RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CELA3AP09093 270 aa7.13□□□□□ -1.27
CDC42BPA-212ENST00000478573 LRRC14Q15048 493 aa7.13□□□□□ -1.27
CDC42BPA-212ENST00000478573 HEXIM2Q96MH2 286 aaKnown RBP7.13□□□□□ -1.27
CDC42BPA-212ENST00000478573 PRDM10Q9NQV6 1147 aa7.13□□□□□ -1.27
CDC42BPA-212ENST00000478573 MBNL3Q9NUK0 354 aaKnown RBP7.13□□□□□ -1.27
CDC42BPA-212ENST00000478573 SPG7Q9UQ90 795 aa7.13□□□□□ -1.27
CDC42BPA-212ENST00000478573 C8AP07357 584 aa7.12□□□□□ -1.27
CDC42BPA-212ENST00000478573 IKZF1Q13422 519 aa7.12□□□□□ -1.27
CDC42BPA-212ENST00000478573 FZD5Q13467 585 aa7.12□□□□□ -1.27
CDC42BPA-212ENST00000478573 ZBTB37Q5TC79 503 aa7.12□□□□□ -1.27
CDC42BPA-212ENST00000478573 RASIP1Q5U651 963 aa7.12□□□□□ -1.27
CDC42BPA-212ENST00000478573 PCNX4Q63HM2 1172 aa7.12□□□□□ -1.27
CDC42BPA-212ENST00000478573 POU5F2Q8N7G0 328 aa7.12□□□□□ -1.27
CDC42BPA-212ENST00000478573 LRRN4CLQ8ND94 238 aa7.12□□□□□ -1.27
CDC42BPA-212ENST00000478573 FAM168AQ92567 244 aa7.12□□□□□ -1.27
CDC42BPA-212ENST00000478573 PRDM7Q9NQW5 492 aa7.12□□□□□ -1.27
CDC42BPA-212ENST00000478573 CCDC9Q9Y3X0 531 aaKnown RBP7.12□□□□□ -1.27
CDC42BPA-212ENST00000478573 ARID1BQ8NFD5 2236 aaPredicted RBP7.12□□□□□ -1.27
CDC42BPA-212ENST00000478573 GNAT3A8MTJ3 354 aa7.11□□□□□ -1.27
CDC42BPA-212ENST00000478573 USP17L7P0C7H9 530 aa7.11□□□□□ -1.27
CDC42BPA-212ENST00000478573 NTF4P34130 210 aa7.11□□□□□ -1.27
CDC42BPA-212ENST00000478573 ZNF648Q5T619 568 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-212ENST00000478573 ATG4DQ86TL0 474 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-212ENST00000478573 ASB16Q96NS5 453 aa7.11□□□□□ -1.27
CDC42BPA-212ENST00000478573 C12orf49Q9H741 205 aa7.11□□□□□ -1.27
CDC42BPA-212ENST00000478573 CACNA2D2Q9NY47 1150 aa7.11□□□□□ -1.27
CDC42BPA-212ENST00000478573 TTF2Q9UNY4 1162 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-212ENST00000478573 GIPC1O14908 333 aa7.1□□□□□ -1.27
CDC42BPA-212ENST00000478573 FANCGO15287 622 aa7.1□□□□□ -1.27
CDC42BPA-212ENST00000478573 ARMCX6Q7L4S7 300 aa7.1□□□□□ -1.27
CDC42BPA-212ENST00000478573 FAM8A1Q9UBU6 413 aa7.1□□□□□ -1.27
CDC42BPA-212ENST00000478573 CARMIL2Q6F5E8 1435 aa7.1□□□□□ -1.27
CDC42BPA-212ENST00000478573 LRFN4Q6PJG9 635 aa7.09□□□□□ -1.27
CDC42BPA-212ENST00000478573 SPACA3Q8IXA5 215 aa7.09□□□□□ -1.27
CDC42BPA-212ENST00000478573 KCT2Q8NC54 265 aa7.09□□□□□ -1.27
CDC42BPA-212ENST00000478573 ZNF507Q8TCN5 953 aa7.09□□□□□ -1.27
CDC42BPA-212ENST00000478573 ASB11Q8WXH4 323 aa7.09□□□□□ -1.27
CDC42BPA-212ENST00000478573 TNKS2Q9H2K2 1166 aa7.09□□□□□ -1.27
CDC42BPA-212ENST00000478573 PRDM5Q9NQX1 630 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-212ENST00000478573 CYP8B1Q9UNU6 501 aa7.09□□□□□ -1.27
CDC42BPA-212ENST00000478573 SNX11Q9Y5W9 270 aa7.09□□□□□ -1.27
CDC42BPA-212ENST00000478573 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-212ENST00000478573 IGF2BP3O00425 579 aaKnown RBP eCLIP7.08□□□□□ -1.28
CDC42BPA-212ENST00000478573 LDHBP07195 334 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-212ENST00000478573 P4HBP07237 508 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-212ENST00000478573 ZP2Q05996 745 aa7.08□□□□□ -1.28
CDC42BPA-212ENST00000478573 INPP5AQ14642 412 aa7.08□□□□□ -1.28
CDC42BPA-212ENST00000478573 SLC23A3Q6PIS1 610 aa7.08□□□□□ -1.28
CDC42BPA-212ENST00000478573 FAM214BQ7L5A3 538 aa7.08□□□□□ -1.28
CDC42BPA-212ENST00000478573 GZF1Q9H116 711 aaPredicted RBP7.08□□□□□ -1.28
CDC42BPA-212ENST00000478573 EOMESO95936 686 aa7.07□□□□□ -1.28
CDC42BPA-212ENST00000478573 ETF1P62495 437 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-212ENST00000478573 PTPN11Q06124 597 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-212ENST00000478573 RING1Q06587 406 aa7.07□□□□□ -1.28
CDC42BPA-212ENST00000478573 TMCO4Q5TGY1 634 aa7.07□□□□□ -1.28
CDC42BPA-212ENST00000478573 HDXQ7Z353 690 aa7.07□□□□□ -1.28
CDC42BPA-212ENST00000478573 PLPPR2Q96GM1 343 aa7.07□□□□□ -1.28
CDC42BPA-212ENST00000478573 MIPEPQ99797 713 aa7.07□□□□□ -1.28
CDC42BPA-212ENST00000478573 FOXQ1Q9C009 403 aa7.07□□□□□ -1.28
CDC42BPA-212ENST00000478573 TPX2Q9ULW0 747 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-212ENST00000478573 LRIG2O94898 1065 aa7.06□□□□□ -1.28
CDC42BPA-212ENST00000478573 LMNB1P20700 586 aa7.06□□□□□ -1.28
CDC42BPA-212ENST00000478573 JAG1P78504 1218 aa7.06□□□□□ -1.28
CDC42BPA-212ENST00000478573 ZNF124Q15973 351 aa7.06□□□□□ -1.28
CDC42BPA-212ENST00000478573 NKPD1Q17RQ9 610 aa7.06□□□□□ -1.28
CDC42BPA-212ENST00000478573 WIPI1Q5MNZ9 446 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-212ENST00000478573 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-212ENST00000478573 FBRSQ9HAH7 460 aa7.06□□□□□ -1.28
CDC42BPA-212ENST00000478573 FAM155AB1AL88 458 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-212ENST00000478573 CLCN7P51798 805 aa7.05□□□□□ -1.28
CDC42BPA-212ENST00000478573 CDKAL1Q5VV42 579 aa7.05□□□□□ -1.28
CDC42BPA-212ENST00000478573 SCARA3Q6AZY7 606 aa7.05□□□□□ -1.28
CDC42BPA-212ENST00000478573 SV2BQ7L1I2 683 aa7.05□□□□□ -1.28
CDC42BPA-212ENST00000478573 XAGE3Q8WTP9 111 aa7.05□□□□□ -1.28
CDC42BPA-212ENST00000478573 MAPK8IP1Q9UQF2 711 aa7.05□□□□□ -1.28
CDC42BPA-212ENST00000478573 KRTAP4-8A0A0G2JLE6 195 aa7.04□□□□□ -1.28
CDC42BPA-212ENST00000478573 FARP2O94887 1054 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-212ENST00000478573 SLITRK5O94991 958 aa7.04□□□□□ -1.28
CDC42BPA-212ENST00000478573 EIF4BP23588 611 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-212ENST00000478573 CDK8P49336 464 aa7.04□□□□□ -1.28
CDC42BPA-212ENST00000478573 PKN1Q16512 942 aa7.04□□□□□ -1.28
CDC42BPA-212ENST00000478573 TTBK2Q6IQ55 1244 aa7.04□□□□□ -1.28
CDC42BPA-212ENST00000478573 ANKRD24Q8TF21 1146 aa7.04□□□□□ -1.28
CDC42BPA-212ENST00000478573 GAL3ST3Q96A11 431 aa7.04□□□□□ -1.28
CDC42BPA-212ENST00000478573 PITPNM2Q9BZ72 1349 aa7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 PRR33A8MZF0 331 aa7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 FGD1P98174 961 aa7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 CCDC85BQ15834 202 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 KCNMB1Q16558 191 aa7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 MAP3K11Q16584 847 aa7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 NKG7Q16617 165 aa7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 SFRP5Q5T4F7 317 aa7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 SND1Q7KZF4 910 aaKnown RBP eCLIP7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 CYFIP1Q7L576 1253 aa7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 ZSWIM9Q86XI8 627 aa7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 KSR1Q8IVT5 923 aa7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 MFSD4AQ8N468 514 aa7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 TMEM40Q8WWA1 233 aa7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 WNT10AQ9GZT5 417 aa7.03□□□□□ -1.28
CDC42BPA-212ENST00000478573 CARS2Q9HA77 564 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms