RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 ALX1Q15699 326 aa11.51□□□□□ -0.57
CD46-214ENST00000480003 CCDC129Q6ZRS4 1044 aa11.51□□□□□ -0.57
CD46-214ENST00000480003 TEX11Q8IYF3 940 aa11.51□□□□□ -0.57
CD46-214ENST00000480003 NOL10Q9BSC4 688 aaKnown RBP11.51□□□□□ -0.57
CD46-214ENST00000480003 ESYT1Q9BSJ8 1104 aa11.51□□□□□ -0.57
CD46-214ENST00000480003 DDX4Q9NQI0 724 aaKnown RBP11.51□□□□□ -0.57
CD46-214ENST00000480003 CLRN2A0PK11 232 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 MYO1BO43795 1136 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 GTPBP6O43824 516 aaPredicted RBP11.5□□□□□ -0.57
CD46-214ENST00000480003 ENTPD3O75355 529 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 HSPD1P10809 573 aaKnown RBP11.5□□□□□ -0.57
CD46-214ENST00000480003 GNAT2P19087 354 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 FOXK1P85037 733 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 C8orf34Q49A92 452 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 GIMAP6Q6P9H5 292 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 FAM83AQ86UY5 434 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 ZFPM1Q8IX07 1006 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 TGFBRAP1Q8WUH2 860 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 CRNKL1Q9BZJ0 848 aaKnown RBP11.5□□□□□ -0.57
CD46-214ENST00000480003 DCP1AQ9NPI6 582 aaPredicted RBP11.5□□□□□ -0.57
CD46-214ENST00000480003 GPHNQ9NQX3 736 aaPredicted RBP11.5□□□□□ -0.57
CD46-214ENST00000480003 ATP8A2Q9NTI2 1148 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 PCDHGA4Q9Y5G9 962 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 SCN4AP35499 1836 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 RAD50Q92878 1312 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 PITPNM2Q9BZ72 1349 aa11.5□□□□□ -0.57
CD46-214ENST00000480003 RPAP1Q9BWH6 1393 aaPredicted RBP11.5□□□□□ -0.57
CD46-214ENST00000480003 CACNB3P54284 484 aa11.49□□□□□ -0.57
CD46-214ENST00000480003 MFAP1P55081 439 aaKnown RBP11.49□□□□□ -0.57
CD46-214ENST00000480003 VPS53Q5VIR6 699 aa11.49□□□□□ -0.57
CD46-214ENST00000480003 ANGEL2Q5VTE6 544 aaKnown RBP11.49□□□□□ -0.57
CD46-214ENST00000480003 IFNL3Q8IZI9 196 aa11.49□□□□□ -0.57
CD46-214ENST00000480003 SDR42E1Q8WUS8 393 aa11.49□□□□□ -0.57
CD46-214ENST00000480003 FAM151AQ8WW52 585 aa11.49□□□□□ -0.57
CD46-214ENST00000480003 SLC4A4Q9Y6R1 1079 aa11.49□□□□□ -0.57
CD46-214ENST00000480003 CCDC171Q6TFL3 1326 aa11.49□□□□□ -0.57
CD46-214ENST00000480003 TCP10L2B9ZVM9 353 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 FGAP02671 866 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 NUDT7P0C024 238 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 PTH1RQ03431 593 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 RASA3Q14644 834 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 SBK1Q52WX2 424 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 EAPPQ56P03 285 aaPredicted RBP11.48□□□□□ -0.57
CD46-214ENST00000480003 CASC1Q6TDU7 716 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 SH3BP5LQ7L8J4 393 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 LDHDQ86WU2 507 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 APOBEC3FQ8IUX4 373 aaKnown RBP11.48□□□□□ -0.57
CD46-214ENST00000480003 MAPKAPK5Q8IW41 473 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 MAP4K1Q92918 833 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 DCPSQ96C86 337 aaKnown RBP11.48□□□□□ -0.57
CD46-214ENST00000480003 TEPSINQ96N21 525 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 DSCC1Q9BVC3 393 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 LSG1Q9H089 658 aaKnown RBP11.48□□□□□ -0.57
CD46-214ENST00000480003 DEFB129Q9H1M3 183 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 EPB41L4AQ9HCS5 686 aaPredicted RBP11.48□□□□□ -0.57
CD46-214ENST00000480003 GGA3Q9NZ52 723 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 TMOD2Q9NZR1 351 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 CNTNAP1P78357 1384 aa11.48□□□□□ -0.57
CD46-214ENST00000480003 FLT1P17948 1338 aa11.47□□□□□ -0.57
CD46-214ENST00000480003 DDTLA6NHG4 134 aaPredicted RBP11.47□□□□□ -0.57
CD46-214ENST00000480003 USP5P45974 858 aa11.47□□□□□ -0.57
CD46-214ENST00000480003 MAP3K10Q02779 954 aa11.47□□□□□ -0.57
CD46-214ENST00000480003 MMRN1Q13201 1228 aa11.47□□□□□ -0.57
CD46-214ENST00000480003 TNFAIP1Q13829 316 aa11.47□□□□□ -0.57
CD46-214ENST00000480003 DSG2Q14126 1118 aa11.47□□□□□ -0.57
CD46-214ENST00000480003 CTR9Q6PD62 1173 aa11.47□□□□□ -0.57
CD46-214ENST00000480003 CDC37L1Q7L3B6 337 aa11.47□□□□□ -0.57
CD46-214ENST00000480003 USP48Q86UV5 1035 aa11.47□□□□□ -0.57
CD46-214ENST00000480003 METTL16Q86W50 562 aaKnown RBP11.47□□□□□ -0.57
CD46-214ENST00000480003 PLPP6Q8IY26 295 aa11.47□□□□□ -0.57
CD46-214ENST00000480003 OSBPL5Q9H0X9 879 aaPredicted RBP11.47□□□□□ -0.57
CD46-214ENST00000480003 VEZTQ9HBM0 779 aa11.47□□□□□ -0.57
CD46-214ENST00000480003 SCAF8Q9UPN6 1271 aaKnown RBP11.47□□□□□ -0.57
CD46-214ENST00000480003 MYH7P12883 1935 aa11.47□□□□□ -0.57
CD46-214ENST00000480003 USP17L12C9JPN9 530 aa11.46□□□□□ -0.57
CD46-214ENST00000480003 USP17L21D6R901 530 aa11.46□□□□□ -0.57
CD46-214ENST00000480003 EPB41L2O43491 1005 aaKnown RBP11.46□□□□□ -0.57
CD46-214ENST00000480003 ITGBL1O95965 494 aaPredicted RBP11.46□□□□□ -0.57
CD46-214ENST00000480003 TNNI2P48788 182 aa11.46□□□□□ -0.57
CD46-214ENST00000480003 TCP10Q12799 353 aa11.46□□□□□ -0.57
CD46-214ENST00000480003 PICALMQ13492 652 aa11.46□□□□□ -0.57
CD46-214ENST00000480003 C12orf60Q5U649 245 aa11.46□□□□□ -0.57
CD46-214ENST00000480003 USP26Q9BXU7 913 aa11.46□□□□□ -0.57
CD46-214ENST00000480003 TMEM39BQ9GZU3 492 aa11.46□□□□□ -0.57
CD46-214ENST00000480003 DHX36Q9H2U1 1008 aaKnown RBP11.46□□□□□ -0.57
CD46-214ENST00000480003 PPP2R3BQ9Y5P8 575 aa11.46□□□□□ -0.57
CD46-214ENST00000480003 POLR2AP24928 1970 aaKnown RBP11.46□□□□□ -0.58
CD46-214ENST00000480003 APPP05067 770 aa11.45□□□□□ -0.58
CD46-214ENST00000480003 PLCD1P51178 756 aa11.45□□□□□ -0.58
CD46-214ENST00000480003 NECTIN1Q15223 517 aa11.45□□□□□ -0.58
CD46-214ENST00000480003 MAP1SQ66K74 1059 aaPredicted RBP11.45□□□□□ -0.58
CD46-214ENST00000480003 DLK2Q6UY11 383 aa11.45□□□□□ -0.58
CD46-214ENST00000480003 KRT26Q7Z3Y9 468 aa11.45□□□□□ -0.58
CD46-214ENST00000480003 FOXP4Q8IVH2 680 aaPredicted RBP11.45□□□□□ -0.58
CD46-214ENST00000480003 ZNF687Q8N1G0 1237 aa11.45□□□□□ -0.58
CD46-214ENST00000480003 RBM46Q8TBY0 533 aaKnown RBP11.45□□□□□ -0.58
CD46-214ENST00000480003 NACAP1Q9BZK3 213 aa11.45□□□□□ -0.58
CD46-214ENST00000480003 MCM9Q9NXL9 1143 aa11.45□□□□□ -0.58
CD46-214ENST00000480003 PALD1Q9ULE6 856 aa11.45□□□□□ -0.58
CD46-214ENST00000480003 MAST2Q6P0Q8 1798 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms