RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 BTAF1O14981 1849 aa18.49■□□□□ 0.55
VARS2-207ENST00000476162 WDHD1O75717 1129 aaPredicted RBP18.49■□□□□ 0.55
VARS2-207ENST00000476162 CCDC82Q8N4S0 544 aa18.49■□□□□ 0.55
VARS2-207ENST00000476162 PIBF1Q8WXW3 757 aa18.49■□□□□ 0.55
VARS2-207ENST00000476162 NID2Q14112 1375 aa18.49■□□□□ 0.55
VARS2-207ENST00000476162 CACNA1SQ13698 1873 aa18.49■□□□□ 0.55
VARS2-207ENST00000476162 CYP2D7A0A087X1C5 515 aa18.48■□□□□ 0.55
VARS2-207ENST00000476162 GOLGA6L6A8MZA4 724 aa18.48■□□□□ 0.55
VARS2-207ENST00000476162 SEMA3EO15041 775 aa18.48■□□□□ 0.55
VARS2-207ENST00000476162 HIBADHP31937 336 aaKnown RBP18.48■□□□□ 0.55
VARS2-207ENST00000476162 PLA2G4DQ86XP0 818 aa18.48■□□□□ 0.55
VARS2-207ENST00000476162 CMTR1Q8N1G2 835 aaKnown RBP18.48■□□□□ 0.55
VARS2-207ENST00000476162 NUP133Q8WUM0 1156 aa18.48■□□□□ 0.55
VARS2-207ENST00000476162 ESR2Q92731 530 aa18.48■□□□□ 0.55
VARS2-207ENST00000476162 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.48■□□□□ 0.55
VARS2-207ENST00000476162 KCNF1Q9H3M0 494 aa18.48■□□□□ 0.55
VARS2-207ENST00000476162 GOLGA6L19H0YKK7 550 aa18.47■□□□□ 0.55
VARS2-207ENST00000476162 CMA1P23946 247 aa18.47■□□□□ 0.55
VARS2-207ENST00000476162 TM4SF1P30408 202 aa18.47■□□□□ 0.55
VARS2-207ENST00000476162 ZNF75DP51815 510 aa18.47■□□□□ 0.55
VARS2-207ENST00000476162 ZNF654Q8IZM8 581 aa18.47■□□□□ 0.55
VARS2-207ENST00000476162 TSC1Q92574 1164 aa18.47■□□□□ 0.55
VARS2-207ENST00000476162 NSUN4Q96CB9 384 aaKnown RBP18.47■□□□□ 0.55
VARS2-207ENST00000476162 ANKRD2Q9GZV1 360 aa18.47■□□□□ 0.55
VARS2-207ENST00000476162 ANO10Q9NW15 660 aa18.47■□□□□ 0.55
VARS2-207ENST00000476162 MECOMQ03112 1051 aa18.47■□□□□ 0.55
VARS2-207ENST00000476162 NBPF11Q86T75 865 aa18.47■□□□□ 0.55
VARS2-207ENST00000476162 C17orf53Q8N3J3 647 aaPredicted RBP18.47■□□□□ 0.55
VARS2-207ENST00000476162 WASF1Q92558 559 aa18.47■□□□□ 0.55
VARS2-207ENST00000476162 BRIP1Q9BX63 1249 aa18.47■□□□□ 0.55
VARS2-207ENST00000476162 TNKSO95271 1327 aa18.47■□□□□ 0.55
VARS2-207ENST00000476162 ZNF202O95125 648 aa18.46■□□□□ 0.55
VARS2-207ENST00000476162 TPM3P06753 285 aa18.46■□□□□ 0.55
VARS2-207ENST00000476162 PFKFB1P16118 471 aa18.46■□□□□ 0.55
VARS2-207ENST00000476162 PTPAQ15257 358 aa18.46■□□□□ 0.55
VARS2-207ENST00000476162 SEC23AQ15436 765 aa18.46■□□□□ 0.55
VARS2-207ENST00000476162 TRIM22Q8IYM9 498 aa18.46■□□□□ 0.55
VARS2-207ENST00000476162 FANCBQ8NB91 859 aa18.46■□□□□ 0.55
VARS2-207ENST00000476162 FBXW7Q969H0 707 aa18.46■□□□□ 0.55
VARS2-207ENST00000476162 MAP3K14Q99558 947 aa18.46■□□□□ 0.55
VARS2-207ENST00000476162 CCDC196A0A1B0GTZ2 297 aa18.46■□□□□ 0.55
VARS2-207ENST00000476162 NPHP1O15259 732 aa18.46■□□□□ 0.55
VARS2-207ENST00000476162 CHAF1AQ13111 956 aaPredicted RBP18.46■□□□□ 0.55
VARS2-207ENST00000476162 NOLC1Q14978 699 aaKnown RBP eCLIP18.46■□□□□ 0.55
VARS2-207ENST00000476162 CRACR2BQ8N4Y2 399 aaPredicted RBP18.46■□□□□ 0.55
VARS2-207ENST00000476162 KIAA1468Q9P260 1216 aa18.46■□□□□ 0.55
VARS2-207ENST00000476162 MROH7-TTC4A0A0A0MT08 1334 aa18.46■□□□□ 0.55
VARS2-207ENST00000476162 TXNRD3Q86VQ6 643 aa18.45■□□□□ 0.54
VARS2-207ENST00000476162 DRC7Q8IY82 874 aa18.45■□□□□ 0.54
VARS2-207ENST00000476162 KCNJ14Q9UNX9 436 aa18.45■□□□□ 0.54
VARS2-207ENST00000476162 ECM29Q5VYK3 1845 aa18.45■□□□□ 0.54
VARS2-207ENST00000476162 BECN2A8MW95 431 aa18.45■□□□□ 0.54
VARS2-207ENST00000476162 BTBD18B2RXH4 712 aa18.45■□□□□ 0.54
VARS2-207ENST00000476162 PPP6R2O75170 966 aa18.45■□□□□ 0.54
VARS2-207ENST00000476162 PRDM1O75626 825 aa18.45■□□□□ 0.54
VARS2-207ENST00000476162 MMP1P03956 469 aa18.45■□□□□ 0.54
VARS2-207ENST00000476162 PTGS1P23219 599 aa18.45■□□□□ 0.54
VARS2-207ENST00000476162 PRDX5P30044 214 aa18.45■□□□□ 0.54
VARS2-207ENST00000476162 RFC4P35249 363 aa18.45■□□□□ 0.54
VARS2-207ENST00000476162 CTR9Q6PD62 1173 aa18.45■□□□□ 0.54
VARS2-207ENST00000476162 DHX40Q8IX18 779 aaKnown RBP18.45■□□□□ 0.54
VARS2-207ENST00000476162 COL24A1Q17RW2 1714 aa18.44■□□□□ 0.54
VARS2-207ENST00000476162 USP17L12C9JPN9 530 aa18.44■□□□□ 0.54
VARS2-207ENST00000476162 USP17L21D6R901 530 aa18.44■□□□□ 0.54
VARS2-207ENST00000476162 RCAN1P53805 252 aa18.44■□□□□ 0.54
VARS2-207ENST00000476162 NOSTRINQ8IVI9 506 aa18.44■□□□□ 0.54
VARS2-207ENST00000476162 ENAHQ8N8S7 591 aaPredicted RBP18.44■□□□□ 0.54
VARS2-207ENST00000476162 JMYQ8N9B5 988 aa18.44■□□□□ 0.54
VARS2-207ENST00000476162 ZSCAN10Q96SZ4 725 aaPredicted RBP18.44■□□□□ 0.54
VARS2-207ENST00000476162 AATFQ9NY61 560 aaKnown RBP eCLIP18.44■□□□□ 0.54
VARS2-207ENST00000476162 PYCARDQ9ULZ3 195 aa18.44■□□□□ 0.54
VARS2-207ENST00000476162 JAG2Q9Y219 1238 aa18.44■□□□□ 0.54
VARS2-207ENST00000476162 DEXIO95424 95 aa18.43■□□□□ 0.54
VARS2-207ENST00000476162 TRAPPC3LQ5T215 181 aa18.43■□□□□ 0.54
VARS2-207ENST00000476162 SHC4Q6S5L8 630 aa18.43■□□□□ 0.54
VARS2-207ENST00000476162 CCDC186Q7Z3E2 898 aa18.43■□□□□ 0.54
VARS2-207ENST00000476162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.43■□□□□ 0.54
VARS2-207ENST00000476162 DIS3L2Q8IYB7 885 aaKnown RBP18.43■□□□□ 0.54
VARS2-207ENST00000476162 CEP57L1Q8IYX8 460 aa18.43■□□□□ 0.54
VARS2-207ENST00000476162 NRBP1Q9UHY1 535 aa18.43■□□□□ 0.54
VARS2-207ENST00000476162 PDS5AQ29RF7 1337 aaKnown RBP18.43■□□□□ 0.54
VARS2-207ENST00000476162 NHSQ6T4R5 1651 aa18.43■□□□□ 0.54
VARS2-207ENST00000476162 THSD7AQ9UPZ6 1657 aa18.43■□□□□ 0.54
VARS2-207ENST00000476162 SLC3A2P08195 630 aaKnown RBP18.43■□□□□ 0.54
VARS2-207ENST00000476162 EVX2Q03828 476 aa18.43■□□□□ 0.54
VARS2-207ENST00000476162 SAFBQ15424 915 aaKnown RBP eCLIP18.43■□□□□ 0.54
VARS2-207ENST00000476162 DNTTIP2Q5QJE6 756 aaKnown RBP18.42■□□□□ 0.54
VARS2-207ENST00000476162 SARM1Q6SZW1 724 aa18.42■□□□□ 0.54
VARS2-207ENST00000476162 SLC51AQ86UW1 340 aa18.42■□□□□ 0.54
VARS2-207ENST00000476162 KIAA1524Q8TCG1 905 aa18.42■□□□□ 0.54
VARS2-207ENST00000476162 CLIC6Q96NY7 704 aa18.42■□□□□ 0.54
VARS2-207ENST00000476162 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.42■□□□□ 0.54
VARS2-207ENST00000476162 BAZ2AQ9UIF9 1905 aaKnown RBP18.42■□□□□ 0.54
VARS2-207ENST00000476162 SPATA31A6Q5VVP1 1343 aa18.42■□□□□ 0.54
VARS2-207ENST00000476162 FGRP09769 529 aa18.42■□□□□ 0.54
VARS2-207ENST00000476162 SYKP43405 635 aa18.42■□□□□ 0.54
VARS2-207ENST00000476162 DPCR1Q3MIW9 517 aa18.42■□□□□ 0.54
VARS2-207ENST00000476162 FAM196AQ6ZSG2 479 aa18.42■□□□□ 0.54
VARS2-207ENST00000476162 GJD4Q96KN9 370 aaPredicted RBP18.42■□□□□ 0.54
VARS2-207ENST00000476162 NAT10Q9H0A0 1025 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms