35□□□□□ -1.71
SMC6-208ENST00000481708 ASPSCR1Q9BZE9 553 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 UBP1Q9NZI7 540 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 SFMBT1Q9UHJ3 866 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 WASHC2CQ9Y4E1 1318 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 ALDH1A1P00352 501 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 MMRN1Q13201 1228 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 NNTQ13423 1086 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 TAF1CQ15572 869 aaPredicted RBP4.35□□□□□ -1.71
SMC6-208ENST00000481708 DDX42Q86XP3 938 aaKnown RBP eCLIP4.35□□□□□ -1.71
SMC6-208ENST00000481708 ITPKCQ96DU7 683 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 FRMD6Q96NE9 622 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 PPT2Q9UMR5 302 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 USP17L7P0C7H9 530 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 SRGNP10124 158 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 RAB27AP51159 221 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 ATP2B2Q01814 1243 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 NFX1Q12986 1120 aaKnown RBP4.35□□□□□ -1.71
SMC6-208ENST00000481708 ZNF772Q68DY9 489 aaPredicted RBP4.35□□□□□ -1.71
SMC6-208ENST00000481708 NXPE4Q6UWF7 544 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 RNF180Q86T96 592 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 C3orf58Q8NDZ4 430 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 FBF1Q8TES7 1133 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 SEC16BQ96JE7 1060 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 TRIM8Q9BZR9 551 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 TLR6Q9Y2C9 796 aa4.35□□□□□ -1.71
SMC6-208ENST00000481708 KIAA0232Q92628 1395 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 ANKRD30BQ9BXX2 1392 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 A6NJY4 79 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 BPNT1O95861 308 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 EIF4BP23588 611 aaKnown RBP4.34□□□□□ -1.71
SMC6-208ENST00000481708 SMTNP53814 917 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 AAMPQ13685 434 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 CYP2U1Q7Z449 544 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 SLC9A9Q8IVB4 645 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 FEZ1Q99689 392 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 MTA3Q9BTC8 594 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 BACH1O14867 736 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 USP5P45974 858 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 HNRNPMP52272 730 aaKnown RBP eCLIP4.34□□□□□ -1.71
SMC6-208ENST00000481708 ZNF697Q5TEC3 545 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 IFFO2Q5TF58 517 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 STRA8Q7Z7C7 330 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.34□□□□□ -1.71
SMC6-208ENST00000481708 TRPM4Q8TD43 1214 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 ZDHHC1Q8WTX9 485 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 SPON2Q9BUD6 331 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 KLK14Q9P0G3 267 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 SNED1Q8TER0 1413 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 NSD3Q9BZ95 1437 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 NUP155O75694 1391 aa4.34□□□□□ -1.71
SMC6-208ENST00000481708 J3QL48 77 aa4.34□□□□□ -1.72
SMC6-208ENST00000481708 SMAD7O15105 426 aaKnown RBP4.34□□□□□ -1.72
SMC6-208ENST00000481708 WDHD1O75717 1129 aaPredicted RBP4.34□□□□□ -1.72
SMC6-208ENST00000481708 SSBP05455 408 aaKnown RBP eCLIP4.34□□□□□ -1.72
SMC6-208ENST00000481708 CHMP4BP1P59074 171 aa4.34□□□□□ -1.72
SMC6-208ENST00000481708 SIM2Q14190 667 aaPredicted RBP4.34□□□□□ -1.72
SMC6-208ENST00000481708 MRM1Q6IN84 353 aaKnown RBP4.34□□□□□ -1.72
SMC6-208ENST00000481708 GLIS3Q8NEA6 775 aa4.34□□□□□ -1.72
SMC6-208ENST00000481708 CNKSR1Q969H4 720 aa4.34□□□□□ -1.72
SMC6-208ENST00000481708 RHOVQ96L33 236 aa4.34□□□□□ -1.72
SMC6-208ENST00000481708 ZFAND3Q9H8U3 227 aa4.34□□□□□ -1.72
SMC6-208ENST00000481708 IFRD1O00458 451 aaPredicted RBP4.33□□□□□ -1.72
SMC6-208ENST00000481708 KATNA1O75449 491 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 KRT26Q7Z3Y9 468 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 ANAPC16Q96DE5 110 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 XAGE2Q96GT9 111 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 PLCD4Q9BRC7 762 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.33□□□□□ -1.72
SMC6-208ENST00000481708 ESF1Q9H501 851 aaKnown RBP4.33□□□□□ -1.72
SMC6-208ENST00000481708 LRRC4BQ9NT99 713 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 TNS2Q63HR2 1409 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 ST13P50502 369 aaKnown RBP4.33□□□□□ -1.72
SMC6-208ENST00000481708 FOXC1Q12948 553 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 IDI1Q13907 227 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 DDR2Q16832 855 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 ERAP2Q6P179 960 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 KRBA2Q6ZNG9 492 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 Q6ZVU0 165 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 NUDT16Q96DE0 195 aaKnown RBP4.33□□□□□ -1.72
SMC6-208ENST00000481708 AGBL1Q96MI9 1066 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 B2RBV5 119 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 ADH1AP07327 375 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 ZNF598Q86UK7 904 aaKnown RBP4.33□□□□□ -1.72
SMC6-208ENST00000481708 FHDC1Q9C0D6 1143 aaPredicted RBP4.33□□□□□ -1.72
SMC6-208ENST00000481708 KCNQ5Q9NR82 932 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 PTCH2Q9Y6C5 1203 aa4.33□□□□□ -1.72
SMC6-208ENST00000481708 OVOS2A0A0J9YW53 1432 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 OVOS2Q6IE36 1432 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 PPP1R12BO60237 982 aaPredicted RBP4.32□□□□□ -1.72
SMC6-208ENST00000481708 NEFLP07196 543 aa4.32□□□□□ -1.72
SMC6-208ENST00000481708 ZAP70P43403 619 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms