RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.76□□□□□ -0.85
USP30-206ENST00000479219 LAMB1P07942 1786 aa9.76□□□□□ -0.85
USP30-206ENST00000479219 KIAA1551Q9HCM1 1747 aa9.76□□□□□ -0.85
USP30-206ENST00000479219 ZBTB22O15209 634 aa9.76□□□□□ -0.85
USP30-206ENST00000479219 PPFIA3O75145 1194 aa9.76□□□□□ -0.85
USP30-206ENST00000479219 MMP1P03956 469 aa9.76□□□□□ -0.85
USP30-206ENST00000479219 PTPAQ15257 358 aa9.76□□□□□ -0.85
USP30-206ENST00000479219 SAMD1Q6SPF0 538 aaPredicted RBP9.76□□□□□ -0.85
USP30-206ENST00000479219 MAP3K14Q99558 947 aa9.76□□□□□ -0.85
USP30-206ENST00000479219 SLC26A6Q9BXS9 759 aa9.76□□□□□ -0.85
USP30-206ENST00000479219 OSBPL5Q9H0X9 879 aaPredicted RBP9.76□□□□□ -0.85
USP30-206ENST00000479219 SEC31BQ9NQW1 1179 aa9.76□□□□□ -0.85
USP30-206ENST00000479219 CGNQ9P2M7 1197 aaKnown RBP9.76□□□□□ -0.85
USP30-206ENST00000479219 TUBE1Q9UJT0 475 aa9.76□□□□□ -0.85
USP30-206ENST00000479219 CACNA1SQ13698 1873 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 CCDC88AQ3V6T2 1871 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 MAGEB6P1A0A0J9YX57 407 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 CALM1P0DP23 149 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 CALM2P0DP24 149 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 CALM3P0DP25 149 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 KCNJ6P48051 423 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 BCAMP50895 628 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 NCBP1Q09161 790 aaKnown RBP9.75□□□□□ -0.85
USP30-206ENST00000479219 ZNF771Q7L3S4 317 aaPredicted RBP9.75□□□□□ -0.85
USP30-206ENST00000479219 KRI1Q8N9T8 703 aaKnown RBP9.75□□□□□ -0.85
USP30-206ENST00000479219 FAM217BQ9NTX9 383 aaPredicted RBP9.75□□□□□ -0.85
USP30-206ENST00000479219 BSDC1Q9NW68 430 aaPredicted RBP9.75□□□□□ -0.85
USP30-206ENST00000479219 DENND2AQ9ULE3 1009 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 DUOX1Q9NRD9 1551 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 COL24A1Q17RW2 1714 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 CBFA2T2O43439 604 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 RANBP6O60518 1105 aaKnown RBP9.75□□□□□ -0.85
USP30-206ENST00000479219 TUBB4AP04350 444 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 CTDSPL2Q05D32 466 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 PPARAQ07869 468 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 RAB11FIP4Q86YS3 637 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 LCORLQ8N3X6 602 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 MARCH10Q8NA82 808 aaPredicted RBP9.75□□□□□ -0.85
USP30-206ENST00000479219 ZNF579Q8NAF0 562 aaKnown RBP9.75□□□□□ -0.85
USP30-206ENST00000479219 CACTINQ8WUQ7 758 aaKnown RBP9.75□□□□□ -0.85
USP30-206ENST00000479219 PHKBQ93100 1093 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 BRIP1Q9BX63 1249 aa9.75□□□□□ -0.85
USP30-206ENST00000479219 CNTNAP4Q9C0A0 1308 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 CYP7A1P22680 504 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 ITPK1Q13572 414 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 DPCR1Q3MIW9 517 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 KANK3Q6NY19 840 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 RNF26Q9BY78 433 aaPredicted RBP9.74□□□□□ -0.85
USP30-206ENST00000479219 NYXQ9GZU5 481 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 RBM28Q9NW13 759 aaKnown RBP9.74□□□□□ -0.85
USP30-206ENST00000479219 NRBP1Q9UHY1 535 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 MROH7-TTC4A0A0A0MT08 1334 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 WDHD1O75717 1129 aaPredicted RBP9.74□□□□□ -0.85
USP30-206ENST00000479219 BMP15O95972 392 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 OLFM4Q6UX06 510 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 FANCBQ8NB91 859 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 IPO4Q8TEX9 1081 aaKnown RBP9.74□□□□□ -0.85
USP30-206ENST00000479219 TOMM22Q9NS69 142 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 DACH1Q9UI36 760 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 MYH2Q9UKX2 1941 aa9.74□□□□□ -0.85
USP30-206ENST00000479219 CCP110O43303 1012 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 SKILP12757 684 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 AKAP17AQ02040 695 aaKnown RBP9.73□□□□□ -0.85
USP30-206ENST00000479219 LRMPQ12912 555 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 TPD52L1Q16890 204 aaPredicted RBP9.73□□□□□ -0.85
USP30-206ENST00000479219 ZNF654Q8IZM8 581 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 CRACR2BQ8N4Y2 399 aaPredicted RBP9.73□□□□□ -0.85
USP30-206ENST00000479219 RXRAP19793 462 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 MARCKSP29966 332 aaPredicted RBP9.73□□□□□ -0.85
USP30-206ENST00000479219 MYL5Q02045 173 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 CCDC144BQ3MJ40 725 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 RRP12Q5JTH9 1297 aaKnown RBP9.73□□□□□ -0.85
USP30-206ENST00000479219 SLC10A5Q5PT55 438 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 SHC4Q6S5L8 630 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 IQCA1Q86XH1 822 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 CCDC144CPQ8IYA2 1237 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 AIFM3Q96NN9 605 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 GJB4Q9NTQ9 266 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 RAI14Q9P0K7 980 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 KCNH3Q9ULD8 1083 aa9.73□□□□□ -0.85
USP30-206ENST00000479219 A0A0G2JS52 829 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 DIS3L2Q8IYB7 885 aaKnown RBP9.72□□□□□ -0.85
USP30-206ENST00000479219 ACSBG1Q96GR2 724 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 ANKRD2Q9GZV1 360 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 SENP2Q9HC62 589 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 DDX41Q9UJV9 622 aaKnown RBP9.72□□□□□ -0.85
USP30-206ENST00000479219 TNNT1P13805 278 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 CT47A1Q5JQC4 288 aaPredicted RBP9.72□□□□□ -0.85
USP30-206ENST00000479219 KRBA2Q6ZNG9 492 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 CATIPQ7Z7H3 387 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 NBPF11Q86T75 865 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 TRIML1Q8N9V2 468 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 CNNM3Q8NE01 707 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 CCDC112Q8NEF3 446 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 BRMS1Q9HCU9 246 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 PRKAB2O43741 272 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 DDAH1O94760 285 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 SMC2O95347 1197 aa9.72□□□□□ -0.85
USP30-206ENST00000479219 SFPQP23246 707 aaKnown RBP eCLIP9.72□□□□□ -0.85
USP30-206ENST00000479219 FILIP1Q7Z7B0 1213 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms