RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 LMNB2Q03252 620 aa8.03□□□□□ -1.12
SSR3-206ENST00000476217 NFKBIBQ15653 356 aa8.03□□□□□ -1.12
SSR3-206ENST00000476217 TSNAXIP1Q2TAA8 658 aa8.03□□□□□ -1.12
SSR3-206ENST00000476217 TMEM74Q96NL1 305 aa8.03□□□□□ -1.12
SSR3-206ENST00000476217 METTL22Q9BUU2 404 aaPredicted RBP8.03□□□□□ -1.12
SSR3-206ENST00000476217 SEMA6CQ9H3T2 930 aa8.03□□□□□ -1.12
SSR3-206ENST00000476217 PICK1Q9NRD5 415 aa8.03□□□□□ -1.12
SSR3-206ENST00000476217 DISC1Q9NRI5 854 aa8.03□□□□□ -1.12
SSR3-206ENST00000476217 PCOLCE2Q9UKZ9 415 aa8.03□□□□□ -1.12
SSR3-206ENST00000476217 HMX2A2RU54 273 aa8.02□□□□□ -1.13
SSR3-206ENST00000476217 RAB6AP20340 208 aa8.02□□□□□ -1.13
SSR3-206ENST00000476217 CYP27A1Q02318 531 aa8.02□□□□□ -1.13
SSR3-206ENST00000476217 MAP3K11Q16584 847 aa8.02□□□□□ -1.13
SSR3-206ENST00000476217 SMYD4Q8IYR2 804 aaPredicted RBP8.02□□□□□ -1.13
SSR3-206ENST00000476217 PHC3Q8NDX5 983 aa8.02□□□□□ -1.13
SSR3-206ENST00000476217 GAL3ST3Q96A11 431 aa8.02□□□□□ -1.13
SSR3-206ENST00000476217 PODXL2Q9NZ53 605 aa8.02□□□□□ -1.13
SSR3-206ENST00000476217 CLIP1P30622 1438 aa8.02□□□□□ -1.13
SSR3-206ENST00000476217 SYNJ2O15056 1496 aa8.01□□□□□ -1.13
SSR3-206ENST00000476217 GBP2P32456 591 aaPredicted RBP8.01□□□□□ -1.13
SSR3-206ENST00000476217 RANGAP1P46060 587 aaPredicted RBP8.01□□□□□ -1.13
SSR3-206ENST00000476217 RING1Q06587 406 aa8.01□□□□□ -1.13
SSR3-206ENST00000476217 TTLL4Q14679 1199 aa8.01□□□□□ -1.13
SSR3-206ENST00000476217 RASIP1Q5U651 963 aa8.01□□□□□ -1.13
SSR3-206ENST00000476217 ERMP1Q7Z2K6 904 aa8.01□□□□□ -1.13
SSR3-206ENST00000476217 NFICP08651 508 aa8□□□□□ -1.13
SSR3-206ENST00000476217 TFE3P19532 575 aaPredicted RBP8□□□□□ -1.13
SSR3-206ENST00000476217 MRRFQ96E11 262 aaKnown RBP8□□□□□ -1.13
SSR3-206ENST00000476217 RHOVQ96L33 236 aa8□□□□□ -1.13
SSR3-206ENST00000476217 BACH2Q9BYV9 841 aa8□□□□□ -1.13
SSR3-206ENST00000476217 SSU72Q9NP77 194 aaKnown RBP8□□□□□ -1.13
SSR3-206ENST00000476217 RNF112Q9ULX5 631 aa8□□□□□ -1.13
SSR3-206ENST00000476217 DAGLAQ9Y4D2 1042 aa8□□□□□ -1.13
SSR3-206ENST00000476217 GRIN2AQ12879 1464 aa8□□□□□ -1.13
SSR3-206ENST00000476217 ROBO2Q9HCK4 1378 aa7.99□□□□□ -1.13
SSR3-206ENST00000476217 SCAMP3O14828 347 aaKnown RBP7.99□□□□□ -1.13
SSR3-206ENST00000476217 RNGTTO60942 597 aaKnown RBP7.99□□□□□ -1.13
SSR3-206ENST00000476217 BPNT1O95861 308 aa7.99□□□□□ -1.13
SSR3-206ENST00000476217 ZNF76P36508 570 aa7.99□□□□□ -1.13
SSR3-206ENST00000476217 RPL6Q02878 288 aaKnown RBP7.99□□□□□ -1.13
SSR3-206ENST00000476217 CAMK2GQ13555 558 aaPredicted RBP7.99□□□□□ -1.13
SSR3-206ENST00000476217 CDC37L1Q7L3B6 337 aa7.99□□□□□ -1.13
SSR3-206ENST00000476217 CYFIP1Q7L576 1253 aa7.99□□□□□ -1.13
SSR3-206ENST00000476217 ZNF507Q8TCN5 953 aa7.99□□□□□ -1.13
SSR3-206ENST00000476217 TBC1D32Q96NH3 1257 aa7.99□□□□□ -1.13
SSR3-206ENST00000476217 ATG3Q9NT62 314 aa7.99□□□□□ -1.13
SSR3-206ENST00000476217 PRKAG2Q9UGJ0 569 aa7.99□□□□□ -1.13
SSR3-206ENST00000476217 GGT7Q9UJ14 662 aa7.99□□□□□ -1.13
SSR3-206ENST00000476217 CHD1O14646 1710 aa7.98□□□□□ -1.13
SSR3-206ENST00000476217 DCDC2CA8MYV0 355 aa7.98□□□□□ -1.13
SSR3-206ENST00000476217 HCLS1P14317 486 aaPredicted RBP7.98□□□□□ -1.13
SSR3-206ENST00000476217 GRIK1P39086 918 aa7.98□□□□□ -1.13
SSR3-206ENST00000476217 PDE4BQ07343 736 aa7.98□□□□□ -1.13
SSR3-206ENST00000476217 ZBTB37Q5TC79 503 aa7.98□□□□□ -1.13
SSR3-206ENST00000476217 SEZ6L2Q6UXD5 910 aa7.98□□□□□ -1.13
SSR3-206ENST00000476217 MPRIPQ6WCQ1 1025 aa7.98□□□□□ -1.13
SSR3-206ENST00000476217 ZAR1Q86SH2 424 aa7.98□□□□□ -1.13
SSR3-206ENST00000476217 GATAD2BQ8WXI9 593 aa7.98□□□□□ -1.13
SSR3-206ENST00000476217 TLR6Q9Y2C9 796 aa7.98□□□□□ -1.13
SSR3-206ENST00000476217 PCDHB5Q9Y5E4 795 aa7.98□□□□□ -1.13
SSR3-206ENST00000476217 IQGAP2Q13576 1575 aa7.97□□□□□ -1.13
SSR3-206ENST00000476217 SEPT6Q14141 434 aa7.97□□□□□ -1.13
SSR3-206ENST00000476217 PPM1JQ5JR12 505 aa7.97□□□□□ -1.13
SSR3-206ENST00000476217 WIPI1Q5MNZ9 446 aaPredicted RBP7.97□□□□□ -1.13
SSR3-206ENST00000476217 DUSP27Q5VZP5 1158 aa7.97□□□□□ -1.13
SSR3-206ENST00000476217 INTS5Q6P9B9 1019 aaKnown RBP7.97□□□□□ -1.13
SSR3-206ENST00000476217 C12orf40Q86WS4 652 aa7.97□□□□□ -1.13
SSR3-206ENST00000476217 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.97□□□□□ -1.13
SSR3-206ENST00000476217 RNF34Q969K3 372 aa7.97□□□□□ -1.13
SSR3-206ENST00000476217 PLPPR2Q96GM1 343 aa7.97□□□□□ -1.13
SSR3-206ENST00000476217 OSBPL1AQ9BXW6 950 aa7.97□□□□□ -1.13
SSR3-206ENST00000476217 WNT10AQ9GZT5 417 aa7.97□□□□□ -1.13
SSR3-206ENST00000476217 KCNQ5Q9NR82 932 aa7.97□□□□□ -1.13
SSR3-206ENST00000476217 SUPT16HQ9Y5B9 1047 aaKnown RBP7.97□□□□□ -1.13
SSR3-206ENST00000476217 PF4P02776 101 aa7.96□□□□□ -1.14
SSR3-206ENST00000476217 CYP27C1Q4G0S4 372 aa7.96□□□□□ -1.14
SSR3-206ENST00000476217 SNAP47Q5SQN1 464 aa7.96□□□□□ -1.14
SSR3-206ENST00000476217 LRFN4Q6PJG9 635 aa7.96□□□□□ -1.14
SSR3-206ENST00000476217 ISL2Q96A47 359 aa7.96□□□□□ -1.14
SSR3-206ENST00000476217 MFSD14AQ96MC6 490 aa7.96□□□□□ -1.14
SSR3-206ENST00000476217 KBTBD4Q9NVX7 518 aa7.96□□□□□ -1.14
SSR3-206ENST00000476217 EFCAB5A4FU69 1503 aa7.96□□□□□ -1.14
SSR3-206ENST00000476217 CEP170Q5SW79 1584 aa7.96□□□□□ -1.14
SSR3-206ENST00000476217 PRAMEF27A3QJZ7 478 aa7.95□□□□□ -1.14
SSR3-206ENST00000476217 GFRA2O00451 464 aa7.95□□□□□ -1.14
SSR3-206ENST00000476217 CILPO75339 1184 aa7.95□□□□□ -1.14
SSR3-206ENST00000476217 RECKO95980 971 aa7.95□□□□□ -1.14
SSR3-206ENST00000476217 NEFMP07197 916 aa7.95□□□□□ -1.14
SSR3-206ENST00000476217 ITGB7P26010 798 aa7.95□□□□□ -1.14
SSR3-206ENST00000476217 EIF4A3P38919 411 aaKnown RBP7.95□□□□□ -1.14
SSR3-206ENST00000476217 CAP2P40123 477 aa7.95□□□□□ -1.14
SSR3-206ENST00000476217 FANCCQ00597 558 aa7.95□□□□□ -1.14
SSR3-206ENST00000476217 PTPN11Q06124 597 aaPredicted RBP7.95□□□□□ -1.14
SSR3-206ENST00000476217 MPP2Q14168 576 aa7.95□□□□□ -1.14
SSR3-206ENST00000476217 INPP5AQ14642 412 aa7.95□□□□□ -1.14
SSR3-206ENST00000476217 LDLRAD1Q5T700 205 aa7.95□□□□□ -1.14
SSR3-206ENST00000476217 ZDHHC13Q8IUH4 622 aa7.95□□□□□ -1.14
SSR3-206ENST00000476217 SHKBP1Q8TBC3 707 aa7.95□□□□□ -1.14
SSR3-206ENST00000476217 JARID2Q92833 1246 aaPredicted RBP7.95□□□□□ -1.14
SSR3-206ENST00000476217 C1GALT1Q9NS00 363 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms