RNA–Protein interactions for RNA: ENST00000478452.1

MMS19-215, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, human

TSL 2

Gene MMS19, Length 835 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMS19-215	ENST00000478452	TREML2	Q5T2D2	321 aa		10.8	□□□□□ -0.68
MMS19-215	ENST00000478452	PI16	Q6UXB8	463 aa		10.8	□□□□□ -0.68
MMS19-215	ENST00000478452	ATF7IP	Q6VMQ6	1270 aa		10.8	□□□□□ -0.68
MMS19-215	ENST00000478452	TEX11	Q8IYF3	940 aa		10.8	□□□□□ -0.68
MMS19-215	ENST00000478452	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.8	□□□□□ -0.68
MMS19-215	ENST00000478452	DEFB118	Q96PH6	123 aa		10.8	□□□□□ -0.68
MMS19-215	ENST00000478452	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.8	□□□□□ -0.68
MMS19-215	ENST00000478452	PI4KB	Q9UBF8	816 aa		10.8	□□□□□ -0.68
MMS19-215	ENST00000478452		A0A1B0GUL6	1792 aa		10.8	□□□□□ -0.68
MMS19-215	ENST00000478452	PNMA6E	A0A0J9YXQ4	647 aa		10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	CCER2	I3L3R5	266 aa		10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	BCAR3	O75815	825 aa		10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	FARP2	O94887	1054 aa	Predicted RBP	10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	INHA	P05111	366 aa		10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	TRIM27	P14373	513 aa		10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	NAA16	Q6N069	864 aa	Predicted RBP	10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	CLUAP1	Q96AJ1	413 aa		10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	DHX36	Q9H2U1	1008 aa	Known RBP	10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	AS3MT	Q9HBK9	375 aa		10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	RBM27	Q9P2N5	1060 aa	Known RBP	10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	HERC5	Q9UII4	1024 aa	Known RBP	10.79	□□□□□ -0.68
MMS19-215	ENST00000478452	EVI5	O60447	810 aa		10.78	□□□□□ -0.68
MMS19-215	ENST00000478452	PLCG2	P16885	1265 aa		10.78	□□□□□ -0.68
MMS19-215	ENST00000478452	MCAM	P43121	646 aa		10.78	□□□□□ -0.68
MMS19-215	ENST00000478452	HMGCS2	P54868	508 aa		10.78	□□□□□ -0.68
MMS19-215	ENST00000478452	PPP4C	P60510	307 aa		10.78	□□□□□ -0.68
MMS19-215	ENST00000478452	FAM110C	Q1W6H9	321 aa		10.78	□□□□□ -0.68
MMS19-215	ENST00000478452	TTC39A	Q5SRH9	613 aa		10.78	□□□□□ -0.68
MMS19-215	ENST00000478452	TGFBRAP1	Q8WUH2	860 aa		10.78	□□□□□ -0.68
MMS19-215	ENST00000478452	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.78	□□□□□ -0.68
MMS19-215	ENST00000478452	GPR108	Q9NPR9	543 aa		10.78	□□□□□ -0.68
MMS19-215	ENST00000478452	SNRK	Q9NRH2	765 aa		10.78	□□□□□ -0.68
MMS19-215	ENST00000478452	RFX7	Q2KHR2	1363 aa		10.77	□□□□□ -0.68
MMS19-215	ENST00000478452	KIAA0100	Q14667	2235 aa	Known RBP	10.77	□□□□□ -0.68
MMS19-215	ENST00000478452	SURF6	O75683	361 aa	Known RBP	10.77	□□□□□ -0.69
MMS19-215	ENST00000478452	ATP8B2	P98198	1209 aa		10.77	□□□□□ -0.69
MMS19-215	ENST00000478452	OS9	Q13438	667 aa	Predicted RBP	10.77	□□□□□ -0.69
MMS19-215	ENST00000478452	RRP1B	Q14684	758 aa	Known RBP	10.77	□□□□□ -0.69
MMS19-215	ENST00000478452	SH3D19	Q5HYK7	790 aa		10.77	□□□□□ -0.69
MMS19-215	ENST00000478452	WDR18	Q9BV38	432 aa		10.77	□□□□□ -0.69
MMS19-215	ENST00000478452	TRIM34	Q9BYJ4	488 aa		10.77	□□□□□ -0.69
MMS19-215	ENST00000478452	PAK6	Q9NQU5	681 aa	Predicted RBP	10.77	□□□□□ -0.69
MMS19-215	ENST00000478452	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
MMS19-215	ENST00000478452	TMOD4	Q9NZQ9	345 aa		10.77	□□□□□ -0.69
MMS19-215	ENST00000478452	GJD2	Q9UKL4	321 aa		10.77	□□□□□ -0.69
MMS19-215	ENST00000478452	ARAP2	Q8WZ64	1704 aa		10.77	□□□□□ -0.69
MMS19-215	ENST00000478452	OTOF	Q9HC10	1997 aa		10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	LAMB1	P07942	1786 aa		10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	C19orf81	C9J6K1	198 aa		10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	ZBTB7B	O15156	539 aa	Predicted RBP	10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	IGSF3	O75054	1194 aa		10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	ASNS	P08243	561 aa		10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	BACE1	P56817	501 aa		10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	TNNI3K	Q59H18	835 aa		10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	ZKSCAN2	Q63HK3	967 aa		10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	NECAB2	Q7Z6G3	386 aa		10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	TMEM57	Q8N5G2	664 aa		10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	PAWR	Q96IZ0	340 aa	Known RBP	10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	P2RX7	Q99572	595 aa	Known RBP	10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	CRISPLD2	Q9H0B8	497 aa		10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	HMX1	Q9NP08	348 aa	Predicted RBP	10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	TNN	Q9UQP3	1299 aa		10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	FPGT-TNNI3K	V9GXZ4	949 aa		10.76	□□□□□ -0.69
MMS19-215	ENST00000478452	USP17L10	C9JJH3	530 aa		10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	CYP2E1	P05181	493 aa	Predicted RBP	10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	HOXA7	P31268	230 aa	Predicted RBP	10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	IRX3	P78415	501 aa	Predicted RBP	10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	MTMR2	Q13614	643 aa		10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	POLA2	Q14181	598 aa		10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	METTL16	Q86W50	562 aa	Known RBP	10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	MAPKAPK5	Q8IW41	473 aa		10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	CCAR1	Q8IX12	1150 aa	Known RBP	10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	GPRC5A	Q8NFJ5	357 aa		10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	SSH3	Q8TE77	659 aa		10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	DBNDD2	Q9BQY9	259 aa		10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	GINM1	Q9NU53	330 aa		10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	PALD1	Q9ULE6	856 aa		10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	RPTOR	Q8N122	1335 aa		10.75	□□□□□ -0.69
MMS19-215	ENST00000478452	HMGCR	P04035	888 aa		10.74	□□□□□ -0.69
MMS19-215	ENST00000478452	CYP2B6	P20813	491 aa		10.74	□□□□□ -0.69
MMS19-215	ENST00000478452	JAG1	P78504	1218 aa		10.74	□□□□□ -0.69
MMS19-215	ENST00000478452	ANKLE1	Q8NAG6	615 aa		10.74	□□□□□ -0.69
MMS19-215	ENST00000478452	PRO3102	Q9H379	93 aa		10.74	□□□□□ -0.69
MMS19-215	ENST00000478452	MORF4L1	Q9UBU8	362 aa		10.74	□□□□□ -0.69
MMS19-215	ENST00000478452	STAP2	Q9UGK3	403 aa		10.74	□□□□□ -0.69
MMS19-215	ENST00000478452	HLA-DOA	P06340	250 aa		10.73	□□□□□ -0.69
MMS19-215	ENST00000478452	CYP7A1	P22680	504 aa		10.73	□□□□□ -0.69
MMS19-215	ENST00000478452	ZAP70	P43403	619 aa		10.73	□□□□□ -0.69
MMS19-215	ENST00000478452	HERVK_113	P62684	666 aa		10.73	□□□□□ -0.69
MMS19-215	ENST00000478452	ADGRA1	Q86SQ6	560 aa		10.73	□□□□□ -0.69
MMS19-215	ENST00000478452	NUDT12	Q9BQG2	462 aa		10.73	□□□□□ -0.69
MMS19-215	ENST00000478452	NBPF3	Q9H094	633 aa		10.73	□□□□□ -0.69
MMS19-215	ENST00000478452	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.73	□□□□□ -0.69
MMS19-215	ENST00000478452	RBPJL	Q9UBG7	517 aa		10.73	□□□□□ -0.69
MMS19-215	ENST00000478452	SAP30BP	Q9UHR5	308 aa	Known RBP	10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms