RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 TMED8Q6PL24 325 aaPredicted RBP18.93■□□□□ 0.62
COMMD6-209ENST00000477377 DNAJC2Q99543 621 aaKnown RBP18.93■□□□□ 0.62
COMMD6-209ENST00000477377 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.93■□□□□ 0.62
COMMD6-209ENST00000477377 PALD1Q9ULE6 856 aa18.93■□□□□ 0.62
COMMD6-209ENST00000477377 JAG1P78504 1218 aa18.92■□□□□ 0.62
COMMD6-209ENST00000477377 GPAT2Q6NUI2 795 aa18.92■□□□□ 0.62
COMMD6-209ENST00000477377 CCDC84Q86UT8 332 aaPredicted RBP18.92■□□□□ 0.62
COMMD6-209ENST00000477377 NOL10Q9BSC4 688 aaKnown RBP18.92■□□□□ 0.62
COMMD6-209ENST00000477377 DHX36Q9H2U1 1008 aaKnown RBP18.92■□□□□ 0.62
COMMD6-209ENST00000477377 PAG1Q9NWQ8 432 aa18.92■□□□□ 0.62
COMMD6-209ENST00000477377 PI4KBQ9UBF8 816 aa18.92■□□□□ 0.62
COMMD6-209ENST00000477377 CXCL11O14625 94 aa18.91■□□□□ 0.62
COMMD6-209ENST00000477377 SLC9C2Q5TAH2 1124 aa18.91■□□□□ 0.62
COMMD6-209ENST00000477377 ZCCHC17Q9NP64 241 aaKnown RBP18.91■□□□□ 0.62
COMMD6-209ENST00000477377 ZHX2Q9Y6X8 837 aa18.91■□□□□ 0.62
COMMD6-209ENST00000477377 ZNF532Q9HCE3 1301 aa18.91■□□□□ 0.62
COMMD6-209ENST00000477377 DOCK1Q14185 1865 aa18.9■□□□□ 0.62
COMMD6-209ENST00000477377 HTTP42858 3142 aa18.9■□□□□ 0.62
COMMD6-209ENST00000477377 A0A0G2JLL6 359 aaPredicted RBP18.9■□□□□ 0.62
COMMD6-209ENST00000477377 CAP2P40123 477 aa18.9■□□□□ 0.62
COMMD6-209ENST00000477377 TAF1CQ15572 869 aaPredicted RBP18.9■□□□□ 0.62
COMMD6-209ENST00000477377 PRRT2Q7Z6L0 340 aaPredicted RBP18.9■□□□□ 0.62
COMMD6-209ENST00000477377 ANKRD23Q86SG2 305 aa18.9■□□□□ 0.62
COMMD6-209ENST00000477377 FOXP4Q8IVH2 680 aaPredicted RBP18.9■□□□□ 0.62
COMMD6-209ENST00000477377 SAP30BPQ9UHR5 308 aaKnown RBP18.9■□□□□ 0.62
COMMD6-209ENST00000477377 HERC5Q9UII4 1024 aaKnown RBP18.9■□□□□ 0.62
COMMD6-209ENST00000477377 ADD2P35612 726 aa18.89■□□□□ 0.61
COMMD6-209ENST00000477377 SHROOM1Q2M3G4 852 aaPredicted RBP18.89■□□□□ 0.61
COMMD6-209ENST00000477377 ECHDC1Q9NTX5 307 aa18.89■□□□□ 0.61
COMMD6-209ENST00000477377 ADGRA2Q96PE1 1338 aa18.89■□□□□ 0.61
COMMD6-209ENST00000477377 TLR2O60603 784 aa18.88■□□□□ 0.61
COMMD6-209ENST00000477377 EVX2Q03828 476 aa18.88■□□□□ 0.61
COMMD6-209ENST00000477377 TSHZ3Q63HK5 1081 aa18.88■□□□□ 0.61
COMMD6-209ENST00000477377 OTUD7AQ8TE49 926 aaPredicted RBP18.88■□□□□ 0.61
COMMD6-209ENST00000477377 ZFYVE28Q9HCC9 887 aa18.88■□□□□ 0.61
COMMD6-209ENST00000477377 PICK1Q9NRD5 415 aa18.88■□□□□ 0.61
COMMD6-209ENST00000477377 PTPRFP10586 1907 aa18.88■□□□□ 0.61
COMMD6-209ENST00000477377 MAGEB6P1A0A0J9YX57 407 aa18.87■□□□□ 0.61
COMMD6-209ENST00000477377 PDHXO00330 501 aa18.87■□□□□ 0.61
COMMD6-209ENST00000477377 SP3Q02447 781 aa18.87■□□□□ 0.61
COMMD6-209ENST00000477377 C17orf99Q6UX52 265 aa18.87■□□□□ 0.61
COMMD6-209ENST00000477377 CERS3Q8IU89 383 aa18.87■□□□□ 0.61
COMMD6-209ENST00000477377 LCORLQ8N3X6 602 aa18.87■□□□□ 0.61
COMMD6-209ENST00000477377 CD99L2Q8TCZ2 262 aa18.87■□□□□ 0.61
COMMD6-209ENST00000477377 DDX60LQ5H9U9 1706 aaKnown RBP18.86■□□□□ 0.61
COMMD6-209ENST00000477377 SALL3Q9BXA9 1300 aa18.86■□□□□ 0.61
COMMD6-209ENST00000477377 CCDC85CA6NKD9 419 aa18.86■□□□□ 0.61
COMMD6-209ENST00000477377 PLCD1P51178 756 aa18.86■□□□□ 0.61
COMMD6-209ENST00000477377 HDAC1Q13547 482 aaPredicted RBP18.86■□□□□ 0.61
COMMD6-209ENST00000477377 PKN2Q16513 984 aaKnown RBP18.86■□□□□ 0.61
COMMD6-209ENST00000477377 SLC4A8Q2Y0W8 1093 aa18.86■□□□□ 0.61
COMMD6-209ENST00000477377 TATDN1Q6P1N9 297 aa18.86■□□□□ 0.61
COMMD6-209ENST00000477377 OTOP1Q7RTM1 612 aa18.86■□□□□ 0.61
COMMD6-209ENST00000477377 HPS5Q9UPZ3 1129 aa18.86■□□□□ 0.61
COMMD6-209ENST00000477377 MYH1P12882 1939 aa18.86■□□□□ 0.61
COMMD6-209ENST00000477377 CTGFP29279 349 aa18.85■□□□□ 0.61
COMMD6-209ENST00000477377 USP5P45974 858 aa18.85■□□□□ 0.61
COMMD6-209ENST00000477377 UBE3CQ15386 1083 aa18.85■□□□□ 0.61
COMMD6-209ENST00000477377 PI4K2BQ8TCG2 481 aa18.85■□□□□ 0.61
COMMD6-209ENST00000477377 ATAD5Q96QE3 1844 aa18.85■□□□□ 0.61
COMMD6-209ENST00000477377 TRIM75PA6NK02 468 aa18.84■□□□□ 0.61
COMMD6-209ENST00000477377 PRKAB2O43741 272 aa18.84■□□□□ 0.61
COMMD6-209ENST00000477377 GABPAQ06546 454 aa18.84■□□□□ 0.61
COMMD6-209ENST00000477377 SPP2Q13103 211 aa18.84■□□□□ 0.61
COMMD6-209ENST00000477377 FBXO46Q6PJ61 603 aaPredicted RBP18.84■□□□□ 0.61
COMMD6-209ENST00000477377 SDR42E1Q8WUS8 393 aa18.84■□□□□ 0.61
COMMD6-209ENST00000477377 ERO1AQ96HE7 468 aa18.84■□□□□ 0.61
COMMD6-209ENST00000477377 EHD4Q9H223 541 aa18.84■□□□□ 0.61
COMMD6-209ENST00000477377 ARMT1Q9H993 441 aa18.84■□□□□ 0.61
COMMD6-209ENST00000477377 DCP1AQ9NPI6 582 aaPredicted RBP18.84■□□□□ 0.61
COMMD6-209ENST00000477377 TRIM17Q9Y577 477 aa18.84■□□□□ 0.61
COMMD6-209ENST00000477377 CENPFP49454 3210 aa18.83■□□□□ 0.61
COMMD6-209ENST00000477377 CYP2C8P10632 490 aa18.83■□□□□ 0.6
COMMD6-209ENST00000477377 ZNF280CQ8ND82 737 aa18.83■□□□□ 0.6
COMMD6-209ENST00000477377 WDR18Q9BV38 432 aa18.83■□□□□ 0.6
COMMD6-209ENST00000477377 ARHGAP39Q9C0H5 1083 aa18.83■□□□□ 0.6
COMMD6-209ENST00000477377 PUS7LQ9H0K6 701 aaKnown RBP18.83■□□□□ 0.6
COMMD6-209ENST00000477377 ZSWIM8A7E2V4 1837 aa18.82■□□□□ 0.6
COMMD6-209ENST00000477377 USP17L5A8MUK1 530 aa18.82■□□□□ 0.6
COMMD6-209ENST00000477377 SMIM22K7EJ46 135 aa18.82■□□□□ 0.6
COMMD6-209ENST00000477377 GDF11O95390 407 aa18.82■□□□□ 0.6
COMMD6-209ENST00000477377 HLA-DOAP06340 250 aa18.82■□□□□ 0.6
COMMD6-209ENST00000477377 RGS19P49795 217 aa18.82■□□□□ 0.6
COMMD6-209ENST00000477377 SH3D19Q5HYK7 790 aa18.82■□□□□ 0.6
COMMD6-209ENST00000477377 TREML2Q5T2D2 321 aa18.82■□□□□ 0.6
COMMD6-209ENST00000477377 FASTKD5Q7L8L6 764 aaKnown RBP18.82■□□□□ 0.6
COMMD6-209ENST00000477377 EXOC6Q8TAG9 804 aa18.82■□□□□ 0.6
COMMD6-209ENST00000477377 CPA4Q9UI42 421 aa18.82■□□□□ 0.6
COMMD6-209ENST00000477377 SERPINB13Q9UIV8 391 aa18.82■□□□□ 0.6
COMMD6-209ENST00000477377 PTPN22Q9Y2R2 807 aa18.82■□□□□ 0.6
COMMD6-209ENST00000477377 SLC45A1Q9Y2W3 748 aa18.82■□□□□ 0.6
COMMD6-209ENST00000477377 TTC41PQ6P2S7 1318 aa18.81■□□□□ 0.6
COMMD6-209ENST00000477377 MBD4O95243 580 aa18.81■□□□□ 0.6
COMMD6-209ENST00000477377 CYP2D6P10635 497 aa18.81■□□□□ 0.6
COMMD6-209ENST00000477377 BCRP11274 1271 aa18.81■□□□□ 0.6
COMMD6-209ENST00000477377 SHMT1P34896 483 aa18.81■□□□□ 0.6
COMMD6-209ENST00000477377 LACTBP83111 547 aaPredicted RBP18.81■□□□□ 0.6
COMMD6-209ENST00000477377 TTC6Q86TZ1 520 aa18.81■□□□□ 0.6
COMMD6-209ENST00000477377 CRACR2BQ8N4Y2 399 aaPredicted RBP18.81■□□□□ 0.6
COMMD6-209ENST00000477377 KBTBD3Q8NAB2 608 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms