RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 CXCR5P32302 372 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 ATP6V1AP38606 617 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 C2orf54Q08AI8 447 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 KRI1Q8N9T8 703 aaKnown RBP12.9□□□□□ -0.34
GFM1-207ENST00000478254 NCOA7Q8NI08 942 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 PLIN2Q99541 437 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 SLC24A3Q9HC58 644 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 A0A0G2JS52 829 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 EXOC5O00471 708 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 FGAP02671 866 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 FXR1P51114 621 aaKnown RBP eCLIP12.9□□□□□ -0.34
GFM1-207ENST00000478254 RRAGBQ5VZM2 374 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 TMEM139Q8IV31 216 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 OSBP2Q969R2 916 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 HPDP32754 393 aaPredicted RBP12.9□□□□□ -0.34
GFM1-207ENST00000478254 ANKRD18AQ8IVF6 992 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 IFT81Q8WYA0 676 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 ZNF274Q96GC6 653 aaPredicted RBP12.9□□□□□ -0.34
GFM1-207ENST00000478254 SENP2Q9HC62 589 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 BRMS1Q9HCU9 246 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 CABP5Q9NP86 173 aa12.9□□□□□ -0.34
GFM1-207ENST00000478254 MAST3O60307 1309 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 HNRNPH1P31943 449 aaKnown RBP12.89□□□□□ -0.35
GFM1-207ENST00000478254 UBXN1Q04323 297 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 PPARAQ07869 468 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 NR5A1Q13285 461 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 E2F5Q15329 346 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 SH2D3CQ8N5H7 860 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 BPIFA3Q9BQP9 254 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 CAPS2Q9BXY5 557 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 CD248Q9HCU0 757 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 PSD3Q9NYI0 1048 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.89□□□□□ -0.35
GFM1-207ENST00000478254 USP42Q9H9J4 1324 aaKnown RBP12.89□□□□□ -0.35
GFM1-207ENST00000478254 USP8P40818 1118 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 EIF5P55010 431 aaKnown RBP12.89□□□□□ -0.35
GFM1-207ENST00000478254 GCKRQ14397 625 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 PPP2R5AQ15172 486 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 LRRC24Q50LG9 513 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 CCDC181Q5TID7 509 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 KLHL34Q8N239 644 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 MMS19Q96T76 1030 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 CHP1Q99653 195 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 ZBTB3Q9H5J0 574 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 SMARCAL1Q9NZC9 954 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 IGSF1Q8N6C5 1336 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 BACH1O14867 736 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 RNF113AO15541 343 aaKnown RBP12.89□□□□□ -0.35
GFM1-207ENST00000478254 CDR1P51861 262 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 TMEM67Q5HYA8 995 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 FCHSD1Q86WN1 690 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 ZNF526Q8TF50 670 aaPredicted RBP12.89□□□□□ -0.35
GFM1-207ENST00000478254 SUFUQ9UMX1 484 aa12.89□□□□□ -0.35
GFM1-207ENST00000478254 IFIT3O14879 490 aaKnown RBP12.88□□□□□ -0.35
GFM1-207ENST00000478254 RPSAP08865 295 aaKnown RBP12.88□□□□□ -0.35
GFM1-207ENST00000478254 TTC5Q8N0Z6 440 aa12.88□□□□□ -0.35
GFM1-207ENST00000478254 KAT2BQ92831 832 aa12.88□□□□□ -0.35
GFM1-207ENST00000478254 ZBTB43O43298 467 aa12.88□□□□□ -0.35
GFM1-207ENST00000478254 CSB-PGBD3P0DP91 1061 aa12.88□□□□□ -0.35
GFM1-207ENST00000478254 HDGFP51858 240 aaKnown RBP12.88□□□□□ -0.35
GFM1-207ENST00000478254 CYP27A1Q02318 531 aa12.88□□□□□ -0.35
GFM1-207ENST00000478254 PTPN12Q05209 780 aaKnown RBP12.88□□□□□ -0.35
GFM1-207ENST00000478254 ANKRD13CQ8N6S4 541 aa12.88□□□□□ -0.35
GFM1-207ENST00000478254 HAUS7Q99871 368 aa12.88□□□□□ -0.35
GFM1-207ENST00000478254 UBXN6Q9BZV1 441 aa12.88□□□□□ -0.35
GFM1-207ENST00000478254 NEXMIFQ5QGS0 1516 aa12.88□□□□□ -0.35
GFM1-207ENST00000478254 SYNRGQ9UMZ2 1314 aa12.88□□□□□ -0.35
GFM1-207ENST00000478254 NEURL1BA8MQ27 555 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 KCNJ6P48051 423 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 EXOSC10Q01780 885 aaKnown RBP12.87□□□□□ -0.35
GFM1-207ENST00000478254 PTPROQ16827 1216 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 USPL1Q5W0Q7 1092 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 DIS3L2Q8IYB7 885 aaKnown RBP12.87□□□□□ -0.35
GFM1-207ENST00000478254 EPSTI1Q96J88 318 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 KCND1Q9NSA2 647 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 PPLO60437 1756 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 IDEP14735 1019 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 PUS3Q9BZE2 481 aaKnown RBP12.87□□□□□ -0.35
GFM1-207ENST00000478254 MED4Q9NPJ6 270 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 CEP126Q9P2H0 1117 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 ARHGEF10O15013 1369 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 NEBLO76041 1014 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 ATP1A1P05023 1023 aaKnown RBP12.87□□□□□ -0.35
GFM1-207ENST00000478254 SSRP1Q08945 709 aaKnown RBP12.87□□□□□ -0.35
GFM1-207ENST00000478254 NLRP2Q9NX02 1062 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 SLC12A7Q9Y666 1083 aa12.87□□□□□ -0.35
GFM1-207ENST00000478254 SCP2P22307 547 aa12.86□□□□□ -0.35
GFM1-207ENST00000478254 TSGA10IPQ3SY00 556 aa12.86□□□□□ -0.35
GFM1-207ENST00000478254 ODF2Q5BJF6 829 aa12.86□□□□□ -0.35
GFM1-207ENST00000478254 PPANQ9NQ55 473 aaKnown RBP12.86□□□□□ -0.35
GFM1-207ENST00000478254 PCDHB6Q9Y5E3 794 aa12.86□□□□□ -0.35
GFM1-207ENST00000478254 SAR1BQ9Y6B6 198 aa12.86□□□□□ -0.35
GFM1-207ENST00000478254 NF2P35240 595 aa12.86□□□□□ -0.35
GFM1-207ENST00000478254 GUCY2FP51841 1108 aa12.86□□□□□ -0.35
GFM1-207ENST00000478254 RRP36Q96EU6 259 aaKnown RBP12.86□□□□□ -0.35
GFM1-207ENST00000478254 SELENOOQ9BVL4 669 aa12.86□□□□□ -0.35
GFM1-207ENST00000478254 WWC3Q9ULE0 1092 aa12.86□□□□□ -0.35
GFM1-207ENST00000478254 SBNO1A3KN83 1393 aa12.86□□□□□ -0.35
GFM1-207ENST00000478254 MROH1Q8NDA8 1641 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms