RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 FAM217BQ9NTX9 383 aaPredicted RBP15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 PCDHA5Q9Y5H7 936 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 SH2B2O14492 632 aaPredicted RBP15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 ARHGAP6O43182 974 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 PDE8AO60658 829 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 CASQ1P31415 396 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 PPP2R3AQ06190 1150 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 RASGRF1Q13972 1273 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 KRBA2Q6ZNG9 492 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 MAGEB6Q8N7X4 407 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 KIFC2Q96AC6 838 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 DHX58Q96C10 678 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 ACSBG1Q96GR2 724 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 BAG1Q99933 345 aaPredicted RBP15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 ANGEL1Q9UNK9 670 aaKnown RBP15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 IQSEC3Q9UPP2 1182 aaPredicted RBP15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 MRFAP1Q9Y605 127 aa15.26■□□□□ 0.03
PDZRN3-208ENST00000479530 SLIT2O94813 1529 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 A0A0U1RQJ8 604 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 CBFA2T2O43439 604 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 RANBP6O60518 1105 aaKnown RBP15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 MTF1Q14872 753 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 KARSQ15046 597 aaKnown RBP15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 RSRC2Q7L4I2 434 aaKnown RBP15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 TC2NQ8N9U0 490 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 IGDCC4Q8TDY8 1250 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 ATRIPQ8WXE1 791 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 ZKSCAN3Q9BRR0 538 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 ALG1Q9BT22 464 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 BCL9O00512 1426 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 ZSCAN12O43309 604 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 FGFR2P21802 821 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 METAP2P50579 478 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 BCAMP50895 628 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 APOA5Q6Q788 366 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 CMTR1Q8N1G2 835 aaKnown RBP15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 FUT8Q9BYC5 575 aa15.25■□□□□ 0.03
PDZRN3-208ENST00000479530 DHX16O60231 1041 aaKnown RBP15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 MBD4O95243 580 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 FMR1Q06787 632 aaKnown RBP eCLIP15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 TRDNQ13061 729 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 TBX2Q13207 712 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 DHX8Q14562 1220 aaKnown RBP15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 ZNF827Q17R98 1081 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 TRMT44Q8IYL2 757 aaKnown RBP15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 ZNF34Q8IZ26 560 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 CCDC82Q8N4S0 544 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 MPHOSPH8Q99549 860 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 MAP3K14Q99558 947 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 ZSWIM5Q9P217 1185 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 FEZ2Q9UHY8 353 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 H3BQF6 201 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 GUCY1A2P33402 732 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 UBE3CQ15386 1083 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 KRT40Q6A162 431 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 GPR161Q8N6U8 529 aaKnown RBP15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 AIDAQ96BJ3 306 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 AKAP11Q9UKA4 1901 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 ARID4AP29374 1257 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 SMIM5Q71RC9 77 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 MIGA1Q8NAN2 632 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 SPATA5Q8NB90 893 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 MRPL44Q9H9J2 332 aaKnown RBP15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 LY9Q9HBG7 655 aa15.24■□□□□ 0.03
PDZRN3-208ENST00000479530 MYO5AQ9Y4I1 1855 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 EXOC5O00471 708 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 GRIN1Q05586 938 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 NTRK3Q16288 839 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 RESP18Q5W5W9 173 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 TRIM34Q9BYJ4 488 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 ARFGAP3Q9NP61 516 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 LCMT1Q9UIC8 334 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 ZMYM6O95789 1325 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 TFRCP02786 760 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 PUM3Q15397 648 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 RRP12Q5JTH9 1297 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 INTS5Q6P9B9 1019 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 OLFM4Q6UX06 510 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 NFXL1Q6ZNB6 911 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 FCHSD1Q86WN1 690 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 IFNL3Q8IZI9 196 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 CNNM3Q8NE01 707 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 LPIN2Q92539 896 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 MED15Q96RN5 788 aa15.23■□□□□ 0.03
PDZRN3-208ENST00000479530 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
PDZRN3-208ENST00000479530 TMEM67Q5HYA8 995 aa15.22■□□□□ 0.03
PDZRN3-208ENST00000479530 GRAMD1CQ8IYS0 662 aa15.22■□□□□ 0.03
PDZRN3-208ENST00000479530 ZNF512BQ96KM6 892 aaPredicted RBP15.22■□□□□ 0.03
PDZRN3-208ENST00000479530 KCNH3Q9ULD8 1083 aa15.22■□□□□ 0.03
PDZRN3-208ENST00000479530 ATP8B1O43520 1251 aa15.22■□□□□ 0.03
PDZRN3-208ENST00000479530 TPM1P09493 284 aa15.22■□□□□ 0.03
PDZRN3-208ENST00000479530 TXLNBQ8N3L3 684 aa15.22■□□□□ 0.03
PDZRN3-208ENST00000479530 LCORLQ8N3X6 602 aa15.22■□□□□ 0.03
PDZRN3-208ENST00000479530 CHMP4CQ96CF2 233 aa15.22■□□□□ 0.03
PDZRN3-208ENST00000479530 NFE2L3Q9Y4A8 694 aa15.22■□□□□ 0.03
PDZRN3-208ENST00000479530 GSG1L2A8MUP6 293 aa15.21■□□□□ 0.03
PDZRN3-208ENST00000479530 PPP6R2O75170 966 aa15.21■□□□□ 0.03
PDZRN3-208ENST00000479530 TTF1Q15361 905 aaPredicted RBP15.21■□□□□ 0.03
PDZRN3-208ENST00000479530 ZSCAN26Q16670 478 aa15.21■□□□□ 0.03
PDZRN3-208ENST00000479530 LONRF2Q1L5Z9 754 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms