RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 LRRFIP1Q32MZ4 808 aaKnown RBP11.62□□□□□ -0.55
COMMD4-203ENST00000480484 SPATA31A3Q5VYP0 1347 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 NBPF26B4DH59 902 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 CCDC158Q5M9N0 1113 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 NBPF14Q5TI25 921 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 NBPF10Q6P3W6 841 aaKnown RBP11.62□□□□□ -0.55
COMMD4-203ENST00000480484 NBPF15Q8N660 670 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 CHMP4CQ96CF2 233 aa11.62□□□□□ -0.55
COMMD4-203ENST00000480484 ZNF396Q96N95 335 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-203ENST00000480484 RFX5P48382 616 aaPredicted RBP11.61□□□□□ -0.55
COMMD4-203ENST00000480484 NDUFA8P51970 172 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 GNG11P61952 73 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 TIMM10P62072 90 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 ENGASEQ8NFI3 743 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 MRPS27Q92552 414 aaKnown RBP11.61□□□□□ -0.55
COMMD4-203ENST00000480484 DPF2Q92785 391 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 ADAM21Q9UKJ8 722 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 PHLPP2Q6ZVD8 1323 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 A0A087WZG4 1122 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 A0A0U1RQJ8 604 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 SERPINC1P01008 464 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 BDNFP23560 247 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 CASQ1P31415 396 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 PTPN12Q05209 780 aaKnown RBP11.61□□□□□ -0.55
COMMD4-203ENST00000480484 TTLL7Q6ZT98 887 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 ATRIPQ8WXE1 791 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 ZNF594Q96JF6 807 aaPredicted RBP11.61□□□□□ -0.55
COMMD4-203ENST00000480484 RRP15Q9Y3B9 282 aaKnown RBP11.61□□□□□ -0.55
COMMD4-203ENST00000480484 CLIC4Q9Y696 253 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 NHSQ6T4R5 1651 aa11.61□□□□□ -0.55
COMMD4-203ENST00000480484 PTPDC1A2A3K4 754 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 DHX16O60231 1041 aaKnown RBP11.6□□□□□ -0.55
COMMD4-203ENST00000480484 TPM1P09493 284 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 FANCCQ00597 558 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 CFAP100Q494V2 611 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 CCDC181Q5TID7 509 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 TRIM65Q6PJ69 517 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 SRRTQ9BXP5 876 aaKnown RBP11.6□□□□□ -0.55
COMMD4-203ENST00000480484 PCDHA7Q9UN72 937 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 PARP3Q9Y6F1 533 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 BRWD3Q6RI45 1802 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 CCP110O43303 1012 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 SERPINB4P48594 390 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 GTF2A1P52655 376 aaPredicted RBP11.6□□□□□ -0.55
COMMD4-203ENST00000480484 STAG1Q8WVM7 1258 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 PARD6BQ9BYG5 372 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 EFCC1Q9HA90 598 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 KIAA1468Q9P260 1216 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 SPATA31A6Q5VVP1 1343 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 AFDNP55196 1824 aaKnown RBP11.6□□□□□ -0.55
COMMD4-203ENST00000480484 A1BGP04217 495 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 PPP2R3AQ06190 1150 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 STK38Q15208 465 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 BRINP3Q76B58 766 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 PDILTQ8N807 584 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 TOMM22Q9NS69 142 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 VPS18Q9P253 973 aa11.6□□□□□ -0.55
COMMD4-203ENST00000480484 MED23Q9ULK4 1368 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 SLC3A2P08195 630 aaKnown RBP11.59□□□□□ -0.55
COMMD4-203ENST00000480484 SPECC1Q5M775 1068 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 PI16Q6UXB8 463 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 LEKR1Q6ZMV7 388 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 SRLQ86TD4 932 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 REXO1L1PQ8IX06 675 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 NSUN7Q8NE18 718 aaKnown RBP11.59□□□□□ -0.55
COMMD4-203ENST00000480484 FBXO18Q8NFZ0 1043 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 GOLGA5Q8TBA6 731 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 HMG20BQ9P0W2 317 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 MAGEC2Q9UBF1 373 aaPredicted RBP11.59□□□□□ -0.55
COMMD4-203ENST00000480484 MRC1P22897 1456 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 H3BQF6 201 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 HOXA2O43364 376 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 TUBB4AP04350 444 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 MARCKSP29966 332 aaPredicted RBP11.59□□□□□ -0.55
COMMD4-203ENST00000480484 UBASH3AP57075 661 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 KRT32Q14532 448 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 TOM1L2Q6ZVM7 507 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 FMR1NBQ8N0W7 255 aaPredicted RBP11.59□□□□□ -0.55
COMMD4-203ENST00000480484 WDR24Q96S15 920 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 INCENPQ9NQS7 918 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 PRDM11Q9NQV5 511 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 LY75O60449 1722 aa11.59□□□□□ -0.55
COMMD4-203ENST00000480484 TMEM232C9JQI7 657 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 ANKRD65E5RJM6 399 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 GOLIM4O00461 696 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 FDPSP14324 419 aaKnown RBP11.58□□□□□ -0.56
COMMD4-203ENST00000480484 SKIDA1Q1XH10 827 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 TNNI3KQ59H18 835 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 LMBR1LQ6UX01 489 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 NOP9Q86U38 636 aaKnown RBP11.58□□□□□ -0.56
COMMD4-203ENST00000480484 JAZF1Q86VZ6 243 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 GPR161Q8N6U8 529 aaKnown RBP11.58□□□□□ -0.56
COMMD4-203ENST00000480484 SGIP1Q9BQI5 828 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 ZBTB3Q9H5J0 574 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 HDAC5Q9UQL6 1122 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 FPGT-TNNI3KV9GXZ4 949 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 NEDD4P46934 1319 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 KIF28PB7ZC32 967 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 ATP8B1O43520 1251 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms