RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 UBL4BQ8N7F7 174 aa15.22■□□□□ 0.03
MCF2L-225ENST00000480321 DDX23Q9BUQ8 820 aaKnown RBP15.22■□□□□ 0.03
MCF2L-225ENST00000480321 ZNF174Q15697 407 aa15.22■□□□□ 0.03
MCF2L-225ENST00000480321 SEC62Q99442 399 aaKnown RBP15.22■□□□□ 0.03
MCF2L-225ENST00000480321 NDUFAB1O14561 156 aa15.22■□□□□ 0.03
MCF2L-225ENST00000480321 SLC9C1Q4G0N8 1177 aa15.22■□□□□ 0.03
MCF2L-225ENST00000480321 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
MCF2L-225ENST00000480321 TLDC2A0PJX2 215 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 PUM3Q15397 648 aaKnown RBP15.21■□□□□ 0.03
MCF2L-225ENST00000480321 SYCE1Q8N0S2 351 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 CCDC63Q8NA47 563 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 PLCB1Q9NQ66 1216 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 GNPATO15228 680 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 GCP02774 474 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 ELF2Q15723 593 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 TAOK1Q7L7X3 1001 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 CSGALNACT2Q8N6G5 542 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 CIB2O75838 187 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 INPP5BP32019 993 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 TRAPPC3LQ5T215 181 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 FYB2Q5VWT5 728 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 TXNDC16Q9P2K2 825 aa15.21■□□□□ 0.03
MCF2L-225ENST00000480321 POSTNQ15063 836 aa15.21■□□□□ 0.02
MCF2L-225ENST00000480321 TTC38Q5R3I4 469 aa15.21■□□□□ 0.02
MCF2L-225ENST00000480321 TNFAIP3P21580 790 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 WHAMMP3Q1A5X7 153 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 PARP10Q53GL7 1025 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 CCDC84Q86UT8 332 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-225ENST00000480321 KRT24Q2M2I5 525 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 DIS3L2Q8IYB7 885 aaKnown RBP15.2■□□□□ 0.02
MCF2L-225ENST00000480321 VPS16Q9H269 839 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 ASXL2Q76L83 1435 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 GOLGA6BA6NDN3 693 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 BACH1O14867 736 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 CETN3O15182 167 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 SP4Q02446 784 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 RAPGEF1Q13905 1077 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 MAP7D1Q3KQU3 841 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 AKNAD1Q5T1N1 836 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 KRT25Q7Z3Z0 450 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 STMN2Q93045 179 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.2■□□□□ 0.02
MCF2L-225ENST00000480321 ARHGEF10O15013 1369 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 KDM5DQ9BY66 1539 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 POLR2DO15514 142 aaKnown RBP15.2■□□□□ 0.02
MCF2L-225ENST00000480321 RAB3IL1Q8TBN0 382 aa15.2■□□□□ 0.02
MCF2L-225ENST00000480321 ABCC4O15439 1325 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 CPA1P15085 419 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 SH2D4AQ9H788 454 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 MAP3K19Q56UN5 1328 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 IBTKQ9P2D0 1353 aaPredicted RBP15.19■□□□□ 0.02
MCF2L-225ENST00000480321 B4E1Z4 1266 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 NOL3O60936 208 aaKnown RBP15.19■□□□□ 0.02
MCF2L-225ENST00000480321 RXRAP19793 462 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 ADALQ6DHV7 355 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 G2E3Q7L622 706 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 CACNA2D3Q8IZS8 1091 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 OTUD7AQ8TE49 926 aaPredicted RBP15.19■□□□□ 0.02
MCF2L-225ENST00000480321 IGSF3O75054 1194 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 CFAP221Q4G0U5 840 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 APBB1IPQ7Z5R6 666 aaPredicted RBP15.19■□□□□ 0.02
MCF2L-225ENST00000480321 CCDC25Q86WR0 208 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 LMNTD2Q8IXW0 634 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 ZBTB9Q96C00 473 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 NFE2L3Q9Y4A8 694 aa15.19■□□□□ 0.02
MCF2L-225ENST00000480321 GBP1P32455 592 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 DCAF17Q5H9S7 520 aaPredicted RBP15.18■□□□□ 0.02
MCF2L-225ENST00000480321 SPATS2Q86XZ4 545 aaKnown RBP15.18■□□□□ 0.02
MCF2L-225ENST00000480321 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.18■□□□□ 0.02
MCF2L-225ENST00000480321 PPFIA4O75335 1185 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 ERCC5P28715 1186 aaPredicted RBP15.18■□□□□ 0.02
MCF2L-225ENST00000480321 ADAMTS12P58397 1594 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 WDR44Q5JSH3 913 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 CNBD1Q8NA66 436 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 ZNF274Q96GC6 653 aaPredicted RBP15.18■□□□□ 0.02
MCF2L-225ENST00000480321 VIMP08670 466 aaKnown RBP15.18■□□□□ 0.02
MCF2L-225ENST00000480321 LETM2Q2VYF4 491 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 LIN9Q5TKA1 542 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 MAIP1Q8WWC4 291 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 BTG4Q9NY30 223 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 SAP30BPQ9UHR5 308 aaKnown RBP15.18■□□□□ 0.02
MCF2L-225ENST00000480321 EXOC7Q9UPT5 735 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 FAM135BQ49AJ0 1406 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 ERCC6LQ2NKX8 1250 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 ZKSCAN3Q9BRR0 538 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 DNAJC5BQ9UF47 199 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 ABCC2Q92887 1545 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 TEX11Q8IYF3 940 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 TRIML1Q8N9V2 468 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 PLIN2Q99541 437 aa15.18■□□□□ 0.02
MCF2L-225ENST00000480321 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
MCF2L-225ENST00000480321 GPAA1O43292 621 aa15.17■□□□□ 0.02
MCF2L-225ENST00000480321 GADD45BO75293 160 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-225ENST00000480321 INF2Q27J81 1249 aa15.17■□□□□ 0.02
MCF2L-225ENST00000480321 TMEM63CQ9P1W3 806 aa15.17■□□□□ 0.02
MCF2L-225ENST00000480321 PARP2Q9UGN5 583 aa15.17■□□□□ 0.02
MCF2L-225ENST00000480321 SPOPO43791 374 aa15.17■□□□□ 0.02
MCF2L-225ENST00000480321 GNA14O95837 355 aa15.17■□□□□ 0.02
MCF2L-225ENST00000480321 ATP5JP18859 108 aa15.17■□□□□ 0.02
MCF2L-225ENST00000480321 ARID4AP29374 1257 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms