RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 DHX36Q9H2U1 1008 aaKnown RBP16.4■□□□□ 0.22
HMGCS2-203ENST00000476640 PCDH10Q9P2E7 1040 aa16.4■□□□□ 0.22
HMGCS2-203ENST00000476640 HERC5Q9UII4 1024 aaKnown RBP16.4■□□□□ 0.22
HMGCS2-203ENST00000476640 PNMA3Q9UL41 463 aa16.4■□□□□ 0.22
HMGCS2-203ENST00000476640 MYH1P12882 1939 aa16.4■□□□□ 0.22
HMGCS2-203ENST00000476640 ECM2O94769 699 aaPredicted RBP16.39■□□□□ 0.21
HMGCS2-203ENST00000476640 MYCP01106 439 aaPredicted RBP16.39■□□□□ 0.21
HMGCS2-203ENST00000476640 UBXN2AP68543 259 aa16.39■□□□□ 0.21
HMGCS2-203ENST00000476640 PROCA1Q8NCQ7 364 aaPredicted RBP16.39■□□□□ 0.21
HMGCS2-203ENST00000476640 ZNF512BQ96KM6 892 aaPredicted RBP16.39■□□□□ 0.21
HMGCS2-203ENST00000476640 BIN2Q9UBW5 565 aaPredicted RBP16.39■□□□□ 0.21
HMGCS2-203ENST00000476640 AGTPBP1Q9UPW5 1226 aa16.39■□□□□ 0.21
HMGCS2-203ENST00000476640 DOCK3Q8IZD9 2030 aa16.39■□□□□ 0.21
HMGCS2-203ENST00000476640 PABPC4Q13310 644 aaKnown RBP eCLIP16.38■□□□□ 0.21
HMGCS2-203ENST00000476640 SLAIN1Q8ND83 568 aa16.38■□□□□ 0.21
HMGCS2-203ENST00000476640 AS3MTQ9HBK9 375 aa16.38■□□□□ 0.21
HMGCS2-203ENST00000476640 SNRKQ9NRH2 765 aa16.38■□□□□ 0.21
HMGCS2-203ENST00000476640 PI4KBQ9UBF8 816 aa16.38■□□□□ 0.21
HMGCS2-203ENST00000476640 MKI67P46013 3256 aaKnown RBP16.37■□□□□ 0.21
HMGCS2-203ENST00000476640 CTGFP29279 349 aa16.37■□□□□ 0.21
HMGCS2-203ENST00000476640 ZNF280CQ8ND82 737 aa16.37■□□□□ 0.21
HMGCS2-203ENST00000476640 SH3RF3Q8TEJ3 882 aaPredicted RBP16.37■□□□□ 0.21
HMGCS2-203ENST00000476640 DBNDD2Q9BQY9 259 aa16.37■□□□□ 0.21
HMGCS2-203ENST00000476640 TRIM34Q9BYJ4 488 aa16.37■□□□□ 0.21
HMGCS2-203ENST00000476640 NOP58Q9Y2X3 529 aaKnown RBP16.37■□□□□ 0.21
HMGCS2-203ENST00000476640 SIPA1L1O43166 1804 aa16.37■□□□□ 0.21
HMGCS2-203ENST00000476640 USP17L5A8MUK1 530 aa16.36■□□□□ 0.21
HMGCS2-203ENST00000476640 CAP2P40123 477 aa16.36■□□□□ 0.21
HMGCS2-203ENST00000476640 PPP4CP60510 307 aa16.36■□□□□ 0.21
HMGCS2-203ENST00000476640 PRKCZQ05513 592 aa16.36■□□□□ 0.21
HMGCS2-203ENST00000476640 CERS3Q8IU89 383 aa16.36■□□□□ 0.21
HMGCS2-203ENST00000476640 AATFQ9NY61 560 aaKnown RBP eCLIP16.36■□□□□ 0.21
HMGCS2-203ENST00000476640 BRCA2P51587 3418 aa16.36■□□□□ 0.21
HMGCS2-203ENST00000476640 FAM196BA6NMK8 535 aa16.35■□□□□ 0.21
HMGCS2-203ENST00000476640 TNPO2O14787 897 aaKnown RBP16.35■□□□□ 0.21
HMGCS2-203ENST00000476640 ZBTB7BO15156 539 aaPredicted RBP16.35■□□□□ 0.21
HMGCS2-203ENST00000476640 MS4A1P11836 297 aa16.35■□□□□ 0.21
HMGCS2-203ENST00000476640 CAPN2P17655 700 aa16.35■□□□□ 0.21
HMGCS2-203ENST00000476640 GCLCP48506 637 aaPredicted RBP16.35■□□□□ 0.21
HMGCS2-203ENST00000476640 SPP2Q13103 211 aa16.35■□□□□ 0.21
HMGCS2-203ENST00000476640 TMED8Q6PL24 325 aaPredicted RBP16.35■□□□□ 0.21
HMGCS2-203ENST00000476640 ERC1Q8IUD2 1116 aa16.35■□□□□ 0.21
HMGCS2-203ENST00000476640 CRACR2BQ8N4Y2 399 aaPredicted RBP16.35■□□□□ 0.21
HMGCS2-203ENST00000476640 COA7Q96BR5 231 aa16.35■□□□□ 0.21
HMGCS2-203ENST00000476640 C1orf115Q9H7X2 142 aa16.35■□□□□ 0.21
HMGCS2-203ENST00000476640 GINM1Q9NU53 330 aa16.35■□□□□ 0.21
HMGCS2-203ENST00000476640 ADCY3O60266 1144 aa16.34■□□□□ 0.21
HMGCS2-203ENST00000476640 CYP2E1P05181 493 aaPredicted RBP16.34■□□□□ 0.21
HMGCS2-203ENST00000476640 GJB1P08034 283 aa16.34■□□□□ 0.21
HMGCS2-203ENST00000476640 ASNSP08243 561 aa16.34■□□□□ 0.21
HMGCS2-203ENST00000476640 SLURP2P0DP57 97 aa16.34■□□□□ 0.21
HMGCS2-203ENST00000476640 CCL5P13501 91 aa16.34■□□□□ 0.21
HMGCS2-203ENST00000476640 MTFR1Q15390 333 aa16.34■□□□□ 0.21
HMGCS2-203ENST00000476640 FAM110CQ1W6H9 321 aa16.34■□□□□ 0.21
HMGCS2-203ENST00000476640 DIEXFQ68CQ4 756 aaKnown RBP16.34■□□□□ 0.21
HMGCS2-203ENST00000476640 FOXP4Q8IVH2 680 aaPredicted RBP16.34■□□□□ 0.21
HMGCS2-203ENST00000476640 MIER1Q8N108 512 aa16.34■□□□□ 0.21
HMGCS2-203ENST00000476640 TGFBRAP1Q8WUH2 860 aa16.34■□□□□ 0.21
HMGCS2-203ENST00000476640 RNF208Q9H0X6 261 aa16.34■□□□□ 0.21
HMGCS2-203ENST00000476640 HLA-DOAP06340 250 aa16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 ZAP70P43403 619 aa16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 GJA8P48165 433 aa16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 HMGCS2P54868 508 aa16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 IRF5Q13568 498 aa16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 HSP90AB4PQ58FF6 505 aa16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 TREML2Q5T2D2 321 aa16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 CCDC84Q86UT8 332 aaPredicted RBP16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 ANKRD13CQ8N6S4 541 aa16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 PXYLP1Q8TE99 480 aa16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 DBNLQ9UJU6 430 aaKnown RBP16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 FLT1P17948 1338 aa16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 ZBED9Q6R2W3 1325 aa16.33■□□□□ 0.2
HMGCS2-203ENST00000476640 RLBP1P12271 317 aa16.32■□□□□ 0.2
HMGCS2-203ENST00000476640 FLT3LGP49771 235 aa16.32■□□□□ 0.2
HMGCS2-203ENST00000476640 SH3D19Q5HYK7 790 aa16.32■□□□□ 0.2
HMGCS2-203ENST00000476640 HABP4Q5JVS0 413 aaKnown RBP16.32■□□□□ 0.2
HMGCS2-203ENST00000476640 MAPKAPK5Q8IW41 473 aa16.32■□□□□ 0.2
HMGCS2-203ENST00000476640 WDR18Q9BV38 432 aa16.32■□□□□ 0.2
HMGCS2-203ENST00000476640 TMOD4Q9NZQ9 345 aa16.32■□□□□ 0.2
HMGCS2-203ENST00000476640 GABRQQ9UN88 632 aa16.32■□□□□ 0.2
HMGCS2-203ENST00000476640 IDH1O75874 414 aaKnown RBP16.31■□□□□ 0.2
HMGCS2-203ENST00000476640 CYP7A1P22680 504 aa16.31■□□□□ 0.2
HMGCS2-203ENST00000476640 HTATIP2Q9BUP3 242 aa16.31■□□□□ 0.2
HMGCS2-203ENST00000476640 CCDC8Q9H0W5 538 aaPredicted RBP16.31■□□□□ 0.2
HMGCS2-203ENST00000476640 PIH1D3Q9NQM4 214 aaKnown RBP16.31■□□□□ 0.2
HMGCS2-203ENST00000476640 MYH8P13535 1937 aa16.3■□□□□ 0.2
HMGCS2-203ENST00000476640 C19orf81C9J6K1 198 aa16.3■□□□□ 0.2
HMGCS2-203ENST00000476640 BACE1P56817 501 aa16.3■□□□□ 0.2
HMGCS2-203ENST00000476640 IRX3P78415 501 aaPredicted RBP16.3■□□□□ 0.2
HMGCS2-203ENST00000476640 MAP3K12Q12852 859 aa16.3■□□□□ 0.2
HMGCS2-203ENST00000476640 CEP85Q6P2H3 762 aa16.3■□□□□ 0.2
HMGCS2-203ENST00000476640 ADGRA1Q86SQ6 560 aa16.3■□□□□ 0.2
HMGCS2-203ENST00000476640 METTL16Q86W50 562 aaKnown RBP16.3■□□□□ 0.2
HMGCS2-203ENST00000476640 EAF2Q96CJ1 260 aaPredicted RBP16.3■□□□□ 0.2
HMGCS2-203ENST00000476640 SHISA4Q96DD7 197 aa16.3■□□□□ 0.2
HMGCS2-203ENST00000476640 ASCC2Q9H1I8 757 aaPredicted RBP16.3■□□□□ 0.2
HMGCS2-203ENST00000476640 PALD1Q9ULE6 856 aa16.3■□□□□ 0.2
HMGCS2-203ENST00000476640 NAV1Q8NEY1 1877 aa16.29■□□□□ 0.2
HMGCS2-203ENST00000476640 INHAP05111 366 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms