RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 PDE6AP16499 860 aa22.86■■□□□ 1.25
SREBF1-212ENST00000478616 CTU1Q7Z7A3 348 aaKnown RBP22.86■■□□□ 1.25
SREBF1-212ENST00000478616 ADGRA2Q96PE1 1338 aa22.85■■□□□ 1.25
SREBF1-212ENST00000478616 FKTNO75072 461 aa22.85■■□□□ 1.25
SREBF1-212ENST00000478616 BAG3O95817 575 aa22.85■■□□□ 1.25
SREBF1-212ENST00000478616 EVX2Q03828 476 aa22.85■■□□□ 1.25
SREBF1-212ENST00000478616 SNAPC2Q13487 334 aa22.85■■□□□ 1.25
SREBF1-212ENST00000478616 GPAT2Q6NUI2 795 aa22.85■■□□□ 1.25
SREBF1-212ENST00000478616 DNAJC2Q99543 621 aaKnown RBP22.85■■□□□ 1.25
SREBF1-212ENST00000478616 HAUS7Q99871 368 aa22.85■■□□□ 1.25
SREBF1-212ENST00000478616 PALD1Q9ULE6 856 aa22.85■■□□□ 1.25
SREBF1-212ENST00000478616 AFG3L2Q9Y4W6 797 aa22.85■■□□□ 1.25
SREBF1-212ENST00000478616 BAZ2AQ9UIF9 1905 aaKnown RBP22.84■■□□□ 1.25
SREBF1-212ENST00000478616 CTNND1O60716 968 aaKnown RBP22.84■■□□□ 1.25
SREBF1-212ENST00000478616 CETPP11597 493 aa22.84■■□□□ 1.25
SREBF1-212ENST00000478616 OTUD7AQ8TE49 926 aaPredicted RBP22.84■■□□□ 1.25
SREBF1-212ENST00000478616 PLCG2P16885 1265 aa22.83■■□□□ 1.25
SREBF1-212ENST00000478616 MAP3K12Q12852 859 aa22.83■■□□□ 1.25
SREBF1-212ENST00000478616 TSHZ3Q63HK5 1081 aa22.83■■□□□ 1.25
SREBF1-212ENST00000478616 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.83■■□□□ 1.25
SREBF1-212ENST00000478616 SAP30BPQ9UHR5 308 aaKnown RBP22.83■■□□□ 1.25
SREBF1-212ENST00000478616 ZHX2Q9Y6X8 837 aa22.83■■□□□ 1.25
SREBF1-212ENST00000478616 ZNF532Q9HCE3 1301 aa22.82■■□□□ 1.24
SREBF1-212ENST00000478616 SLC9C2Q5TAH2 1124 aa22.82■■□□□ 1.24
SREBF1-212ENST00000478616 PAG1Q9NWQ8 432 aa22.82■■□□□ 1.24
SREBF1-212ENST00000478616 A0A0G2JLL6 359 aaPredicted RBP22.81■■□□□ 1.24
SREBF1-212ENST00000478616 CXCL11O14625 94 aa22.81■■□□□ 1.24
SREBF1-212ENST00000478616 ADD2P35612 726 aa22.81■■□□□ 1.24
SREBF1-212ENST00000478616 TTF1Q15361 905 aaPredicted RBP22.81■■□□□ 1.24
SREBF1-212ENST00000478616 TAF1CQ15572 869 aaPredicted RBP22.81■■□□□ 1.24
SREBF1-212ENST00000478616 PRRT2Q7Z6L0 340 aaPredicted RBP22.81■■□□□ 1.24
SREBF1-212ENST00000478616 NOL10Q9BSC4 688 aaKnown RBP22.81■■□□□ 1.24
SREBF1-212ENST00000478616 PI4KBQ9UBF8 816 aa22.81■■□□□ 1.24
SREBF1-212ENST00000478616 SALL3Q9BXA9 1300 aa22.81■■□□□ 1.24
SREBF1-212ENST00000478616 CAP2P40123 477 aa22.8■■□□□ 1.24
SREBF1-212ENST00000478616 SLC4A8Q2Y0W8 1093 aa22.8■■□□□ 1.24
SREBF1-212ENST00000478616 OTUD7BQ6GQQ9 843 aa22.8■■□□□ 1.24
SREBF1-212ENST00000478616 ANKRD23Q86SG2 305 aa22.8■■□□□ 1.24
SREBF1-212ENST00000478616 LCORLQ8N3X6 602 aa22.8■■□□□ 1.24
SREBF1-212ENST00000478616 CD99L2Q8TCZ2 262 aa22.8■■□□□ 1.24
SREBF1-212ENST00000478616 DHX36Q9H2U1 1008 aaKnown RBP22.8■■□□□ 1.24
SREBF1-212ENST00000478616 ZCCHC17Q9NP64 241 aaKnown RBP22.8■■□□□ 1.24
SREBF1-212ENST00000478616 MGAMO43451 1857 aa22.79■■□□□ 1.24
SREBF1-212ENST00000478616 CTGFP29279 349 aa22.79■■□□□ 1.24
SREBF1-212ENST00000478616 TMED8Q6PL24 325 aaPredicted RBP22.79■■□□□ 1.24
SREBF1-212ENST00000478616 OTOP1Q7RTM1 612 aa22.79■■□□□ 1.24
SREBF1-212ENST00000478616 HERC5Q9UII4 1024 aaKnown RBP22.79■■□□□ 1.24
SREBF1-212ENST00000478616 SMIM22K7EJ46 135 aa22.78■■□□□ 1.24
SREBF1-212ENST00000478616 TLR2O60603 784 aa22.78■■□□□ 1.24
SREBF1-212ENST00000478616 ECHDC1Q9NTX5 307 aa22.78■■□□□ 1.24
SREBF1-212ENST00000478616 HPS5Q9UPZ3 1129 aa22.78■■□□□ 1.24
SREBF1-212ENST00000478616 MAGEB6P1A0A0J9YX57 407 aa22.77■■□□□ 1.24
SREBF1-212ENST00000478616 PDHXO00330 501 aa22.77■■□□□ 1.24
SREBF1-212ENST00000478616 PLCD1P51178 756 aa22.77■■□□□ 1.24
SREBF1-212ENST00000478616 SP3Q02447 781 aa22.77■■□□□ 1.24
SREBF1-212ENST00000478616 C17orf99Q6UX52 265 aa22.77■■□□□ 1.24
SREBF1-212ENST00000478616 ARHGAP39Q9C0H5 1083 aa22.77■■□□□ 1.24
SREBF1-212ENST00000478616 ZFYVE28Q9HCC9 887 aa22.77■■□□□ 1.24
SREBF1-212ENST00000478616 PICK1Q9NRD5 415 aa22.77■■□□□ 1.24
SREBF1-212ENST00000478616 CCDC85CA6NKD9 419 aa22.76■■□□□ 1.23
SREBF1-212ENST00000478616 PRKAB2O43741 272 aa22.76■■□□□ 1.23
SREBF1-212ENST00000478616 FOXP4Q8IVH2 680 aaPredicted RBP22.76■■□□□ 1.23
SREBF1-212ENST00000478616 PI4K2BQ8TCG2 481 aa22.76■■□□□ 1.23
SREBF1-212ENST00000478616 SDR42E1Q8WUS8 393 aa22.76■■□□□ 1.23
SREBF1-212ENST00000478616 ARMT1Q9H993 441 aa22.76■■□□□ 1.23
SREBF1-212ENST00000478616 CENPFP49454 3210 aa22.75■■□□□ 1.23
SREBF1-212ENST00000478616 TRIM75PA6NK02 468 aa22.75■■□□□ 1.23
SREBF1-212ENST00000478616 GABPAQ06546 454 aa22.75■■□□□ 1.23
SREBF1-212ENST00000478616 TATDN1Q6P1N9 297 aa22.75■■□□□ 1.23
SREBF1-212ENST00000478616 DOCK3Q8IZD9 2030 aa22.75■■□□□ 1.23
SREBF1-212ENST00000478616 MYH8P13535 1937 aa22.74■■□□□ 1.23
SREBF1-212ENST00000478616 GDF11O95390 407 aa22.74■■□□□ 1.23
SREBF1-212ENST00000478616 CYP2C8P10632 490 aa22.74■■□□□ 1.23
SREBF1-212ENST00000478616 CYP2D6P10635 497 aa22.74■■□□□ 1.23
SREBF1-212ENST00000478616 USP5P45974 858 aa22.74■■□□□ 1.23
SREBF1-212ENST00000478616 HDAC1Q13547 482 aaPredicted RBP22.74■■□□□ 1.23
SREBF1-212ENST00000478616 TREML2Q5T2D2 321 aa22.74■■□□□ 1.23
SREBF1-212ENST00000478616 FBXO46Q6PJ61 603 aaPredicted RBP22.74■■□□□ 1.23
SREBF1-212ENST00000478616 CERS3Q8IU89 383 aa22.74■■□□□ 1.23
SREBF1-212ENST00000478616 EXOC6Q8TAG9 804 aa22.74■■□□□ 1.23
SREBF1-212ENST00000478616 PUS7LQ9H0K6 701 aaKnown RBP22.74■■□□□ 1.23
SREBF1-212ENST00000478616 EHD4Q9H223 541 aa22.74■■□□□ 1.23
SREBF1-212ENST00000478616 DCP1AQ9NPI6 582 aaPredicted RBP22.74■■□□□ 1.23
SREBF1-212ENST00000478616 TRIM17Q9Y577 477 aa22.74■■□□□ 1.23
SREBF1-212ENST00000478616 SHMT1P34896 483 aa22.73■■□□□ 1.23
SREBF1-212ENST00000478616 SPP2Q13103 211 aa22.73■■□□□ 1.23
SREBF1-212ENST00000478616 UBE3CQ15386 1083 aa22.73■■□□□ 1.23
SREBF1-212ENST00000478616 CPA4Q9UI42 421 aa22.73■■□□□ 1.23
SREBF1-212ENST00000478616 MBD4O95243 580 aa22.72■■□□□ 1.23
SREBF1-212ENST00000478616 BCRP11274 1271 aa22.72■■□□□ 1.23
SREBF1-212ENST00000478616 PKN2Q16513 984 aaKnown RBP22.72■■□□□ 1.23
SREBF1-212ENST00000478616 ZNF280CQ8ND82 737 aa22.72■■□□□ 1.23
SREBF1-212ENST00000478616 ERO1AQ96HE7 468 aa22.72■■□□□ 1.23
SREBF1-212ENST00000478616 ZBTB21Q9ULJ3 1066 aa22.72■■□□□ 1.23
SREBF1-212ENST00000478616 RGS19P49795 217 aa22.71■■□□□ 1.23
SREBF1-212ENST00000478616 SH3D19Q5HYK7 790 aa22.71■■□□□ 1.23
SREBF1-212ENST00000478616 KBTBD3Q8NAB2 608 aa22.71■■□□□ 1.23
SREBF1-212ENST00000478616 WDR18Q9BV38 432 aa22.71■■□□□ 1.23
SREBF1-212ENST00000478616 PTPN22Q9Y2R2 807 aa22.71■■□□□ 1.23
SREBF1-212ENST00000478616 USP17L5A8MUK1 530 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms