RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 PABPC4Q13310 644 aaKnown RBP eCLIP16.11■□□□□ 0.17
PABPC4-212ENST00000477556 NAA16Q6N069 864 aaPredicted RBP16.11■□□□□ 0.17
PABPC4-212ENST00000477556 PROCA1Q8NCQ7 364 aaPredicted RBP16.11■□□□□ 0.17
PABPC4-212ENST00000477556 ZNF280CQ8ND82 737 aa16.11■□□□□ 0.17
PABPC4-212ENST00000477556 SHISA4Q96DD7 197 aa16.11■□□□□ 0.17
PABPC4-212ENST00000477556 HERC5Q9UII4 1024 aaKnown RBP16.11■□□□□ 0.17
PABPC4-212ENST00000477556 PTPRFP10586 1907 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 ADCY3O60266 1144 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 CAP2P40123 477 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 FLT3LGP49771 235 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 SPP2Q13103 211 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 POLA2Q14181 598 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 TNNI3KQ59H18 835 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 FTSJ3Q8IY81 847 aaKnown RBP16.1■□□□□ 0.17
PABPC4-212ENST00000477556 SH3RF3Q8TEJ3 882 aaPredicted RBP16.1■□□□□ 0.17
PABPC4-212ENST00000477556 COA7Q96BR5 231 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 DBNDD2Q9BQY9 259 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 DHX36Q9H2U1 1008 aaKnown RBP16.1■□□□□ 0.17
PABPC4-212ENST00000477556 AS3MTQ9HBK9 375 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 SNRKQ9NRH2 765 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 PI4KBQ9UBF8 816 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 FPGT-TNNI3KV9GXZ4 949 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 MGAMO43451 1857 aa16.1■□□□□ 0.17
PABPC4-212ENST00000477556 USP17L5A8MUK1 530 aa16.09■□□□□ 0.17
PABPC4-212ENST00000477556 SURF6O75683 361 aaKnown RBP16.09■□□□□ 0.17
PABPC4-212ENST00000477556 ATP8B2P98198 1209 aa16.09■□□□□ 0.17
PABPC4-212ENST00000477556 IRF5Q13568 498 aa16.09■□□□□ 0.17
PABPC4-212ENST00000477556 FAM110CQ1W6H9 321 aa16.09■□□□□ 0.17
PABPC4-212ENST00000477556 TREML2Q5T2D2 321 aa16.09■□□□□ 0.17
PABPC4-212ENST00000477556 ANKRD13CQ8N6S4 541 aa16.09■□□□□ 0.17
PABPC4-212ENST00000477556 SSH3Q8TE77 659 aa16.09■□□□□ 0.17
PABPC4-212ENST00000477556 PXYLP1Q8TE99 480 aa16.09■□□□□ 0.17
PABPC4-212ENST00000477556 DPF3Q92784 378 aa16.09■□□□□ 0.17
PABPC4-212ENST00000477556 AATFQ9NY61 560 aaKnown RBP eCLIP16.09■□□□□ 0.17
PABPC4-212ENST00000477556 PHIPQ8WWQ0 1821 aa16.09■□□□□ 0.17
PABPC4-212ENST00000477556 H0YGN5 161 aa16.08■□□□□ 0.16
PABPC4-212ENST00000477556 IGSF3O75054 1194 aa16.08■□□□□ 0.16
PABPC4-212ENST00000477556 GCLCP48506 637 aaPredicted RBP16.08■□□□□ 0.16
PABPC4-212ENST00000477556 HMGCS2P54868 508 aa16.08■□□□□ 0.16
PABPC4-212ENST00000477556 PPP4CP60510 307 aa16.08■□□□□ 0.16
PABPC4-212ENST00000477556 HTATIP2Q9BUP3 242 aa16.08■□□□□ 0.16
PABPC4-212ENST00000477556 TAOK2Q9UL54 1235 aa16.08■□□□□ 0.16
PABPC4-212ENST00000477556 CENPFP49454 3210 aa16.07■□□□□ 0.16
PABPC4-212ENST00000477556 INHAP05111 366 aa16.07■□□□□ 0.16
PABPC4-212ENST00000477556 CYP2E1P05181 493 aaPredicted RBP16.07■□□□□ 0.16
PABPC4-212ENST00000477556 ELNP15502 786 aa16.07■□□□□ 0.16
PABPC4-212ENST00000477556 ITPRIPQ8IWB1 547 aa16.07■□□□□ 0.16
PABPC4-212ENST00000477556 CRACR2BQ8N4Y2 399 aaPredicted RBP16.07■□□□□ 0.16
PABPC4-212ENST00000477556 U2AF1L4Q8WU68 220 aaKnown RBP16.07■□□□□ 0.16
PABPC4-212ENST00000477556 TGFBRAP1Q8WUH2 860 aa16.07■□□□□ 0.16
PABPC4-212ENST00000477556 ZNF512BQ96KM6 892 aaPredicted RBP16.07■□□□□ 0.16
PABPC4-212ENST00000477556 TRIM34Q9BYJ4 488 aa16.07■□□□□ 0.16
PABPC4-212ENST00000477556 UNC93B1Q9H1C4 597 aa16.07■□□□□ 0.16
PABPC4-212ENST00000477556 C1orf115Q9H7X2 142 aa16.07■□□□□ 0.16
PABPC4-212ENST00000477556 COLQQ9Y215 455 aaPredicted RBP16.07■□□□□ 0.16
PABPC4-212ENST00000477556 FARP2O94887 1054 aaPredicted RBP16.06■□□□□ 0.16
PABPC4-212ENST00000477556 SGPL1O95470 568 aa16.06■□□□□ 0.16
PABPC4-212ENST00000477556 ASNSP08243 561 aa16.06■□□□□ 0.16
PABPC4-212ENST00000477556 CAPN2P17655 700 aa16.06■□□□□ 0.16
PABPC4-212ENST00000477556 HNRNPUQ00839 825 aaKnown RBP eCLIP16.06■□□□□ 0.16
PABPC4-212ENST00000477556 RRP1BQ14684 758 aaKnown RBP16.06■□□□□ 0.16
PABPC4-212ENST00000477556 SH3D19Q5HYK7 790 aa16.06■□□□□ 0.16
PABPC4-212ENST00000477556 FOXP4Q8IVH2 680 aaPredicted RBP16.06■□□□□ 0.16
PABPC4-212ENST00000477556 MAPKAPK5Q8IW41 473 aa16.06■□□□□ 0.16
PABPC4-212ENST00000477556 NOP58Q9Y2X3 529 aaKnown RBP16.06■□□□□ 0.16
PABPC4-212ENST00000477556 CEP290O15078 2479 aa16.05■□□□□ 0.16
PABPC4-212ENST00000477556 FLT1P17948 1338 aa16.05■□□□□ 0.16
PABPC4-212ENST00000477556 ZAP70P43403 619 aa16.05■□□□□ 0.16
PABPC4-212ENST00000477556 UBE2Q1Q7Z7E8 422 aa16.05■□□□□ 0.16
PABPC4-212ENST00000477556 WDR18Q9BV38 432 aa16.05■□□□□ 0.16
PABPC4-212ENST00000477556 ASCC2Q9H1I8 757 aaPredicted RBP16.05■□□□□ 0.16
PABPC4-212ENST00000477556 GINM1Q9NU53 330 aa16.05■□□□□ 0.16
PABPC4-212ENST00000477556 TMOD4Q9NZQ9 345 aa16.05■□□□□ 0.16
PABPC4-212ENST00000477556 MAST2Q6P0Q8 1798 aa16.05■□□□□ 0.16
PABPC4-212ENST00000477556 ATAD5Q96QE3 1844 aa16.04■□□□□ 0.16
PABPC4-212ENST00000477556 HLA-DOAP06340 250 aa16.04■□□□□ 0.16
PABPC4-212ENST00000477556 FXR1P51114 621 aaKnown RBP eCLIP16.04■□□□□ 0.16
PABPC4-212ENST00000477556 IRX3P78415 501 aaPredicted RBP16.04■□□□□ 0.16
PABPC4-212ENST00000477556 DBNLQ9UJU6 430 aaKnown RBP16.04■□□□□ 0.16
PABPC4-212ENST00000477556 NR2E3Q9Y5X4 410 aa16.04■□□□□ 0.16
PABPC4-212ENST00000477556 LOC285556D6RIA3 1793 aa16.04■□□□□ 0.16
PABPC4-212ENST00000477556 MKI67P46013 3256 aaKnown RBP16.04■□□□□ 0.16
PABPC4-212ENST00000477556 ZBTB7BO15156 539 aaPredicted RBP16.03■□□□□ 0.16
PABPC4-212ENST00000477556 TFRCP02786 760 aaKnown RBP16.03■□□□□ 0.16
PABPC4-212ENST00000477556 CYP7A1P22680 504 aa16.03■□□□□ 0.16
PABPC4-212ENST00000477556 BACE1P56817 501 aa16.03■□□□□ 0.16
PABPC4-212ENST00000477556 MTMR2Q13614 643 aa16.03■□□□□ 0.16
PABPC4-212ENST00000477556 ADGRA1Q86SQ6 560 aa16.03■□□□□ 0.16
PABPC4-212ENST00000477556 METTL16Q86W50 562 aaKnown RBP16.03■□□□□ 0.16
PABPC4-212ENST00000477556 CERS3Q8IU89 383 aa16.03■□□□□ 0.16
PABPC4-212ENST00000477556 DEFB118Q96PH6 123 aa16.03■□□□□ 0.16
PABPC4-212ENST00000477556 CCDC8Q9H0W5 538 aaPredicted RBP16.03■□□□□ 0.16
PABPC4-212ENST00000477556 PIH1D3Q9NQM4 214 aaKnown RBP16.03■□□□□ 0.16
PABPC4-212ENST00000477556 PALD1Q9ULE6 856 aa16.03■□□□□ 0.16
PABPC4-212ENST00000477556 C19orf81C9J6K1 198 aa16.02■□□□□ 0.16
PABPC4-212ENST00000477556 IDH1O75874 414 aaKnown RBP16.02■□□□□ 0.16
PABPC4-212ENST00000477556 CHRDL2Q6WN34 429 aa16.02■□□□□ 0.16
PABPC4-212ENST00000477556 DNAJC18Q9H819 358 aa16.02■□□□□ 0.16
PABPC4-212ENST00000477556 PAK6Q9NQU5 681 aaPredicted RBP16.02■□□□□ 0.16
PABPC4-212ENST00000477556 SAP30BPQ9UHR5 308 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms