RNA–Protein interactions for RNA: ENST00000476620.1

EPDR1-204, Transcript of ependymin related 1, humanhuman

TSL 4 BASIC

Gene EPDR1, Length 555 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-204ENST00000476620 COL3A1P02461 1466 aaPredicted RBP7.55□□□□□ -1.2
EPDR1-204ENST00000476620 GRXCR1A8MXD5 290 aa7.54□□□□□ -1.2
EPDR1-204ENST00000476620 KCNJ4P48050 445 aa7.54□□□□□ -1.2
EPDR1-204ENST00000476620 SMAD3P84022 425 aaKnown RBP7.54□□□□□ -1.2
EPDR1-204ENST00000476620 IRF5Q13568 498 aa7.54□□□□□ -1.2
EPDR1-204ENST00000476620 MICALL1Q8N3F8 863 aa7.54□□□□□ -1.2
EPDR1-204ENST00000476620 IL27Q8NEV9 243 aa7.54□□□□□ -1.2
EPDR1-204ENST00000476620 TRIB2Q92519 343 aa7.54□□□□□ -1.2
EPDR1-204ENST00000476620 UIMC1Q96RL1 719 aa7.54□□□□□ -1.2
EPDR1-204ENST00000476620 PHOX2BQ99453 314 aa7.54□□□□□ -1.2
EPDR1-204ENST00000476620 PARK7Q99497 189 aaKnown RBP7.54□□□□□ -1.2
EPDR1-204ENST00000476620 P2RX7Q99572 595 aaKnown RBP7.54□□□□□ -1.2
EPDR1-204ENST00000476620 PRKD2Q9BZL6 878 aa7.54□□□□□ -1.2
EPDR1-204ENST00000476620 ZCCHC17Q9NP64 241 aaKnown RBP7.54□□□□□ -1.2
EPDR1-204ENST00000476620 GJD2Q9UKL4 321 aa7.54□□□□□ -1.2
EPDR1-204ENST00000476620 TTF2Q9UNY4 1162 aaKnown RBP7.54□□□□□ -1.2
EPDR1-204ENST00000476620 SIPA1L3O60292 1781 aaPredicted RBP7.54□□□□□ -1.2
EPDR1-204ENST00000476620 PLIN1O60240 522 aa7.53□□□□□ -1.2
EPDR1-204ENST00000476620 HMGCRP04035 888 aa7.53□□□□□ -1.2
EPDR1-204ENST00000476620 ITGB8P26012 769 aa7.53□□□□□ -1.2
EPDR1-204ENST00000476620 PPP4CP60510 307 aa7.53□□□□□ -1.2
EPDR1-204ENST00000476620 PPATQ06203 517 aa7.53□□□□□ -1.2
EPDR1-204ENST00000476620 ZNF787Q6DD87 383 aa7.53□□□□□ -1.2
EPDR1-204ENST00000476620 RIC3Q7Z5B4 369 aa7.53□□□□□ -1.2
EPDR1-204ENST00000476620 TTLL11Q8NHH1 800 aa7.53□□□□□ -1.2
EPDR1-204ENST00000476620 COA7Q96BR5 231 aa7.53□□□□□ -1.2
EPDR1-204ENST00000476620 ZNF576Q9H609 170 aa7.53□□□□□ -1.2
EPDR1-204ENST00000476620 PHAXQ9H814 394 aaKnown RBP7.53□□□□□ -1.2
EPDR1-204ENST00000476620 LEMD3Q9Y2U8 911 aa7.53□□□□□ -1.2
EPDR1-204ENST00000476620 LAS1LQ9Y4W2 734 aaKnown RBP7.53□□□□□ -1.2
EPDR1-204ENST00000476620 COL1A1P02452 1464 aaPredicted RBP7.53□□□□□ -1.2
EPDR1-204ENST00000476620 NUP98P52948 1817 aa7.52□□□□□ -1.2
EPDR1-204ENST00000476620 COL2A1P02458 1487 aaPredicted RBP7.52□□□□□ -1.21
EPDR1-204ENST00000476620 TRIM43BA6NCK2 446 aa7.52□□□□□ -1.21
EPDR1-204ENST00000476620 CRKP46108 304 aa7.52□□□□□ -1.21
EPDR1-204ENST00000476620 RTP1P59025 263 aa7.52□□□□□ -1.21
EPDR1-204ENST00000476620 CACNB2Q08289 660 aaPredicted RBP7.52□□□□□ -1.21
EPDR1-204ENST00000476620 CCL14Q16627 93 aa7.52□□□□□ -1.21
EPDR1-204ENST00000476620 TRIM43Q96BQ3 446 aaPredicted RBP7.52□□□□□ -1.21
EPDR1-204ENST00000476620 IQSEC3Q9UPP2 1182 aaPredicted RBP7.52□□□□□ -1.21
EPDR1-204ENST00000476620 KCNH4Q9UQ05 1017 aa7.52□□□□□ -1.21
EPDR1-204ENST00000476620 NUDCQ9Y266 331 aa7.52□□□□□ -1.21
EPDR1-204ENST00000476620 ZHX2Q9Y6X8 837 aa7.52□□□□□ -1.21
EPDR1-204ENST00000476620 V9GY48 417 aaPredicted RBP7.52□□□□□ -1.21
EPDR1-204ENST00000476620 LRRC37AA6NMS7 1700 aa7.52□□□□□ -1.21
EPDR1-204ENST00000476620 MUC6Q6W4X9 2439 aa7.51□□□□□ -1.21
EPDR1-204ENST00000476620 PCCAP05165 728 aaPredicted RBP7.51□□□□□ -1.21
EPDR1-204ENST00000476620 DNAJB2P25686 324 aa7.51□□□□□ -1.21
EPDR1-204ENST00000476620 CTSWP56202 376 aa7.51□□□□□ -1.21
EPDR1-204ENST00000476620 CHRNDQ07001 517 aa7.51□□□□□ -1.21
EPDR1-204ENST00000476620 TCP10Q12799 353 aa7.51□□□□□ -1.21
EPDR1-204ENST00000476620 TRIM28Q13263 835 aaKnown RBP7.51□□□□□ -1.21
EPDR1-204ENST00000476620 TNFAIP1Q13829 316 aa7.51□□□□□ -1.21
EPDR1-204ENST00000476620 TREML2Q5T2D2 321 aa7.51□□□□□ -1.21
EPDR1-204ENST00000476620 ZFPM1Q8IX07 1006 aa7.51□□□□□ -1.21
EPDR1-204ENST00000476620 SMCR8Q8TEV9 937 aaPredicted RBP7.51□□□□□ -1.21
EPDR1-204ENST00000476620 RNPC3Q96LT9 517 aaKnown RBP7.51□□□□□ -1.21
EPDR1-204ENST00000476620 CDC5LQ99459 802 aaKnown RBP7.51□□□□□ -1.21
EPDR1-204ENST00000476620 CD320Q9NPF0 282 aa7.51□□□□□ -1.21
EPDR1-204ENST00000476620 PRKAG2Q9UGJ0 569 aa7.51□□□□□ -1.21
EPDR1-204ENST00000476620 ARIH1Q9Y4X5 557 aaPredicted RBP7.51□□□□□ -1.21
EPDR1-204ENST00000476620 SMIM22K7EJ46 135 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 TNNI2P48788 182 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 MMP14P50281 582 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 EIF4G2P78344 907 aaKnown RBP eCLIP7.5□□□□□ -1.21
EPDR1-204ENST00000476620 NHLH1Q02575 133 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 NFE2L2Q16236 605 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 MFSD14BQ5SR56 506 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 HDGFL1Q5TGJ6 251 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 ANO1Q5XXA6 986 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 PACS2Q86VP3 889 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 TIFAQ96CG3 184 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 CFAP53Q96M91 514 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 ZNF341Q9BYN7 854 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 DAGLAQ9Y4D2 1042 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 NDUFB9Q9Y6M9 179 aa7.5□□□□□ -1.21
EPDR1-204ENST00000476620 TRIM75PA6NK02 468 aa7.49□□□□□ -1.21
EPDR1-204ENST00000476620 IL1R1P14778 569 aa7.49□□□□□ -1.21
EPDR1-204ENST00000476620 IGHMBP2P38935 993 aaKnown RBP7.49□□□□□ -1.21
EPDR1-204ENST00000476620 GYG1P46976 350 aa7.49□□□□□ -1.21
EPDR1-204ENST00000476620 CHAF1AQ13111 956 aaPredicted RBP7.49□□□□□ -1.21
EPDR1-204ENST00000476620 SKIV2LQ15477 1246 aaKnown RBP7.49□□□□□ -1.21
EPDR1-204ENST00000476620 TRIM60Q495X7 471 aa7.49□□□□□ -1.21
EPDR1-204ENST00000476620 GJC2Q5T442 439 aaPredicted RBP7.49□□□□□ -1.21
EPDR1-204ENST00000476620 MAP3K21Q5TCX8 1036 aa7.49□□□□□ -1.21
EPDR1-204ENST00000476620 FERMT2Q96AC1 680 aa7.49□□□□□ -1.21
EPDR1-204ENST00000476620 GAS2L1Q99501 681 aaPredicted RBP7.49□□□□□ -1.21
EPDR1-204ENST00000476620 CWC25Q9NXE8 425 aaPredicted RBP7.49□□□□□ -1.21
EPDR1-204ENST00000476620 SERPINA10Q9UK55 444 aa7.49□□□□□ -1.21
EPDR1-204ENST00000476620 LAMB2P55268 1798 aa7.48□□□□□ -1.21
EPDR1-204ENST00000476620 RFXAPO00287 272 aa7.48□□□□□ -1.21
EPDR1-204ENST00000476620 ELL2O00472 640 aaPredicted RBP7.48□□□□□ -1.21
EPDR1-204ENST00000476620 ITGA6P23229 1130 aa7.48□□□□□ -1.21
EPDR1-204ENST00000476620 PPP1R18Q6NYC8 613 aa7.48□□□□□ -1.21
EPDR1-204ENST00000476620 CCDC129Q6ZRS4 1044 aa7.48□□□□□ -1.21
EPDR1-204ENST00000476620 FBXL18Q96ME1 805 aa7.48□□□□□ -1.21
EPDR1-204ENST00000476620 PLEKHF1Q96S99 279 aa7.48□□□□□ -1.21
EPDR1-204ENST00000476620 MPHOSPH8Q99549 860 aa7.48□□□□□ -1.21
EPDR1-204ENST00000476620 ANKRD2Q9GZV1 360 aa7.48□□□□□ -1.21
EPDR1-204ENST00000476620 ALPK3Q96L96 1907 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms