RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 CAP2P40123 477 aa13.95□□□□□ -0.18
HDLBP-236ENST00000477477 ITPRIPQ8IWB1 547 aa13.95□□□□□ -0.18
HDLBP-236ENST00000477477 SMCR8Q8TEV9 937 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-236ENST00000477477 ZNF512BQ96KM6 892 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-236ENST00000477477 NOL10Q9BSC4 688 aaKnown RBP13.95□□□□□ -0.18
HDLBP-236ENST00000477477 AATFQ9NY61 560 aaKnown RBP eCLIP13.95□□□□□ -0.18
HDLBP-236ENST00000477477 NOP58Q9Y2X3 529 aaKnown RBP13.95□□□□□ -0.18
HDLBP-236ENST00000477477 BAG3O95817 575 aa13.94□□□□□ -0.18
HDLBP-236ENST00000477477 CYP2E1P05181 493 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-236ENST00000477477 RLBP1P12271 317 aa13.94□□□□□ -0.18
HDLBP-236ENST00000477477 PLCG2P16885 1265 aa13.94□□□□□ -0.18
HDLBP-236ENST00000477477 SPP2Q13103 211 aa13.94□□□□□ -0.18
HDLBP-236ENST00000477477 RRP1BQ14684 758 aaKnown RBP13.94□□□□□ -0.18
HDLBP-236ENST00000477477 HABP4Q5JVS0 413 aaKnown RBP13.94□□□□□ -0.18
HDLBP-236ENST00000477477 TREML2Q5T2D2 321 aa13.94□□□□□ -0.18
HDLBP-236ENST00000477477 PROCA1Q8NCQ7 364 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-236ENST00000477477 ZNF280CQ8ND82 737 aa13.94□□□□□ -0.18
HDLBP-236ENST00000477477 SLAIN1Q8ND83 568 aa13.94□□□□□ -0.18
HDLBP-236ENST00000477477 TBC1D2Q9BYX2 928 aa13.94□□□□□ -0.18
HDLBP-236ENST00000477477 HERC5Q9UII4 1024 aaKnown RBP13.94□□□□□ -0.18
HDLBP-236ENST00000477477 PNMA3Q9UL41 463 aa13.94□□□□□ -0.18
HDLBP-236ENST00000477477 GABRQQ9UN88 632 aa13.94□□□□□ -0.18
HDLBP-236ENST00000477477 PHIPQ8WWQ0 1821 aa13.94□□□□□ -0.18
HDLBP-236ENST00000477477 PTPRFP10586 1907 aa13.94□□□□□ -0.18
HDLBP-236ENST00000477477 MAST2Q6P0Q8 1798 aa13.94□□□□□ -0.18
HDLBP-236ENST00000477477 USP17L5A8MUK1 530 aa13.93□□□□□ -0.18
HDLBP-236ENST00000477477 ZBTB7BO15156 539 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-236ENST00000477477 IGSF3O75054 1194 aa13.93□□□□□ -0.18
HDLBP-236ENST00000477477 GJB1P08034 283 aa13.93□□□□□ -0.18
HDLBP-236ENST00000477477 CCL5P13501 91 aa13.93□□□□□ -0.18
HDLBP-236ENST00000477477 ZAP70P43403 619 aa13.93□□□□□ -0.18
HDLBP-236ENST00000477477 PPP4CP60510 307 aa13.93□□□□□ -0.18
HDLBP-236ENST00000477477 UBXN2AP68543 259 aa13.93□□□□□ -0.18
HDLBP-236ENST00000477477 ADGRA1Q86SQ6 560 aa13.93□□□□□ -0.18
HDLBP-236ENST00000477477 NKX2-3Q8TAU0 364 aa13.93□□□□□ -0.18
HDLBP-236ENST00000477477 DHX36Q9H2U1 1008 aaKnown RBP13.93□□□□□ -0.18
HDLBP-236ENST00000477477 PI4KBQ9UBF8 816 aa13.93□□□□□ -0.18
HDLBP-236ENST00000477477 BIN2Q9UBW5 565 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-236ENST00000477477 DBNLQ9UJU6 430 aaKnown RBP13.93□□□□□ -0.18
HDLBP-236ENST00000477477 FLT1P17948 1338 aa13.92□□□□□ -0.18
HDLBP-236ENST00000477477 TNPO2O14787 897 aaKnown RBP13.92□□□□□ -0.18
HDLBP-236ENST00000477477 GJA8P48165 433 aa13.92□□□□□ -0.18
HDLBP-236ENST00000477477 FLT3LGP49771 235 aa13.92□□□□□ -0.18
HDLBP-236ENST00000477477 HMGCS2P54868 508 aa13.92□□□□□ -0.18
HDLBP-236ENST00000477477 IRF5Q13568 498 aa13.92□□□□□ -0.18
HDLBP-236ENST00000477477 FAM110CQ1W6H9 321 aa13.92□□□□□ -0.18
HDLBP-236ENST00000477477 MAPKAPK5Q8IW41 473 aa13.92□□□□□ -0.18
HDLBP-236ENST00000477477 MIER1Q8N108 512 aa13.92□□□□□ -0.18
HDLBP-236ENST00000477477 ANKRD13CQ8N6S4 541 aa13.92□□□□□ -0.18
HDLBP-236ENST00000477477 TGFBRAP1Q8WUH2 860 aa13.92□□□□□ -0.18
HDLBP-236ENST00000477477 RNF208Q9H0X6 261 aa13.92□□□□□ -0.18
HDLBP-236ENST00000477477 PIH1D3Q9NQM4 214 aaKnown RBP13.92□□□□□ -0.18
HDLBP-236ENST00000477477 TLR7Q9NYK1 1049 aaKnown RBP13.92□□□□□ -0.18
HDLBP-236ENST00000477477 ADCY3O60266 1144 aa13.91□□□□□ -0.18
HDLBP-236ENST00000477477 SH3D19Q5HYK7 790 aa13.91□□□□□ -0.18
HDLBP-236ENST00000477477 CEP85Q6P2H3 762 aa13.91□□□□□ -0.18
HDLBP-236ENST00000477477 PXYLP1Q8TE99 480 aa13.91□□□□□ -0.18
HDLBP-236ENST00000477477 CCDC8Q9H0W5 538 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-236ENST00000477477 DNAJC18Q9H819 358 aa13.91□□□□□ -0.18
HDLBP-236ENST00000477477 AS3MTQ9HBK9 375 aa13.91□□□□□ -0.18
HDLBP-236ENST00000477477 LOC285556D6RIA3 1793 aa13.91□□□□□ -0.18
HDLBP-236ENST00000477477 GCLCP48506 637 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-236ENST00000477477 PABPC4Q13310 644 aaKnown RBP eCLIP13.9□□□□□ -0.18
HDLBP-236ENST00000477477 UBE2Q1Q7Z7E8 422 aa13.9□□□□□ -0.18
HDLBP-236ENST00000477477 METTL16Q86W50 562 aaKnown RBP13.9□□□□□ -0.18
HDLBP-236ENST00000477477 EAF2Q96CJ1 260 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-236ENST00000477477 WDR18Q9BV38 432 aa13.9□□□□□ -0.18
HDLBP-236ENST00000477477 UNC93B1Q9H1C4 597 aa13.9□□□□□ -0.18
HDLBP-236ENST00000477477 SIPA1L1O43166 1804 aa13.9□□□□□ -0.18
HDLBP-236ENST00000477477 MGAMO43451 1857 aa13.89□□□□□ -0.19
HDLBP-236ENST00000477477 H0YGN5 161 aa13.89□□□□□ -0.19
HDLBP-236ENST00000477477 INHAP05111 366 aa13.89□□□□□ -0.19
HDLBP-236ENST00000477477 ASNSP08243 561 aa13.89□□□□□ -0.19
HDLBP-236ENST00000477477 ELNP15502 786 aa13.89□□□□□ -0.19
HDLBP-236ENST00000477477 CYP7A1P22680 504 aa13.89□□□□□ -0.19
HDLBP-236ENST00000477477 FOXP4Q8IVH2 680 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-236ENST00000477477 U2AF1L4Q8WU68 220 aaKnown RBP13.89□□□□□ -0.19
HDLBP-236ENST00000477477 COA7Q96BR5 231 aa13.89□□□□□ -0.19
HDLBP-236ENST00000477477 TRIM34Q9BYJ4 488 aa13.89□□□□□ -0.19
HDLBP-236ENST00000477477 ASCC2Q9H1I8 757 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-236ENST00000477477 PALD1Q9ULE6 856 aa13.89□□□□□ -0.19
HDLBP-236ENST00000477477 ZBED9Q6R2W3 1325 aa13.89□□□□□ -0.19
HDLBP-236ENST00000477477 IDH1O75874 414 aaKnown RBP13.88□□□□□ -0.19
HDLBP-236ENST00000477477 HLA-DOAP06340 250 aa13.88□□□□□ -0.19
HDLBP-236ENST00000477477 BACE1P56817 501 aa13.88□□□□□ -0.19
HDLBP-236ENST00000477477 DYNLL1P63167 89 aaKnown RBP13.88□□□□□ -0.19
HDLBP-236ENST00000477477 JAG1P78504 1218 aa13.88□□□□□ -0.19
HDLBP-236ENST00000477477 MTMR2Q13614 643 aa13.88□□□□□ -0.19
HDLBP-236ENST00000477477 SHROOM1Q2M3G4 852 aaPredicted RBP13.88□□□□□ -0.19
HDLBP-236ENST00000477477 CRACR2BQ8N4Y2 399 aaPredicted RBP13.88□□□□□ -0.19
HDLBP-236ENST00000477477 GINM1Q9NU53 330 aa13.88□□□□□ -0.19
HDLBP-236ENST00000477477 SAP30BPQ9UHR5 308 aaKnown RBP13.88□□□□□ -0.19
HDLBP-236ENST00000477477 EXOC6BQ9Y2D4 811 aa13.88□□□□□ -0.19
HDLBP-236ENST00000477477 ATAD5Q96QE3 1844 aa13.87□□□□□ -0.19
HDLBP-236ENST00000477477 FARP2O94887 1054 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-236ENST00000477477 GDF11O95390 407 aa13.87□□□□□ -0.19
HDLBP-236ENST00000477477 SGPL1O95470 568 aa13.87□□□□□ -0.19
HDLBP-236ENST00000477477 IRX3P78415 501 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-236ENST00000477477 CERS3Q8IU89 383 aa13.87□□□□□ -0.19
HDLBP-236ENST00000477477 ERC1Q8IUD2 1116 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms