RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.61□□□□□ -1.19
UBR3-209ENST00000477461 FAM214BQ7L5A3 538 aa7.61□□□□□ -1.19
UBR3-209ENST00000477461 RC3H2Q9HBD1 1191 aaKnown RBP7.61□□□□□ -1.19
UBR3-209ENST00000477461 PRDM7Q9NQW5 492 aa7.61□□□□□ -1.19
UBR3-209ENST00000477461 MBNL3Q9NUK0 354 aaKnown RBP7.61□□□□□ -1.19
UBR3-209ENST00000477461 FAM8A1Q9UBU6 413 aa7.61□□□□□ -1.19
UBR3-209ENST00000477461 ADAMTS6Q9UKP5 1117 aa7.61□□□□□ -1.19
UBR3-209ENST00000477461 CYP8B1Q9UNU6 501 aa7.61□□□□□ -1.19
UBR3-209ENST00000477461 TMEM265A0A087WTH1 108 aa7.6□□□□□ -1.19
UBR3-209ENST00000477461 FANCGO15287 622 aa7.6□□□□□ -1.19
UBR3-209ENST00000477461 RNASE1P07998 156 aaKnown RBP7.6□□□□□ -1.19
UBR3-209ENST00000477461 FUT4P22083 530 aa7.6□□□□□ -1.19
UBR3-209ENST00000477461 LRFN4Q6PJG9 635 aa7.6□□□□□ -1.19
UBR3-209ENST00000477461 PAPLNO95428 1278 aa7.59□□□□□ -1.19
UBR3-209ENST00000477461 YBX3P16989 372 aaKnown RBP eCLIP7.59□□□□□ -1.19
UBR3-209ENST00000477461 JUNBP17275 347 aaPredicted RBP7.59□□□□□ -1.19
UBR3-209ENST00000477461 MAP3K11Q16584 847 aa7.59□□□□□ -1.19
UBR3-209ENST00000477461 PLPPR2Q96GM1 343 aa7.59□□□□□ -1.19
UBR3-209ENST00000477461 GTF2IRD1Q9UHL9 959 aa7.59□□□□□ -1.19
UBR3-209ENST00000477461 EOMESO95936 686 aa7.58□□□□□ -1.2
UBR3-209ENST00000477461 EIF4BP23588 611 aaKnown RBP7.58□□□□□ -1.2
UBR3-209ENST00000477461 TTBK2Q6IQ55 1244 aa7.58□□□□□ -1.2
UBR3-209ENST00000477461 ARMCX6Q7L4S7 300 aa7.58□□□□□ -1.2
UBR3-209ENST00000477461 ZNF507Q8TCN5 953 aa7.58□□□□□ -1.2
UBR3-209ENST00000477461 TRAIPQ9BWF2 469 aa7.58□□□□□ -1.2
UBR3-209ENST00000477461 FBRSQ9HAH7 460 aa7.58□□□□□ -1.2
UBR3-209ENST00000477461 MKNK2Q9HBH9 465 aa7.58□□□□□ -1.2
UBR3-209ENST00000477461 CNTNAP4Q9C0A0 1308 aa7.57□□□□□ -1.2
UBR3-209ENST00000477461 NKPD1Q17RQ9 610 aa7.57□□□□□ -1.2
UBR3-209ENST00000477461 HDXQ7Z353 690 aa7.57□□□□□ -1.2
UBR3-209ENST00000477461 AEBP1Q8IUX7 1158 aa7.57□□□□□ -1.2
UBR3-209ENST00000477461 LRRN4CLQ8ND94 238 aa7.57□□□□□ -1.2
UBR3-209ENST00000477461 KRTAP9-9Q9BYP9 154 aa7.57□□□□□ -1.2
UBR3-209ENST00000477461 KRTAP9-4Q9BYQ2 154 aa7.57□□□□□ -1.2
UBR3-209ENST00000477461 PCDHB5Q9Y5E4 795 aa7.57□□□□□ -1.2
UBR3-209ENST00000477461 BIN1O00499 593 aa7.56□□□□□ -1.2
UBR3-209ENST00000477461 ETF1P62495 437 aaKnown RBP7.56□□□□□ -1.2
UBR3-209ENST00000477461 IKZF1Q13422 519 aa7.56□□□□□ -1.2
UBR3-209ENST00000477461 CCDC85BQ15834 202 aaPredicted RBP7.56□□□□□ -1.2
UBR3-209ENST00000477461 NKG7Q16617 165 aa7.56□□□□□ -1.2
UBR3-209ENST00000477461 WIPI1Q5MNZ9 446 aaPredicted RBP7.56□□□□□ -1.2
UBR3-209ENST00000477461 ANGEL2Q5VTE6 544 aaKnown RBP7.56□□□□□ -1.2
UBR3-209ENST00000477461 SV2BQ7L1I2 683 aa7.56□□□□□ -1.2
UBR3-209ENST00000477461 SPACA3Q8IXA5 215 aa7.56□□□□□ -1.2
UBR3-209ENST00000477461 XAGE3Q8WTP9 111 aa7.56□□□□□ -1.2
UBR3-209ENST00000477461 DUSP9Q99956 384 aaKnown RBP7.56□□□□□ -1.2
UBR3-209ENST00000477461 TPX2Q9ULW0 747 aaKnown RBP7.56□□□□□ -1.2
UBR3-209ENST00000477461 CARMIL2Q6F5E8 1435 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 ANKRD33BA6NCL7 494 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 BTBD11A6QL63 1104 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 GNAT3A8MTJ3 354 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 PRR33A8MZF0 331 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 SLITRK5O94991 958 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 GNA15P30679 374 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 SEPT6Q14141 434 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 CYFIP1Q7L576 1253 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 KCT2Q8NC54 265 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 RIN3Q8TB24 985 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 ANKRD24Q8TF21 1146 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 MIPEPQ99797 713 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 TNKS2Q9H2K2 1166 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 SNX11Q9Y5W9 270 aa7.55□□□□□ -1.2
UBR3-209ENST00000477461 IGF2BP3O00425 579 aaKnown RBP eCLIP7.54□□□□□ -1.2
UBR3-209ENST00000477461 PRPF40AO75400 957 aaKnown RBP7.54□□□□□ -1.2
UBR3-209ENST00000477461 LRIG2O94898 1065 aa7.54□□□□□ -1.2
UBR3-209ENST00000477461 LMNB1P20700 586 aa7.54□□□□□ -1.2
UBR3-209ENST00000477461 SLBPQ14493 270 aaKnown RBP eCLIP7.54□□□□□ -1.2
UBR3-209ENST00000477461 ZNF648Q5T619 568 aaPredicted RBP7.54□□□□□ -1.2
UBR3-209ENST00000477461 CDKAL1Q5VV42 579 aa7.54□□□□□ -1.2
UBR3-209ENST00000477461 GAL3ST3Q96A11 431 aa7.54□□□□□ -1.2
UBR3-209ENST00000477461 WNT10AQ9GZT5 417 aa7.54□□□□□ -1.2
UBR3-209ENST00000477461 PRDM5Q9NQX1 630 aaPredicted RBP7.54□□□□□ -1.2
UBR3-209ENST00000477461 AK5Q9Y6K8 562 aa7.54□□□□□ -1.2
UBR3-209ENST00000477461 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.54□□□□□ -1.2
UBR3-209ENST00000477461 GRK4P32298 578 aa7.53□□□□□ -1.2
UBR3-209ENST00000477461 ZP2Q05996 745 aa7.53□□□□□ -1.2
UBR3-209ENST00000477461 EAPPQ56P03 285 aaPredicted RBP7.53□□□□□ -1.2
UBR3-209ENST00000477461 ATG4DQ86TL0 474 aaPredicted RBP7.53□□□□□ -1.2
UBR3-209ENST00000477461 ASB11Q8WXH4 323 aa7.53□□□□□ -1.2
UBR3-209ENST00000477461 FAM168AQ92567 244 aa7.53□□□□□ -1.2
UBR3-209ENST00000477461 FRMD6Q96NE9 622 aa7.53□□□□□ -1.2
UBR3-209ENST00000477461 FOXQ1Q9C009 403 aa7.53□□□□□ -1.2
UBR3-209ENST00000477461 FAM155AB1AL88 458 aaPredicted RBP7.52□□□□□ -1.21
UBR3-209ENST00000477461 C8AP07357 584 aa7.52□□□□□ -1.21
UBR3-209ENST00000477461 FGD1P98174 961 aa7.52□□□□□ -1.21
UBR3-209ENST00000477461 MEI1Q5TIA1 1274 aa7.52□□□□□ -1.21
UBR3-209ENST00000477461 SCARA3Q6AZY7 606 aa7.52□□□□□ -1.21
UBR3-209ENST00000477461 SLC23A3Q6PIS1 610 aa7.52□□□□□ -1.21
UBR3-209ENST00000477461 JARID2Q92833 1246 aaPredicted RBP7.52□□□□□ -1.21
UBR3-209ENST00000477461 HSPA12BQ96MM6 686 aa7.52□□□□□ -1.21
UBR3-209ENST00000477461 SNCAIPQ9Y6H5 919 aa7.52□□□□□ -1.21
UBR3-209ENST00000477461 CBX7O95931 251 aa7.51□□□□□ -1.21
UBR3-209ENST00000477461 HID1Q8IV36 788 aa7.51□□□□□ -1.21
UBR3-209ENST00000477461 POU5F2Q8N7G0 328 aa7.51□□□□□ -1.21
UBR3-209ENST00000477461 FZD5Q13467 585 aa7.5□□□□□ -1.21
UBR3-209ENST00000477461 ZNF124Q15973 351 aa7.5□□□□□ -1.21
UBR3-209ENST00000477461 SFRP5Q5T4F7 317 aa7.5□□□□□ -1.21
UBR3-209ENST00000477461 PRAMEF13Q5VWM6 474 aa7.5□□□□□ -1.21
UBR3-209ENST00000477461 CDH24Q86UP0 819 aa7.5□□□□□ -1.21
UBR3-209ENST00000477461 FAM161BQ96MY7 647 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms