RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 UPF2Q9HAU5 1272 aaKnown RBP10.67□□□□□ -0.7
NUDCD3-208ENST00000480209 NMRK2Q9NPI5 230 aa10.67□□□□□ -0.7
NUDCD3-208ENST00000480209 ANAPC4Q9UJX5 808 aa10.67□□□□□ -0.7
NUDCD3-208ENST00000480209 TRPM7Q96QT4 1865 aa10.66□□□□□ -0.7
NUDCD3-208ENST00000480209 MYO1BO43795 1136 aa10.66□□□□□ -0.7
NUDCD3-208ENST00000480209 GABPAQ06546 454 aa10.66□□□□□ -0.7
NUDCD3-208ENST00000480209 IMMTQ16891 758 aaKnown RBP10.66□□□□□ -0.7
NUDCD3-208ENST00000480209 FAM151AQ8WW52 585 aa10.66□□□□□ -0.7
NUDCD3-208ENST00000480209 DYNLL2Q96FJ2 89 aa10.66□□□□□ -0.7
NUDCD3-208ENST00000480209 TMOD2Q9NZR1 351 aa10.66□□□□□ -0.7
NUDCD3-208ENST00000480209 CTNNA3Q9UI47 895 aa10.66□□□□□ -0.7
NUDCD3-208ENST00000480209 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.66□□□□□ -0.7
NUDCD3-208ENST00000480209 PITPNM2Q9BZ72 1349 aa10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 ADM5C9JUS6 153 aa10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 ZNF213O14771 459 aa10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 EIF5BO60841 1220 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 PRDM1O75626 825 aa10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 POLR3DP05423 398 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 MCCP23508 829 aa10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 ANTXR2P58335 489 aa10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 ANAPC15P60006 121 aa10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 RASA3Q14644 834 aa10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 SHROOM1Q2M3G4 852 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 TSGA10IPQ3SY00 556 aa10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 EAPPQ56P03 285 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 USP50Q70EL3 339 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 FAM83AQ86UY5 434 aa10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 APOBEC3FQ8IUX4 373 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 MB21D2Q8IYB1 491 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 STAG1Q8WVM7 1258 aa10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 JAKMIP1Q96N16 626 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 UPF3BQ9BZI7 483 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 RRAGCQ9HB90 399 aa10.65□□□□□ -0.7
NUDCD3-208ENST00000480209 IQCA1LA6NCM1 817 aa10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 CD2BP2O95400 341 aaKnown RBP10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 FGRP09769 529 aa10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 SHMT1P34896 483 aa10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 AKNAD1Q5T1N1 836 aa10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 RNF20Q5VTR2 975 aa10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 PRAMEF18Q5VWM3 479 aa10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 C16orf86Q6ZW13 317 aa10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 DDRGK1Q96HY6 314 aa10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 TCEANC2Q96MN5 208 aa10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 CSRNP1Q96S65 589 aa10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 DEFB129Q9H1M3 183 aa10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 EHD4Q9H223 541 aa10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 PTPRFP10586 1907 aa10.64□□□□□ -0.71
NUDCD3-208ENST00000480209 B4E1Z4 1266 aa10.63□□□□□ -0.71
NUDCD3-208ENST00000480209 ORC4O43929 436 aa10.63□□□□□ -0.71
NUDCD3-208ENST00000480209 CASTP20810 708 aaKnown RBP10.63□□□□□ -0.71
NUDCD3-208ENST00000480209 RRP1BQ14684 758 aaKnown RBP10.63□□□□□ -0.71
NUDCD3-208ENST00000480209 NBPF12Q5TAG4 269 aaPredicted RBP10.63□□□□□ -0.71
NUDCD3-208ENST00000480209 CYB5R4Q7L1T6 521 aa10.63□□□□□ -0.71
NUDCD3-208ENST00000480209 CHST3Q7LGC8 479 aa10.63□□□□□ -0.71
NUDCD3-208ENST00000480209 METTL16Q86W50 562 aaKnown RBP10.63□□□□□ -0.71
NUDCD3-208ENST00000480209 ZSCAN29Q8IWY8 852 aaPredicted RBP10.63□□□□□ -0.71
NUDCD3-208ENST00000480209 TTC14Q96N46 770 aa10.63□□□□□ -0.71
NUDCD3-208ENST00000480209 FZD1Q9UP38 647 aa10.63□□□□□ -0.71
NUDCD3-208ENST00000480209 HLA-DOAP06340 250 aa10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 ZKSCAN1P17029 563 aaPredicted RBP10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 RASA1P20936 1047 aa10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 TNNI2P48788 182 aa10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 CDK8P49336 464 aa10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 JAG1P78504 1218 aa10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 TNFAIP1Q13829 316 aa10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 FAM47AQ5JRC9 791 aa10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 RRP12Q5JTH9 1297 aaKnown RBP10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 SAMD1Q6SPF0 538 aaPredicted RBP10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 TTC6Q86TZ1 520 aa10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 LRRC2Q9BYS8 371 aa10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 TM6SF1Q9BZW5 370 aa10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 DHX36Q9H2U1 1008 aaKnown RBP10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 ZSWIM6Q9HCJ5 1215 aa10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 GPHNQ9NQX3 736 aaPredicted RBP10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 SERPINB13Q9UIV8 391 aa10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 PLIN4Q96Q06 1357 aa10.62□□□□□ -0.71
NUDCD3-208ENST00000480209 KDM4AO75164 1064 aa10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 AKR1B1P15121 316 aa10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 VEGFAP15692 232 aaPredicted RBP10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 RPS6KB1P23443 525 aa10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 FMR1Q06787 632 aaKnown RBP eCLIP10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 KRT32Q14532 448 aa10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 MAP1SQ66K74 1059 aaPredicted RBP10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 MFSD6Q6ZSS7 791 aa10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 KRT26Q7Z3Y9 468 aa10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 USP48Q86UV5 1035 aa10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 PNMA8AQ86V59 439 aaPredicted RBP10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 AMOTL1Q8IY63 956 aa10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 NCOA7Q8NI08 942 aa10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 ZC3H15Q8WU90 426 aaKnown RBP10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 NEK1Q96PY6 1258 aa10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 GLIS2Q9BZE0 524 aaPredicted RBP10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 PI4KBQ9UBF8 816 aa10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 RBM19Q9Y4C8 960 aaKnown RBP10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 PPP2R3BQ9Y5P8 575 aa10.61□□□□□ -0.71
NUDCD3-208ENST00000480209 TRAF5O00463 557 aa10.6□□□□□ -0.71
NUDCD3-208ENST00000480209 NMT2O60551 498 aa10.6□□□□□ -0.71
NUDCD3-208ENST00000480209 GDF11O95390 407 aa10.6□□□□□ -0.71
NUDCD3-208ENST00000480209 EXOSC10Q01780 885 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms