RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 CNOT6Q9ULM6 557 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-214ENST00000480793 FAM155AB1AL88 458 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-214ENST00000480793 RFXAPO00287 272 aa4.35□□□□□ -1.71
R3HDM1-214ENST00000480793 TRIM13O60858 407 aa4.35□□□□□ -1.71
R3HDM1-214ENST00000480793 ZXDCQ2QGD7 858 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-214ENST00000480793 ZNF385BQ569K4 471 aa4.35□□□□□ -1.71
R3HDM1-214ENST00000480793 TTC6Q86TZ1 520 aa4.35□□□□□ -1.71
R3HDM1-214ENST00000480793 GALNT12Q8IXK2 581 aa4.35□□□□□ -1.71
R3HDM1-214ENST00000480793 MYLIPQ8WY64 445 aa4.35□□□□□ -1.71
R3HDM1-214ENST00000480793 CLP1Q92989 425 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-214ENST00000480793 PRDM5Q9NQX1 630 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-214ENST00000480793 SEMA7AO75326 666 aa4.34□□□□□ -1.71
R3HDM1-214ENST00000480793 GSTP1P09211 210 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-214ENST00000480793 ITPKAP23677 461 aa4.34□□□□□ -1.71
R3HDM1-214ENST00000480793 DLG4P78352 724 aa4.34□□□□□ -1.71
R3HDM1-214ENST00000480793 RNF214Q8ND24 703 aa4.34□□□□□ -1.71
R3HDM1-214ENST00000480793 HSPA12BQ96MM6 686 aa4.34□□□□□ -1.71
R3HDM1-214ENST00000480793 SEMA3GQ9NS98 782 aa4.34□□□□□ -1.71
R3HDM1-214ENST00000480793 SLAMF8Q9P0V8 285 aa4.34□□□□□ -1.71
R3HDM1-214ENST00000480793 MAPK8IP1Q9UQF2 711 aa4.34□□□□□ -1.71
R3HDM1-214ENST00000480793 SUV39H1O43463 412 aa4.33□□□□□ -1.72
R3HDM1-214ENST00000480793 PTPN12Q05209 780 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-214ENST00000480793 CDKAL1Q5VV42 579 aa4.33□□□□□ -1.72
R3HDM1-214ENST00000480793 EHD4Q9H223 541 aa4.33□□□□□ -1.72
R3HDM1-214ENST00000480793 H3BS24 57 aa4.32□□□□□ -1.72
R3HDM1-214ENST00000480793 ATP2B4P23634 1241 aa4.32□□□□□ -1.72
R3HDM1-214ENST00000480793 ERVK-24P63145 666 aa4.32□□□□□ -1.72
R3HDM1-214ENST00000480793 SPATS1Q496A3 300 aa4.32□□□□□ -1.72
R3HDM1-214ENST00000480793 TMEM164Q5U3C3 297 aa4.32□□□□□ -1.72
R3HDM1-214ENST00000480793 KCNB2Q92953 911 aa4.32□□□□□ -1.72
R3HDM1-214ENST00000480793 MCOLN1Q9GZU1 580 aa4.32□□□□□ -1.72
R3HDM1-214ENST00000480793 XYLT2Q9H1B5 865 aa4.32□□□□□ -1.72
R3HDM1-214ENST00000480793 KCTD3Q9Y597 815 aa4.32□□□□□ -1.72
R3HDM1-214ENST00000480793 ZNF157P51786 506 aaPredicted RBP4.31□□□□□ -1.72
R3HDM1-214ENST00000480793 RPS26P11Q5JNZ5 115 aaPredicted RBP4.31□□□□□ -1.72
R3HDM1-214ENST00000480793 KIAA0319Q5VV43 1072 aa4.31□□□□□ -1.72
R3HDM1-214ENST00000480793 TMEM132EQ6IEE7 984 aa4.31□□□□□ -1.72
R3HDM1-214ENST00000480793 IRF2BP1Q8IU81 584 aa4.31□□□□□ -1.72
R3HDM1-214ENST00000480793 MFSD4AQ8N468 514 aa4.31□□□□□ -1.72
R3HDM1-214ENST00000480793 TMEM59LQ9UK28 342 aa4.31□□□□□ -1.72
R3HDM1-214ENST00000480793 OTOL1A6NHN0 477 aaPredicted RBP4.3□□□□□ -1.72
R3HDM1-214ENST00000480793 PEX10O60683 326 aa4.3□□□□□ -1.72
R3HDM1-214ENST00000480793 EOMESO95936 686 aa4.3□□□□□ -1.72
R3HDM1-214ENST00000480793 HPXP02790 462 aa4.3□□□□□ -1.72
R3HDM1-214ENST00000480793 HK2P52789 917 aa4.3□□□□□ -1.72
R3HDM1-214ENST00000480793 ERVFC1P60507 584 aa4.3□□□□□ -1.72
R3HDM1-214ENST00000480793 PUM1Q14671 1186 aaKnown RBP eCLIP4.3□□□□□ -1.72
R3HDM1-214ENST00000480793 ZC3H12AQ5D1E8 599 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-214ENST00000480793 THAP5Q7Z6K1 395 aa4.3□□□□□ -1.72
R3HDM1-214ENST00000480793 ZNF605Q86T29 641 aa4.3□□□□□ -1.72
R3HDM1-214ENST00000480793 SLC6A17Q9H1V8 727 aa4.3□□□□□ -1.72
R3HDM1-214ENST00000480793 PICK1Q9NRD5 415 aa4.3□□□□□ -1.72
R3HDM1-214ENST00000480793 INSRRP14616 1297 aa4.29□□□□□ -1.72
R3HDM1-214ENST00000480793 SFRP5Q5T4F7 317 aa4.29□□□□□ -1.72
R3HDM1-214ENST00000480793 C22orf34Q6ZV56 151 aa4.29□□□□□ -1.72
R3HDM1-214ENST00000480793 GJD3Q8N144 294 aa4.29□□□□□ -1.72
R3HDM1-214ENST00000480793 RNF32Q9H0A6 362 aa4.29□□□□□ -1.72
R3HDM1-214ENST00000480793 TPX2Q9ULW0 747 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-214ENST00000480793 DNAJC25-GNG10A0A024R161 153 aa4.28□□□□□ -1.72
R3HDM1-214ENST00000480793 TEX51A0A1B0GUA7 166 aa4.28□□□□□ -1.72
R3HDM1-214ENST00000480793 MYOCOSA0A1B0GUC4 107 aa4.28□□□□□ -1.72
R3HDM1-214ENST00000480793 PRR33A8MZF0 331 aa4.28□□□□□ -1.72
R3HDM1-214ENST00000480793 PPP2R3AQ06190 1150 aa4.28□□□□□ -1.72
R3HDM1-214ENST00000480793 RALGPS1Q5JS13 557 aa4.28□□□□□ -1.72
R3HDM1-214ENST00000480793 CDC37L1Q7L3B6 337 aa4.28□□□□□ -1.72
R3HDM1-214ENST00000480793 DNAJC25Q9H1X3 360 aa4.28□□□□□ -1.72
R3HDM1-214ENST00000480793 ABCB6Q9NP58 842 aa4.28□□□□□ -1.72
R3HDM1-214ENST00000480793 GPN3Q9UHW5 284 aaPredicted RBP4.28□□□□□ -1.72
R3HDM1-214ENST00000480793 MYRFQ9Y2G1 1151 aa4.28□□□□□ -1.72
R3HDM1-214ENST00000480793 FAM13AO94988 1023 aa4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 ATG7O95352 703 aa4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 NEFLP07196 543 aa4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 FGD1P98174 961 aa4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 FAAP100Q0VG06 881 aa4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 EFEMP1Q12805 493 aa4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 PPM1JQ5JR12 505 aa4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 SP8Q8IXZ3 490 aa4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 KCT2Q8NC54 265 aa4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 FEZF2Q8TBJ5 459 aa4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 GTF3C2Q8WUA4 911 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 UBE2FQ969M7 185 aa4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 ACSBG1Q96GR2 724 aa4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 ST14Q9Y5Y6 855 aa4.27□□□□□ -1.73
R3HDM1-214ENST00000480793 SSPNQ14714 243 aa4.26□□□□□ -1.73
R3HDM1-214ENST00000480793 PRPF40BQ6NWY9 871 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-214ENST00000480793 ARMCX6Q7L4S7 300 aa4.26□□□□□ -1.73
R3HDM1-214ENST00000480793 PDZD3Q86UT5 571 aa4.26□□□□□ -1.73
R3HDM1-214ENST00000480793 ZDHHC14Q8IZN3 488 aa4.26□□□□□ -1.73
R3HDM1-214ENST00000480793 LILRA2Q8N149 483 aa4.26□□□□□ -1.73
R3HDM1-214ENST00000480793 CRELD1Q96HD1 420 aa4.26□□□□□ -1.73
R3HDM1-214ENST00000480793 TEPSINQ96N21 525 aa4.26□□□□□ -1.73
R3HDM1-214ENST00000480793 GPR20Q99678 358 aa4.26□□□□□ -1.73
R3HDM1-214ENST00000480793 NPHS2Q9NP85 383 aa4.26□□□□□ -1.73
R3HDM1-214ENST00000480793 ZSWIM5Q9P217 1185 aa4.26□□□□□ -1.73
R3HDM1-214ENST00000480793 CAPN6Q9Y6Q1 641 aa4.26□□□□□ -1.73
R3HDM1-214ENST00000480793 TMEM238LA0A1B0GVL6 79 aa4.25□□□□□ -1.73
R3HDM1-214ENST00000480793 OVOL3O00110 214 aa4.25□□□□□ -1.73
R3HDM1-214ENST00000480793 AKAP8O43823 692 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-214ENST00000480793 FZD6O60353 706 aa4.25□□□□□ -1.73
R3HDM1-214ENST00000480793 LRIG2O94898 1065 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms