RNA–Protein interactions for RNA: ENST00000476807.5

HDLBP-235, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,070 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-235ENST00000476807 TTC39AQ5SRH9 613 aa13.96□□□□□ -0.17
HDLBP-235ENST00000476807 NAA16Q6N069 864 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-235ENST00000476807 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.17
HDLBP-235ENST00000476807 SH3RF3Q8TEJ3 882 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-235ENST00000476807 SHISA4Q96DD7 197 aa13.96□□□□□ -0.17
HDLBP-235ENST00000476807 C1orf115Q9H7X2 142 aa13.96□□□□□ -0.17
HDLBP-235ENST00000476807 SNRKQ9NRH2 765 aa13.96□□□□□ -0.17
HDLBP-235ENST00000476807 PCDH10Q9P2E7 1040 aa13.96□□□□□ -0.17
HDLBP-235ENST00000476807 AGTPBP1Q9UPW5 1226 aa13.96□□□□□ -0.17
HDLBP-235ENST00000476807 SURF6O75683 361 aaKnown RBP13.95□□□□□ -0.18
HDLBP-235ENST00000476807 CAP2P40123 477 aa13.95□□□□□ -0.18
HDLBP-235ENST00000476807 ITPRIPQ8IWB1 547 aa13.95□□□□□ -0.18
HDLBP-235ENST00000476807 SMCR8Q8TEV9 937 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-235ENST00000476807 ZNF512BQ96KM6 892 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-235ENST00000476807 NOL10Q9BSC4 688 aaKnown RBP13.95□□□□□ -0.18
HDLBP-235ENST00000476807 AATFQ9NY61 560 aaKnown RBP eCLIP13.95□□□□□ -0.18
HDLBP-235ENST00000476807 NOP58Q9Y2X3 529 aaKnown RBP13.95□□□□□ -0.18
HDLBP-235ENST00000476807 BAG3O95817 575 aa13.94□□□□□ -0.18
HDLBP-235ENST00000476807 CYP2E1P05181 493 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-235ENST00000476807 RLBP1P12271 317 aa13.94□□□□□ -0.18
HDLBP-235ENST00000476807 PLCG2P16885 1265 aa13.94□□□□□ -0.18
HDLBP-235ENST00000476807 SPP2Q13103 211 aa13.94□□□□□ -0.18
HDLBP-235ENST00000476807 RRP1BQ14684 758 aaKnown RBP13.94□□□□□ -0.18
HDLBP-235ENST00000476807 HABP4Q5JVS0 413 aaKnown RBP13.94□□□□□ -0.18
HDLBP-235ENST00000476807 TREML2Q5T2D2 321 aa13.94□□□□□ -0.18
HDLBP-235ENST00000476807 PROCA1Q8NCQ7 364 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-235ENST00000476807 ZNF280CQ8ND82 737 aa13.94□□□□□ -0.18
HDLBP-235ENST00000476807 SLAIN1Q8ND83 568 aa13.94□□□□□ -0.18
HDLBP-235ENST00000476807 TBC1D2Q9BYX2 928 aa13.94□□□□□ -0.18
HDLBP-235ENST00000476807 HERC5Q9UII4 1024 aaKnown RBP13.94□□□□□ -0.18
HDLBP-235ENST00000476807 PNMA3Q9UL41 463 aa13.94□□□□□ -0.18
HDLBP-235ENST00000476807 GABRQQ9UN88 632 aa13.94□□□□□ -0.18
HDLBP-235ENST00000476807 PHIPQ8WWQ0 1821 aa13.94□□□□□ -0.18
HDLBP-235ENST00000476807 PTPRFP10586 1907 aa13.94□□□□□ -0.18
HDLBP-235ENST00000476807 MAST2Q6P0Q8 1798 aa13.94□□□□□ -0.18
HDLBP-235ENST00000476807 USP17L5A8MUK1 530 aa13.93□□□□□ -0.18
HDLBP-235ENST00000476807 ZBTB7BO15156 539 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-235ENST00000476807 IGSF3O75054 1194 aa13.93□□□□□ -0.18
HDLBP-235ENST00000476807 GJB1P08034 283 aa13.93□□□□□ -0.18
HDLBP-235ENST00000476807 CCL5P13501 91 aa13.93□□□□□ -0.18
HDLBP-235ENST00000476807 ZAP70P43403 619 aa13.93□□□□□ -0.18
HDLBP-235ENST00000476807 PPP4CP60510 307 aa13.93□□□□□ -0.18
HDLBP-235ENST00000476807 UBXN2AP68543 259 aa13.93□□□□□ -0.18
HDLBP-235ENST00000476807 ADGRA1Q86SQ6 560 aa13.93□□□□□ -0.18
HDLBP-235ENST00000476807 NKX2-3Q8TAU0 364 aa13.93□□□□□ -0.18
HDLBP-235ENST00000476807 DHX36Q9H2U1 1008 aaKnown RBP13.93□□□□□ -0.18
HDLBP-235ENST00000476807 PI4KBQ9UBF8 816 aa13.93□□□□□ -0.18
HDLBP-235ENST00000476807 BIN2Q9UBW5 565 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-235ENST00000476807 DBNLQ9UJU6 430 aaKnown RBP13.93□□□□□ -0.18
HDLBP-235ENST00000476807 FLT1P17948 1338 aa13.92□□□□□ -0.18
HDLBP-235ENST00000476807 TNPO2O14787 897 aaKnown RBP13.92□□□□□ -0.18
HDLBP-235ENST00000476807 GJA8P48165 433 aa13.92□□□□□ -0.18
HDLBP-235ENST00000476807 FLT3LGP49771 235 aa13.92□□□□□ -0.18
HDLBP-235ENST00000476807 HMGCS2P54868 508 aa13.92□□□□□ -0.18
HDLBP-235ENST00000476807 IRF5Q13568 498 aa13.92□□□□□ -0.18
HDLBP-235ENST00000476807 FAM110CQ1W6H9 321 aa13.92□□□□□ -0.18
HDLBP-235ENST00000476807 MAPKAPK5Q8IW41 473 aa13.92□□□□□ -0.18
HDLBP-235ENST00000476807 MIER1Q8N108 512 aa13.92□□□□□ -0.18
HDLBP-235ENST00000476807 ANKRD13CQ8N6S4 541 aa13.92□□□□□ -0.18
HDLBP-235ENST00000476807 TGFBRAP1Q8WUH2 860 aa13.92□□□□□ -0.18
HDLBP-235ENST00000476807 RNF208Q9H0X6 261 aa13.92□□□□□ -0.18
HDLBP-235ENST00000476807 PIH1D3Q9NQM4 214 aaKnown RBP13.92□□□□□ -0.18
HDLBP-235ENST00000476807 TLR7Q9NYK1 1049 aaKnown RBP13.92□□□□□ -0.18
HDLBP-235ENST00000476807 ADCY3O60266 1144 aa13.91□□□□□ -0.18
HDLBP-235ENST00000476807 SH3D19Q5HYK7 790 aa13.91□□□□□ -0.18
HDLBP-235ENST00000476807 CEP85Q6P2H3 762 aa13.91□□□□□ -0.18
HDLBP-235ENST00000476807 PXYLP1Q8TE99 480 aa13.91□□□□□ -0.18
HDLBP-235ENST00000476807 CCDC8Q9H0W5 538 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-235ENST00000476807 DNAJC18Q9H819 358 aa13.91□□□□□ -0.18
HDLBP-235ENST00000476807 AS3MTQ9HBK9 375 aa13.91□□□□□ -0.18
HDLBP-235ENST00000476807 U3KPZ7 1027 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-235ENST00000476807 LOC285556D6RIA3 1793 aa13.91□□□□□ -0.18
HDLBP-235ENST00000476807 GCLCP48506 637 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-235ENST00000476807 PABPC4Q13310 644 aaKnown RBP eCLIP13.9□□□□□ -0.18
HDLBP-235ENST00000476807 UBE2Q1Q7Z7E8 422 aa13.9□□□□□ -0.18
HDLBP-235ENST00000476807 METTL16Q86W50 562 aaKnown RBP13.9□□□□□ -0.18
HDLBP-235ENST00000476807 EAF2Q96CJ1 260 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-235ENST00000476807 WDR18Q9BV38 432 aa13.9□□□□□ -0.18
HDLBP-235ENST00000476807 UNC93B1Q9H1C4 597 aa13.9□□□□□ -0.18
HDLBP-235ENST00000476807 SIPA1L1O43166 1804 aa13.9□□□□□ -0.18
HDLBP-235ENST00000476807 MGAMO43451 1857 aa13.89□□□□□ -0.19
HDLBP-235ENST00000476807 H0YGN5 161 aa13.89□□□□□ -0.19
HDLBP-235ENST00000476807 INHAP05111 366 aa13.89□□□□□ -0.19
HDLBP-235ENST00000476807 ASNSP08243 561 aa13.89□□□□□ -0.19
HDLBP-235ENST00000476807 ELNP15502 786 aa13.89□□□□□ -0.19
HDLBP-235ENST00000476807 CYP7A1P22680 504 aa13.89□□□□□ -0.19
HDLBP-235ENST00000476807 FOXP4Q8IVH2 680 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-235ENST00000476807 U2AF1L4Q8WU68 220 aaKnown RBP13.89□□□□□ -0.19
HDLBP-235ENST00000476807 COA7Q96BR5 231 aa13.89□□□□□ -0.19
HDLBP-235ENST00000476807 TRIM34Q9BYJ4 488 aa13.89□□□□□ -0.19
HDLBP-235ENST00000476807 ASCC2Q9H1I8 757 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-235ENST00000476807 PALD1Q9ULE6 856 aa13.89□□□□□ -0.19
HDLBP-235ENST00000476807 ZBED9Q6R2W3 1325 aa13.89□□□□□ -0.19
HDLBP-235ENST00000476807 IDH1O75874 414 aaKnown RBP13.88□□□□□ -0.19
HDLBP-235ENST00000476807 HLA-DOAP06340 250 aa13.88□□□□□ -0.19
HDLBP-235ENST00000476807 BACE1P56817 501 aa13.88□□□□□ -0.19
HDLBP-235ENST00000476807 DYNLL1P63167 89 aaKnown RBP13.88□□□□□ -0.19
HDLBP-235ENST00000476807 JAG1P78504 1218 aa13.88□□□□□ -0.19
HDLBP-235ENST00000476807 MTMR2Q13614 643 aa13.88□□□□□ -0.19
HDLBP-235ENST00000476807 SHROOM1Q2M3G4 852 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms