RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 PDE3AQ14432 1141 aa5.63□□□□□ -1.51
NF1-209ENST00000479536 SF3A1Q15459 793 aaKnown RBP5.63□□□□□ -1.51
NF1-209ENST00000479536 KCNMB1Q16558 191 aa5.63□□□□□ -1.51
NF1-209ENST00000479536 IFI16Q16666 785 aaKnown RBP5.63□□□□□ -1.51
NF1-209ENST00000479536 ANGEL2Q5VTE6 544 aaKnown RBP5.63□□□□□ -1.51
NF1-209ENST00000479536 LCNL1Q6ZST4 164 aa5.63□□□□□ -1.51
NF1-209ENST00000479536 ZSWIM9Q86XI8 627 aa5.63□□□□□ -1.51
NF1-209ENST00000479536 LRRC56Q8IYG6 542 aaPredicted RBP5.63□□□□□ -1.51
NF1-209ENST00000479536 CCDC74AQ96AQ1 378 aa5.63□□□□□ -1.51
NF1-209ENST00000479536 HRASLS5Q96KN8 279 aa5.63□□□□□ -1.51
NF1-209ENST00000479536 TGIF2Q9GZN2 237 aa5.63□□□□□ -1.51
NF1-209ENST00000479536 ZFYVE28Q9HCC9 887 aa5.63□□□□□ -1.51
NF1-209ENST00000479536 FAM53CQ9NYF3 392 aa5.63□□□□□ -1.51
NF1-209ENST00000479536 U3KQE9 123 aa5.63□□□□□ -1.51
NF1-209ENST00000479536 SPRED3Q2MJR0 410 aa5.62□□□□□ -1.51
NF1-209ENST00000479536 PI16Q6UXB8 463 aa5.62□□□□□ -1.51
NF1-209ENST00000479536 C1QL4Q86Z23 238 aa5.62□□□□□ -1.51
NF1-209ENST00000479536 FLAD1Q8NFF5 587 aa5.62□□□□□ -1.51
NF1-209ENST00000479536 EPS8L3Q8TE67 593 aaKnown RBP5.62□□□□□ -1.51
NF1-209ENST00000479536 TRIM56Q9BRZ2 755 aaKnown RBP5.62□□□□□ -1.51
NF1-209ENST00000479536 WDR18Q9BV38 432 aa5.62□□□□□ -1.51
NF1-209ENST00000479536 PPP1R1BQ9UD71 204 aaPredicted RBP5.62□□□□□ -1.51
NF1-209ENST00000479536 PPP1R9AQ9ULJ8 1098 aa5.62□□□□□ -1.51
NF1-209ENST00000479536 ZNF503-AS2A6NEH8 195 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 GIPC1O14908 333 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 TSPAN15O95858 294 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 ZSCAN22P10073 491 aaPredicted RBP5.61□□□□□ -1.51
NF1-209ENST00000479536 SLC23A3Q6PIS1 610 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 ANKLE2Q86XL3 938 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 DDX54Q8TDD1 881 aaKnown RBP5.61□□□□□ -1.51
NF1-209ENST00000479536 UBXN4Q92575 508 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 PPP1R16BQ96T49 567 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 OSBPL7Q9BZF2 842 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 C12orf49Q9H741 205 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 CCSER2Q9H7U1 834 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 PIDD1Q9HB75 910 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 PRDM7Q9NQW5 492 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 NLRP2Q9NX02 1062 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 LMCD1Q9NZU5 365 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 CRIM1Q9NZV1 1036 aa5.61□□□□□ -1.51
NF1-209ENST00000479536 TMEM265A0A087WTH1 108 aa5.6□□□□□ -1.51
NF1-209ENST00000479536 CEACAM5P06731 702 aa5.6□□□□□ -1.51
NF1-209ENST00000479536 BUD31P41223 144 aaPredicted RBP5.6□□□□□ -1.51
NF1-209ENST00000479536 GRIA4P48058 902 aa5.6□□□□□ -1.51
NF1-209ENST00000479536 LIN37Q96GY3 246 aaPredicted RBP5.6□□□□□ -1.51
NF1-209ENST00000479536 TINF2Q9BSI4 451 aa5.6□□□□□ -1.51
NF1-209ENST00000479536 ACBD3Q9H3P7 528 aa5.6□□□□□ -1.51
NF1-209ENST00000479536 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.6□□□□□ -1.51
NF1-209ENST00000479536 LEFTY1O75610 366 aa5.59□□□□□ -1.51
NF1-209ENST00000479536 SYDE1Q6ZW31 735 aaPredicted RBP5.59□□□□□ -1.51
NF1-209ENST00000479536 SIAH1Q8IUQ4 282 aa5.59□□□□□ -1.51
NF1-209ENST00000479536 CCNJLQ8IV13 435 aa5.59□□□□□ -1.51
NF1-209ENST00000479536 LIN7BQ9HAP6 207 aa5.59□□□□□ -1.51
NF1-209ENST00000479536 CAPN10Q9HC96 672 aa5.59□□□□□ -1.51
NF1-209ENST00000479536 NPHS2Q9NP85 383 aa5.59□□□□□ -1.51
NF1-209ENST00000479536 FAM8A1Q9UBU6 413 aa5.59□□□□□ -1.51
NF1-209ENST00000479536 PLAGL2Q9UPG8 496 aa5.59□□□□□ -1.51
NF1-209ENST00000479536 USP31Q70CQ4 1352 aa5.58□□□□□ -1.52
NF1-209ENST00000479536 A0A1W2PP55 124 aa5.58□□□□□ -1.52
NF1-209ENST00000479536 TMPRSS2O15393 492 aa5.58□□□□□ -1.52
NF1-209ENST00000479536 ITIH2P19823 946 aa5.58□□□□□ -1.52
NF1-209ENST00000479536 OXCT1P55809 520 aa5.58□□□□□ -1.52
NF1-209ENST00000479536 PTPN12Q05209 780 aaKnown RBP5.58□□□□□ -1.52
NF1-209ENST00000479536 GALNT12Q8IXK2 581 aa5.58□□□□□ -1.52
NF1-209ENST00000479536 SLC43A3Q8NBI5 491 aa5.58□□□□□ -1.52
NF1-209ENST00000479536 BCO2Q9BYV7 579 aa5.58□□□□□ -1.52
NF1-209ENST00000479536 SRCIN1Q9C0H9 1055 aa5.58□□□□□ -1.52
NF1-209ENST00000479536 MKNK2Q9HBH9 465 aa5.58□□□□□ -1.52
NF1-209ENST00000479536 DDX41Q9UJV9 622 aaKnown RBP5.58□□□□□ -1.52
NF1-209ENST00000479536 GADD45BO75293 160 aaPredicted RBP5.57□□□□□ -1.52
NF1-209ENST00000479536 B3GALT4O96024 378 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 USP17L7P0C7H9 530 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 LIG1P18858 919 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 TNNI2P48788 182 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 GNL2Q13823 731 aaKnown RBP5.57□□□□□ -1.52
NF1-209ENST00000479536 TAF1CQ15572 869 aaPredicted RBP5.57□□□□□ -1.52
NF1-209ENST00000479536 ZNF394Q53GI3 561 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 MEI1Q5TIA1 1274 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 NXPE4Q6UWF7 544 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 HS2ST1Q7LGA3 356 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 USP48Q86UV5 1035 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 SMYD4Q8IYR2 804 aaPredicted RBP5.57□□□□□ -1.52
NF1-209ENST00000479536 ZNF654Q8IZM8 581 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 FANCD2OSQ96PS1 177 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 TCF12Q99081 682 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 DUSP23Q9BVJ7 150 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 TANGO6Q9C0B7 1094 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 ATXN3LQ9H3M9 355 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 PCDHGB7Q9Y5F8 929 aa5.57□□□□□ -1.52
NF1-209ENST00000479536 SYNGAP1Q96PV0 1343 aa5.56□□□□□ -1.52
NF1-209ENST00000479536 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.56□□□□□ -1.52
NF1-209ENST00000479536 RNGTTO60942 597 aaKnown RBP5.56□□□□□ -1.52
NF1-209ENST00000479536 ST13P50502 369 aaKnown RBP5.56□□□□□ -1.52
NF1-209ENST00000479536 RACK1P63244 317 aaKnown RBP5.56□□□□□ -1.52
NF1-209ENST00000479536 IKZF1Q13422 519 aa5.56□□□□□ -1.52
NF1-209ENST00000479536 FYB2Q5VWT5 728 aa5.56□□□□□ -1.52
NF1-209ENST00000479536 MPZL3Q6UWV2 235 aa5.56□□□□□ -1.52
NF1-209ENST00000479536 PRR23BQ6ZRT6 265 aa5.56□□□□□ -1.52
NF1-209ENST00000479536 TTLL10Q6ZVT0 673 aa5.56□□□□□ -1.52
NF1-209ENST00000479536 WDR89Q96FK6 387 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms