RNA–Protein interactions for RNA: ENST00000480624.5

MACF1-217, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-217ENST00000480624 NBPF9Q3BBW0 867 aa13.36□□□□□ -0.27
MACF1-217ENST00000480624 NOL8Q76FK4 1167 aaKnown RBP13.36□□□□□ -0.27
MACF1-217ENST00000480624 SH3BP5LQ7L8J4 393 aa13.36□□□□□ -0.27
MACF1-217ENST00000480624 AMOTL1Q8IY63 956 aa13.36□□□□□ -0.27
MACF1-217ENST00000480624 TMX3Q96JJ7 454 aa13.36□□□□□ -0.27
MACF1-217ENST00000480624 GPHNQ9NQX3 736 aaPredicted RBP13.36□□□□□ -0.27
MACF1-217ENST00000480624 GPRC5DQ9NZD1 345 aa13.36□□□□□ -0.27
MACF1-217ENST00000480624 LIMCH1Q9UPQ0 1083 aa13.36□□□□□ -0.27
MACF1-217ENST00000480624 LAMB1P07942 1786 aa13.35□□□□□ -0.27
MACF1-217ENST00000480624 ECM29Q5VYK3 1845 aa13.35□□□□□ -0.27
MACF1-217ENST00000480624 CLRN2A0PK11 232 aa13.35□□□□□ -0.27
MACF1-217ENST00000480624 PRDM1O75626 825 aa13.35□□□□□ -0.27
MACF1-217ENST00000480624 DDNO94850 711 aaPredicted RBP13.35□□□□□ -0.27
MACF1-217ENST00000480624 GABPAQ06546 454 aa13.35□□□□□ -0.27
MACF1-217ENST00000480624 TCP10Q12799 353 aa13.35□□□□□ -0.27
MACF1-217ENST00000480624 ANKRD1Q15327 319 aa13.35□□□□□ -0.27
MACF1-217ENST00000480624 TBC1D10BQ4KMP7 808 aaPredicted RBP13.35□□□□□ -0.27
MACF1-217ENST00000480624 RRP12Q5JTH9 1297 aaKnown RBP13.35□□□□□ -0.27
MACF1-217ENST00000480624 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
MACF1-217ENST00000480624 FKBP1CQ5VVH2 108 aa13.35□□□□□ -0.27
MACF1-217ENST00000480624 C16orf86Q6ZW13 317 aa13.35□□□□□ -0.27
MACF1-217ENST00000480624 SAMD7Q7Z3H4 446 aa13.35□□□□□ -0.27
MACF1-217ENST00000480624 TTC6Q86TZ1 520 aa13.35□□□□□ -0.27
MACF1-217ENST00000480624 TOMM22Q9NS69 142 aa13.35□□□□□ -0.27
MACF1-217ENST00000480624 TPCN1Q9ULQ1 816 aa13.35□□□□□ -0.27
MACF1-217ENST00000480624 CNTNAP1P78357 1384 aa13.34□□□□□ -0.27
MACF1-217ENST00000480624 DDTLA6NHG4 134 aaPredicted RBP13.34□□□□□ -0.27
MACF1-217ENST00000480624 LARGE1O95461 756 aa13.34□□□□□ -0.27
MACF1-217ENST00000480624 CDK8P49336 464 aa13.34□□□□□ -0.27
MACF1-217ENST00000480624 PDE4BQ07343 736 aa13.34□□□□□ -0.27
MACF1-217ENST00000480624 CUL4AQ13619 759 aa13.34□□□□□ -0.27
MACF1-217ENST00000480624 SLC44A5Q8NCS7 719 aa13.34□□□□□ -0.27
MACF1-217ENST00000480624 IGDCC4Q8TDY8 1250 aa13.34□□□□□ -0.27
MACF1-217ENST00000480624 FAM151AQ8WW52 585 aa13.34□□□□□ -0.27
MACF1-217ENST00000480624 ESR2Q92731 530 aa13.34□□□□□ -0.27
MACF1-217ENST00000480624 BRF1Q92994 677 aa13.34□□□□□ -0.27
MACF1-217ENST00000480624 ZSCAN31Q96LW9 406 aaPredicted RBP13.34□□□□□ -0.27
MACF1-217ENST00000480624 DAXXQ9UER7 740 aaPredicted RBP13.34□□□□□ -0.27
MACF1-217ENST00000480624 GOLGB1Q14789 3259 aaKnown RBP13.34□□□□□ -0.27
MACF1-217ENST00000480624 ATRNL1Q5VV63 1379 aa13.33□□□□□ -0.27
MACF1-217ENST00000480624 TCP10L2B9ZVM9 353 aa13.33□□□□□ -0.28
MACF1-217ENST00000480624 H7C1D1 291 aa13.33□□□□□ -0.28
MACF1-217ENST00000480624 SH2B2O14492 632 aaPredicted RBP13.33□□□□□ -0.28
MACF1-217ENST00000480624 RANBP6O60518 1105 aaKnown RBP13.33□□□□□ -0.28
MACF1-217ENST00000480624 RASA1P20936 1047 aa13.33□□□□□ -0.28
MACF1-217ENST00000480624 EPS15P42566 896 aa13.33□□□□□ -0.28
MACF1-217ENST00000480624 EVCP57679 992 aa13.33□□□□□ -0.28
MACF1-217ENST00000480624 ME3Q16798 604 aa13.33□□□□□ -0.28
MACF1-217ENST00000480624 TMEM87BQ96K49 555 aa13.33□□□□□ -0.28
MACF1-217ENST00000480624 MTA3Q9BTC8 594 aa13.33□□□□□ -0.28
MACF1-217ENST00000480624 EHD4Q9H223 541 aa13.33□□□□□ -0.28
MACF1-217ENST00000480624 DHX36Q9H2U1 1008 aaKnown RBP13.33□□□□□ -0.28
MACF1-217ENST00000480624 TMOD2Q9NZR1 351 aa13.33□□□□□ -0.28
MACF1-217ENST00000480624 COL2A1P02458 1487 aaPredicted RBP13.33□□□□□ -0.28
MACF1-217ENST00000480624 ASTN2O75129 1339 aaPredicted RBP13.33□□□□□ -0.28
MACF1-217ENST00000480624 MYO1BO43795 1136 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 SLURP2P0DP57 97 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 NT5C2P49902 561 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 APOBRQ0VD83 1088 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 ST3GAL1Q11201 340 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 KIF4BQ2VIQ3 1234 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 METTL16Q86W50 562 aaKnown RBP13.32□□□□□ -0.28
MACF1-217ENST00000480624 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 TRPM4Q8TD43 1214 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 ZKSCAN3Q9BRR0 538 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 LY9Q9HBG7 655 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 MKNK2Q9HBH9 465 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 VEZTQ9HBM0 779 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 SENP2Q9HC62 589 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 PGAP2Q9UHJ9 254 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 SERPINB13Q9UIV8 391 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 BRPF3Q9ULD4 1205 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 MYH1P12882 1939 aa13.32□□□□□ -0.28
MACF1-217ENST00000480624 IFIT3O14879 490 aaKnown RBP13.31□□□□□ -0.28
MACF1-217ENST00000480624 HLA-DOAP06340 250 aa13.31□□□□□ -0.28
MACF1-217ENST00000480624 SHMT1P34896 483 aa13.31□□□□□ -0.28
MACF1-217ENST00000480624 LIFRP42702 1097 aa13.31□□□□□ -0.28
MACF1-217ENST00000480624 HIRAP54198 1017 aaPredicted RBP13.31□□□□□ -0.28
MACF1-217ENST00000480624 FGD1P98174 961 aa13.31□□□□□ -0.28
MACF1-217ENST00000480624 TFAP4Q01664 338 aa13.31□□□□□ -0.28
MACF1-217ENST00000480624 SEC23AQ15436 765 aa13.31□□□□□ -0.28
MACF1-217ENST00000480624 TMEM67Q5HYA8 995 aa13.31□□□□□ -0.28
MACF1-217ENST00000480624 FAM83AQ86UY5 434 aa13.31□□□□□ -0.28
MACF1-217ENST00000480624 FOXP4Q8IVH2 680 aaPredicted RBP13.31□□□□□ -0.28
MACF1-217ENST00000480624 ZSCAN10Q96SZ4 725 aaPredicted RBP13.31□□□□□ -0.28
MACF1-217ENST00000480624 DNAJC18Q9H819 358 aa13.31□□□□□ -0.28
MACF1-217ENST00000480624 SH2B1Q9NRF2 756 aaPredicted RBP13.31□□□□□ -0.28
MACF1-217ENST00000480624 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
MACF1-217ENST00000480624 ANGEL1Q9UNK9 670 aaKnown RBP13.31□□□□□ -0.28
MACF1-217ENST00000480624 ZC3H4Q9UPT8 1303 aaKnown RBP13.31□□□□□ -0.28
MACF1-217ENST00000480624 PDIA3P30101 505 aaKnown RBP13.3□□□□□ -0.28
MACF1-217ENST00000480624 DPY19L2Q6NUT2 758 aa13.3□□□□□ -0.28
MACF1-217ENST00000480624 SGMS1Q86VZ5 419 aa13.3□□□□□ -0.28
MACF1-217ENST00000480624 ZSCAN29Q8IWY8 852 aaPredicted RBP13.3□□□□□ -0.28
MACF1-217ENST00000480624 ZNF444Q8N0Y2 327 aaPredicted RBP13.3□□□□□ -0.28
MACF1-217ENST00000480624 NECAB1Q8N987 351 aa13.3□□□□□ -0.28
MACF1-217ENST00000480624 ZNF274Q96GC6 653 aaPredicted RBP13.3□□□□□ -0.28
MACF1-217ENST00000480624 L3MBTL3Q96JM7 780 aaPredicted RBP13.3□□□□□ -0.28
MACF1-217ENST00000480624 ZNF287Q9HBT7 754 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms