RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 C16orf45Q96MC5 204 aaPredicted RBP6.98□□□□□ -1.29
SH3D19-207ENST00000478503 LRP2BPQ9P2M1 347 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 ZNF142P52746 1687 aaPredicted RBP6.98□□□□□ -1.29
SH3D19-207ENST00000478503 NEDD4P46934 1319 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 GOLGA6L19H0YKK7 550 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 S100BP04271 92 aaPredicted RBP6.98□□□□□ -1.29
SH3D19-207ENST00000478503 EVX2Q03828 476 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 DDB1Q16531 1140 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 C3orf67Q6ZVT6 689 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 CLIC6Q96NY7 704 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.98□□□□□ -1.29
SH3D19-207ENST00000478503 GPR108Q9NPR9 543 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 CTNNA3Q9UI47 895 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 NUB1Q9Y5A7 615 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 ADD2P35612 726 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 TDO2P48775 406 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 ITPK1Q13572 414 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 E2F5Q15329 346 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 HS1BP3Q53T59 392 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 LMBRD2Q68DH5 695 aaPredicted RBP6.98□□□□□ -1.29
SH3D19-207ENST00000478503 SYNE3Q6ZMZ3 975 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 MB21D2Q8IYB1 491 aaPredicted RBP6.98□□□□□ -1.29
SH3D19-207ENST00000478503 RNF217Q8TC41 542 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 JDP2Q8WYK2 163 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 NAPBQ9H115 298 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 ZSWIM4Q9H7M6 989 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 DDX19AQ9NUU7 478 aaKnown RBP6.98□□□□□ -1.29
SH3D19-207ENST00000478503 KCNJ14Q9UNX9 436 aa6.98□□□□□ -1.29
SH3D19-207ENST00000478503 IFIT3O14879 490 aaKnown RBP6.97□□□□□ -1.29
SH3D19-207ENST00000478503 PDE8AO60658 829 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 METAP2P50579 478 aaKnown RBP eCLIP6.97□□□□□ -1.29
SH3D19-207ENST00000478503 APLP1P51693 650 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 UVSSAQ2YD98 709 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 CCDC144BQ3MJ40 725 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 TMEM67Q5HYA8 995 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 AOPEPQ8N6M6 819 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 SPATA5Q8NB90 893 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 ALG1Q9BT22 464 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 SLC26A6Q9BXS9 759 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 ZSCAN16Q9H4T2 348 aaPredicted RBP6.97□□□□□ -1.29
SH3D19-207ENST00000478503 TRMT1Q9NXH9 659 aaKnown RBP6.97□□□□□ -1.29
SH3D19-207ENST00000478503 MKRN1Q9UHC7 482 aaKnown RBP6.97□□□□□ -1.29
SH3D19-207ENST00000478503 TACC3Q9Y6A5 838 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 AFDNP55196 1824 aaKnown RBP6.97□□□□□ -1.29
SH3D19-207ENST00000478503 SMAPO00193 183 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 ZNF16P17020 682 aaPredicted RBP6.97□□□□□ -1.29
SH3D19-207ENST00000478503 GUCY1A2P33402 732 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 TTLL12Q14166 644 aaPredicted RBP6.97□□□□□ -1.29
SH3D19-207ENST00000478503 FMNL3Q8IVF7 1028 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 LCORLQ8N3X6 602 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 TEX13AQ9BXU3 409 aaPredicted RBP6.97□□□□□ -1.29
SH3D19-207ENST00000478503 RAI14Q9P0K7 980 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 CLIP2Q9UDT6 1046 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 COL18A1P39060 1754 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 GOLGA6L6A8MZA4 724 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 TNNT3P45378 269 aaPredicted RBP6.97□□□□□ -1.29
SH3D19-207ENST00000478503 ZRSR1Q15695 479 aaKnown RBP6.97□□□□□ -1.29
SH3D19-207ENST00000478503 FAM98CQ17RN3 349 aaKnown RBP6.97□□□□□ -1.29
SH3D19-207ENST00000478503 ZSWIM5Q9P217 1185 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 SLC4A4Q9Y6R1 1079 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 BAZ2BQ9UIF8 2168 aaKnown RBP6.97□□□□□ -1.29
SH3D19-207ENST00000478503 KCPQ6ZWJ8 1503 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 ELP1O95163 1332 aa6.97□□□□□ -1.29
SH3D19-207ENST00000478503 SIPA1L3O60292 1781 aaPredicted RBP6.96□□□□□ -1.29
SH3D19-207ENST00000478503 JCADQ9P266 1359 aa6.96□□□□□ -1.29
SH3D19-207ENST00000478503 LOC102724428A0A0B4J2F2 783 aa6.96□□□□□ -1.29
SH3D19-207ENST00000478503 SIK1P57059 783 aa6.96□□□□□ -1.29
SH3D19-207ENST00000478503 SNW1Q13573 536 aaKnown RBP6.96□□□□□ -1.29
SH3D19-207ENST00000478503 PPP4R3BQ5MIZ7 849 aa6.96□□□□□ -1.29
SH3D19-207ENST00000478503 MARCH10Q8NA82 808 aaPredicted RBP6.96□□□□□ -1.29
SH3D19-207ENST00000478503 ALDH8A1Q9H2A2 487 aaPredicted RBP6.96□□□□□ -1.29
SH3D19-207ENST00000478503 EPB41L4AQ9HCS5 686 aaPredicted RBP6.96□□□□□ -1.29
SH3D19-207ENST00000478503 PHRF1Q9P1Y6 1649 aaKnown RBP6.96□□□□□ -1.29
SH3D19-207ENST00000478503 ERCC5P28715 1186 aaPredicted RBP6.96□□□□□ -1.3
SH3D19-207ENST00000478503 CHAF1AQ13111 956 aaPredicted RBP6.96□□□□□ -1.3
SH3D19-207ENST00000478503 BRD3Q15059 726 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 DPCR1Q3MIW9 517 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 FBXO18Q8NFZ0 1043 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 ZNF274Q96GC6 653 aaPredicted RBP6.96□□□□□ -1.3
SH3D19-207ENST00000478503 ZNF396Q96N95 335 aaPredicted RBP6.96□□□□□ -1.3
SH3D19-207ENST00000478503 CXorf56Q9H5V9 222 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 TFCP2L1Q9NZI6 479 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 RCOR1Q9UKL0 485 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 KIF3AQ9Y496 699 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 GOLGA8AA7E2F4 631 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 SPTLC2O15270 562 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 ZFYP08048 801 aaPredicted RBP6.96□□□□□ -1.3
SH3D19-207ENST00000478503 KLRK1P26718 216 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 TRIM28Q13263 835 aaKnown RBP6.96□□□□□ -1.3
SH3D19-207ENST00000478503 PUM3Q15397 648 aaKnown RBP6.96□□□□□ -1.3
SH3D19-207ENST00000478503 LRRFIP1Q32MZ4 808 aaKnown RBP6.96□□□□□ -1.3
SH3D19-207ENST00000478503 NAA16Q6N069 864 aaPredicted RBP6.96□□□□□ -1.3
SH3D19-207ENST00000478503 CCDC70Q6NSX1 233 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 INTS5Q6P9B9 1019 aaKnown RBP6.96□□□□□ -1.3
SH3D19-207ENST00000478503 ADGRA1Q86SQ6 560 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 VPS37DQ86XT2 251 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 VGLL2Q8N8G2 317 aa6.96□□□□□ -1.3
SH3D19-207ENST00000478503 STRBPQ96SI9 672 aaKnown RBP6.96□□□□□ -1.3
SH3D19-207ENST00000478503 UTP14AQ9BVJ6 771 aaKnown RBP6.96□□□□□ -1.3
SH3D19-207ENST00000478503 ANGEL1Q9UNK9 670 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms