RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 SLC9C2Q5TAH2 1124 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 FOXR1Q6PIV2 292 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 CYB5R4Q7L1T6 521 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 GRAMD1CQ8IYS0 662 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 WDR24Q96S15 920 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 BSDC1Q9NW68 430 aaPredicted RBP12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 USP8P40818 1118 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 METTL16Q86W50 562 aaKnown RBP12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 TBC1D10CQ8IV04 446 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 CMTR1Q8N1G2 835 aaKnown RBP12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 APPBP2Q92624 585 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 KCND1Q9NSA2 647 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 IKBKBO14920 756 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 GRIN1Q05586 938 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 TADA2BQ86TJ2 420 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 PROSER2Q86WR7 435 aaPredicted RBP12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 IRX2Q9BZI1 471 aaPredicted RBP12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 KCNH3Q9ULD8 1083 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 ANGEL1Q9UNK9 670 aaKnown RBP12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 PPP2R2CQ9Y2T4 447 aa12.59□□□□□ -0.39
LRRFIP1-211ENST00000478958 TRIM29Q14134 588 aa12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 CCDC102BQ68D86 513 aa12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 VSTM4Q8IW00 320 aa12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 SLC26A6Q9BXS9 759 aa12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 GPR108Q9NPR9 543 aa12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 CBFA2T2O43439 604 aa12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 SASH3O75995 380 aa12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 NEBLO76041 1014 aa12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 BMP6P22004 513 aa12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 LRRFIP1Q32MZ4 808 aaKnown RBP12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 RRP12Q5JTH9 1297 aaKnown RBP12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 TTC19Q6DKK2 380 aaPredicted RBP12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 TOGARAM2Q6ZUX3 1019 aa12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 CPLX3Q8WVH0 158 aa12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 INTS13Q9NVM9 706 aa12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 PARP3Q9Y6F1 533 aa12.58□□□□□ -0.4
LRRFIP1-211ENST00000478958 VWA3AA6NCI4 1184 aa12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 TBC1D8O95759 1140 aa12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 GPTP24298 496 aa12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 IARSP41252 1262 aaKnown RBP12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 METTL24Q5JXM2 366 aa12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 APOA5Q6Q788 366 aa12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 BAG1Q99933 345 aaPredicted RBP12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 ZKSCAN3Q9BRR0 538 aa12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 NBPF3Q9H094 633 aa12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 MKRN1Q9UHC7 482 aaKnown RBP12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 TUBE1Q9UJT0 475 aa12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 KCNJ14Q9UNX9 436 aa12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 C5P01031 1676 aa12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 A0A087WUV0 522 aaPredicted RBP12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 TADA3O75528 432 aa12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 ARID4AP29374 1257 aaPredicted RBP12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 CPLX2Q6PUV4 134 aaKnown RBP12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 NFE2L3Q9Y4A8 694 aa12.57□□□□□ -0.4
LRRFIP1-211ENST00000478958 GOLGA8AA7E2F4 631 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 BTBD18B2RXH4 712 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 ZBTB43O43298 467 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 MCAMP43121 646 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 MTF1Q14872 753 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 PTPAQ15257 358 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 NAIF1Q69YI7 327 aaPredicted RBP12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 KLHL10Q6JEL2 608 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 SLC24A3Q9HC58 644 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 LAMA4Q16363 1823 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 KIF13AQ9H1H9 1805 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 PHLPP2Q6ZVD8 1323 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 POLR2DO15514 142 aaKnown RBP12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 CCP110O43303 1012 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 ZSCAN12O43309 604 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 ZFYP08048 801 aaPredicted RBP12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 FMR1Q06787 632 aaKnown RBP eCLIP12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 TMEM67Q5HYA8 995 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 GBP6Q6ZN66 633 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 ITFG2Q969R8 447 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 LZTFL1Q9NQ48 299 aa12.56□□□□□ -0.4
LRRFIP1-211ENST00000478958 RANBP6O60518 1105 aaKnown RBP12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 GUCY1A2P33402 732 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 IFIT5Q13325 482 aaKnown RBP12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 LDHAL6AQ6ZMR3 332 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 MIEF2Q96C03 454 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 BORCS6Q96GS4 357 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 SAMSN1Q9NSI8 373 aaKnown RBP12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 HPSEQ9Y251 543 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 AKAP2Q9Y2D5 859 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 ZMYM6O95789 1325 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 ARHGAP6O43182 974 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 RPS6KA5O75582 802 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 STX17P56962 302 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 CTDSPL2Q05D32 466 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 RESP18Q5W5W9 173 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 ABCC6O95255 1503 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 SNAP23O00161 211 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 SETQ01105 290 aaPredicted RBP12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 PPP2R3AQ06190 1150 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 CCDC12Q8WUD4 166 aaPredicted RBP12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 MAP3K14Q99558 947 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 CNNM1Q9NRU3 951 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 SERTAD1Q9UHV2 236 aa12.55□□□□□ -0.4
LRRFIP1-211ENST00000478958 UBN2Q6ZU65 1347 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms