RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 NRKQ7Z2Y5 1582 aa10.21□□□□□ -0.78
CBX3-206ENST00000481057 SOX1O00570 391 aaPredicted RBP10.2□□□□□ -0.78
CBX3-206ENST00000481057 TM4SF5O14894 197 aa10.2□□□□□ -0.78
CBX3-206ENST00000481057 SORBS3O60504 671 aa10.2□□□□□ -0.78
CBX3-206ENST00000481057 SPATA31C1P0DKV0 1188 aa10.2□□□□□ -0.78
CBX3-206ENST00000481057 ZNF423Q2M1K9 1284 aa10.2□□□□□ -0.78
CBX3-206ENST00000481057 PREX2Q70Z35 1606 aa10.2□□□□□ -0.78
CBX3-206ENST00000481057 ALYREFQ86V81 257 aaKnown RBP10.2□□□□□ -0.78
CBX3-206ENST00000481057 ZFYVE1Q9HBF4 777 aa10.2□□□□□ -0.78
CBX3-206ENST00000481057 MRS2Q9HD23 443 aa10.2□□□□□ -0.78
CBX3-206ENST00000481057 B3GALT4O96024 378 aa10.19□□□□□ -0.78
CBX3-206ENST00000481057 ELNP15502 786 aa10.19□□□□□ -0.78
CBX3-206ENST00000481057 RANGAP1P46060 587 aaPredicted RBP10.19□□□□□ -0.78
CBX3-206ENST00000481057 FAAP100Q0VG06 881 aa10.19□□□□□ -0.78
CBX3-206ENST00000481057 MRPL58Q14197 206 aaKnown RBP10.19□□□□□ -0.78
CBX3-206ENST00000481057 HGSNATQ68CP4 663 aa10.19□□□□□ -0.78
CBX3-206ENST00000481057 GALNT11Q8NCW6 608 aa10.19□□□□□ -0.78
CBX3-206ENST00000481057 SOX17Q9H6I2 414 aaPredicted RBP10.19□□□□□ -0.78
CBX3-206ENST00000481057 OSGEPQ9NPF4 335 aa10.19□□□□□ -0.78
CBX3-206ENST00000481057 SEC31BQ9NQW1 1179 aa10.19□□□□□ -0.78
CBX3-206ENST00000481057 PPM1HQ9ULR3 514 aa10.19□□□□□ -0.78
CBX3-206ENST00000481057 AKAP2Q9Y2D5 859 aa10.19□□□□□ -0.78
CBX3-206ENST00000481057 SYCP2Q9BX26 1530 aa10.18□□□□□ -0.78
CBX3-206ENST00000481057 ERVK-7P63135 1459 aa10.18□□□□□ -0.78
CBX3-206ENST00000481057 TROQ12816 1431 aaPredicted RBP10.18□□□□□ -0.78
CBX3-206ENST00000481057 ITGAEP38570 1179 aa10.18□□□□□ -0.78
CBX3-206ENST00000481057 GPR162Q16538 588 aa10.18□□□□□ -0.78
CBX3-206ENST00000481057 JMYQ8N9B5 988 aa10.18□□□□□ -0.78
CBX3-206ENST00000481057 KLHL23Q8NBE8 558 aa10.18□□□□□ -0.78
CBX3-206ENST00000481057 DCAF11Q8TEB1 546 aa10.18□□□□□ -0.78
CBX3-206ENST00000481057 ANKRD24Q8TF21 1146 aa10.18□□□□□ -0.78
CBX3-206ENST00000481057 SLC7A3Q8WY07 619 aa10.18□□□□□ -0.78
CBX3-206ENST00000481057 BCL11AQ9H165 835 aa10.18□□□□□ -0.78
CBX3-206ENST00000481057 VTI1BQ9UEU0 232 aa10.18□□□□□ -0.78
CBX3-206ENST00000481057 DLL1O00548 723 aa10.17□□□□□ -0.78
CBX3-206ENST00000481057 CTSHP09668 335 aa10.17□□□□□ -0.78
CBX3-206ENST00000481057 C19orf57Q0VDD7 668 aa10.17□□□□□ -0.78
CBX3-206ENST00000481057 KCNMA1Q12791 1236 aa10.17□□□□□ -0.78
CBX3-206ENST00000481057 FOXD4L6Q3SYB3 417 aaPredicted RBP10.17□□□□□ -0.78
CBX3-206ENST00000481057 FOXD4L3Q6VB84 417 aaPredicted RBP10.17□□□□□ -0.78
CBX3-206ENST00000481057 PCNTO95613 3336 aa10.17□□□□□ -0.78
CBX3-206ENST00000481057 CHD2O14647 1828 aaKnown RBP10.17□□□□□ -0.78
CBX3-206ENST00000481057 CLIP1P30622 1438 aa10.16□□□□□ -0.78
CBX3-206ENST00000481057 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.16□□□□□ -0.78
CBX3-206ENST00000481057 DHX29Q7Z478 1369 aaKnown RBP10.16□□□□□ -0.78
CBX3-206ENST00000481057 PARD3Q8TEW0 1356 aa10.16□□□□□ -0.78
CBX3-206ENST00000481057 ARL4DP49703 201 aa10.16□□□□□ -0.78
CBX3-206ENST00000481057 GSK3AP49840 483 aa10.16□□□□□ -0.78
CBX3-206ENST00000481057 KLHDC7BQ96G42 594 aa10.16□□□□□ -0.78
CBX3-206ENST00000481057 CRELD1Q96HD1 420 aa10.16□□□□□ -0.78
CBX3-206ENST00000481057 MYOM1P52179 1685 aa10.15□□□□□ -0.78
CBX3-206ENST00000481057 CD68P34810 354 aaPredicted RBP10.15□□□□□ -0.78
CBX3-206ENST00000481057 SUZ12Q15022 739 aaKnown RBP10.15□□□□□ -0.78
CBX3-206ENST00000481057 GRIK4Q16099 956 aa10.15□□□□□ -0.78
CBX3-206ENST00000481057 GPN3Q9UHW5 284 aaPredicted RBP10.15□□□□□ -0.78
CBX3-206ENST00000481057 TNS1Q9HBL0 1735 aaKnown RBP10.15□□□□□ -0.78
CBX3-206ENST00000481057 ATP10DQ9P241 1426 aa10.15□□□□□ -0.79
CBX3-206ENST00000481057 UNCXA6NJT0 531 aa10.14□□□□□ -0.79
CBX3-206ENST00000481057 ADAM11O75078 769 aa10.14□□□□□ -0.79
CBX3-206ENST00000481057 DCAF5Q96JK2 942 aa10.14□□□□□ -0.79
CBX3-206ENST00000481057 KCNK4Q9NYG8 393 aa10.14□□□□□ -0.79
CBX3-206ENST00000481057 TTF2Q9UNY4 1162 aaKnown RBP10.14□□□□□ -0.79
CBX3-206ENST00000481057 MST1RQ04912 1400 aa10.14□□□□□ -0.79
CBX3-206ENST00000481057 DLC1Q96QB1 1528 aa10.13□□□□□ -0.79
CBX3-206ENST00000481057 FBXO24O75426 580 aa10.13□□□□□ -0.79
CBX3-206ENST00000481057 APBA3O96018 575 aa10.13□□□□□ -0.79
CBX3-206ENST00000481057 RASSF7Q02833 373 aa10.13□□□□□ -0.79
CBX3-206ENST00000481057 GSTM4Q03013 218 aa10.13□□□□□ -0.79
CBX3-206ENST00000481057 MEI1Q5TIA1 1274 aa10.13□□□□□ -0.79
CBX3-206ENST00000481057 SHISA2Q6UWI4 295 aa10.13□□□□□ -0.79
CBX3-206ENST00000481057 TPTE2Q6XPS3 522 aa10.13□□□□□ -0.79
CBX3-206ENST00000481057 NRSN2Q9GZP1 204 aa10.13□□□□□ -0.79
CBX3-206ENST00000481057 FMN1Q68DA7 1419 aa10.13□□□□□ -0.79
CBX3-206ENST00000481057 DDX3YO15523 660 aaKnown RBP10.12□□□□□ -0.79
CBX3-206ENST00000481057 SELPP16109 830 aa10.12□□□□□ -0.79
CBX3-206ENST00000481057 ZNF157P51786 506 aaPredicted RBP10.12□□□□□ -0.79
CBX3-206ENST00000481057 NLRP12P59046 1061 aa10.12□□□□□ -0.79
CBX3-206ENST00000481057 IGF2-ASQ6U949 168 aa10.12□□□□□ -0.79
CBX3-206ENST00000481057 ZNF428Q96B54 188 aa10.12□□□□□ -0.79
CBX3-206ENST00000481057 NECAB3Q96P71 396 aaPredicted RBP10.12□□□□□ -0.79
CBX3-206ENST00000481057 TRIM56Q9BRZ2 755 aaKnown RBP10.12□□□□□ -0.79
CBX3-206ENST00000481057 CEP44Q9C0F1 390 aa10.12□□□□□ -0.79
CBX3-206ENST00000481057 TMEM39AQ9NV64 488 aa10.12□□□□□ -0.79
CBX3-206ENST00000481057 SLIT2O94813 1529 aa10.12□□□□□ -0.79
CBX3-206ENST00000481057 GOLGB1Q14789 3259 aaKnown RBP10.11□□□□□ -0.79
CBX3-206ENST00000481057 MYOM2P54296 1465 aa10.11□□□□□ -0.79
CBX3-206ENST00000481057 PRXQ9BXM0 1461 aa10.11□□□□□ -0.79
CBX3-206ENST00000481057 NUP188Q5SRE5 1749 aa10.11□□□□□ -0.79
CBX3-206ENST00000481057 DCCP43146 1447 aa10.11□□□□□ -0.79
CBX3-206ENST00000481057 KRBA1A5PL33 1030 aa10.11□□□□□ -0.79
CBX3-206ENST00000481057 EIF4EBP3O60516 100 aaPredicted RBP10.11□□□□□ -0.79
CBX3-206ENST00000481057 TRIM37O94972 964 aa10.11□□□□□ -0.79
CBX3-206ENST00000481057 ZBTB7AO95365 584 aa10.11□□□□□ -0.79
CBX3-206ENST00000481057 VAMP1P23763 118 aa10.11□□□□□ -0.79
CBX3-206ENST00000481057 VPS72Q15906 364 aa10.11□□□□□ -0.79
CBX3-206ENST00000481057 DDX54Q8TDD1 881 aaKnown RBP10.11□□□□□ -0.79
CBX3-206ENST00000481057 MRRFQ96E11 262 aaKnown RBP10.11□□□□□ -0.79
CBX3-206ENST00000481057 NACC1Q96RE7 527 aa10.11□□□□□ -0.79
CBX3-206ENST00000481057 MARF1Q9Y4F3 1742 aaKnown RBP10.1□□□□□ -0.79
CBX3-206ENST00000481057 ADGRB2O60241 1585 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms