RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 ATP8A2Q9NTI2 1148 aa18.18■□□□□ 0.5
SNX13-207ENST00000475800 PI4KBQ9UBF8 816 aa18.18■□□□□ 0.5
SNX13-207ENST00000475800 DDTLA6NHG4 134 aaPredicted RBP18.17■□□□□ 0.5
SNX13-207ENST00000475800 TBC1D12O60347 775 aa18.17■□□□□ 0.5
SNX13-207ENST00000475800 HLA-DOAP06340 250 aa18.17■□□□□ 0.5
SNX13-207ENST00000475800 GNAT2P19087 354 aa18.17■□□□□ 0.5
SNX13-207ENST00000475800 MAP3K10Q02779 954 aa18.17■□□□□ 0.5
SNX13-207ENST00000475800 ZMYM1Q5SVZ6 1142 aa18.17■□□□□ 0.5
SNX13-207ENST00000475800 TTC22Q5TAA0 569 aa18.17■□□□□ 0.5
SNX13-207ENST00000475800 SH3BP5LQ7L8J4 393 aa18.17■□□□□ 0.5
SNX13-207ENST00000475800 SLC10A4Q96EP9 437 aa18.17■□□□□ 0.5
SNX13-207ENST00000475800 ARMT1Q9H993 441 aa18.17■□□□□ 0.5
SNX13-207ENST00000475800 HERC5Q9UII4 1024 aaKnown RBP18.17■□□□□ 0.5
SNX13-207ENST00000475800 BAZ2AQ9UIF9 1905 aaKnown RBP18.16■□□□□ 0.5
SNX13-207ENST00000475800 DDX60LQ5H9U9 1706 aaKnown RBP18.16■□□□□ 0.5
SNX13-207ENST00000475800 HIP1O00291 1037 aa18.16■□□□□ 0.5
SNX13-207ENST00000475800 TM4SF4P48230 202 aa18.16■□□□□ 0.5
SNX13-207ENST00000475800 MAP3K9P80192 1104 aa18.16■□□□□ 0.5
SNX13-207ENST00000475800 SREBF2Q12772 1141 aa18.16■□□□□ 0.5
SNX13-207ENST00000475800 SLFNL1Q499Z3 407 aa18.16■□□□□ 0.5
SNX13-207ENST00000475800 SPRYD7Q5W111 196 aa18.16■□□□□ 0.5
SNX13-207ENST00000475800 TTC6Q86TZ1 520 aa18.16■□□□□ 0.5
SNX13-207ENST00000475800 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNX13-207ENST00000475800 OSBP2Q969R2 916 aa18.16■□□□□ 0.5
SNX13-207ENST00000475800 CSADQ9Y600 493 aa18.16■□□□□ 0.5
SNX13-207ENST00000475800 GPR25O00155 361 aa18.15■□□□□ 0.5
SNX13-207ENST00000475800 MIGA2Q7L4E1 593 aa18.15■□□□□ 0.5
SNX13-207ENST00000475800 FOXP4Q8IVH2 680 aaPredicted RBP18.15■□□□□ 0.5
SNX13-207ENST00000475800 AMOTL1Q8IY63 956 aa18.15■□□□□ 0.5
SNX13-207ENST00000475800 WRNIP1Q96S55 665 aa18.15■□□□□ 0.5
SNX13-207ENST00000475800 STRBPQ96SI9 672 aaKnown RBP18.15■□□□□ 0.5
SNX13-207ENST00000475800 HELLSQ9NRZ9 838 aa18.15■□□□□ 0.5
SNX13-207ENST00000475800 ZNF112Q9UJU3 913 aa18.15■□□□□ 0.5
SNX13-207ENST00000475800 TAOK2Q9UL54 1235 aa18.15■□□□□ 0.5
SNX13-207ENST00000475800 HPS5Q9UPZ3 1129 aa18.15■□□□□ 0.5
SNX13-207ENST00000475800 SLC4A4Q9Y6R1 1079 aa18.15■□□□□ 0.5
SNX13-207ENST00000475800 SIPA1L1O43166 1804 aa18.14■□□□□ 0.5
SNX13-207ENST00000475800 GPAA1O43292 621 aa18.14■□□□□ 0.49
SNX13-207ENST00000475800 CHGBP05060 677 aa18.14■□□□□ 0.49
SNX13-207ENST00000475800 GIMAP6Q6P9H5 292 aa18.14■□□□□ 0.49
SNX13-207ENST00000475800 TRIM34Q9BYJ4 488 aa18.14■□□□□ 0.49
SNX13-207ENST00000475800 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNX13-207ENST00000475800 DCP1AQ9NPI6 582 aaPredicted RBP18.14■□□□□ 0.49
SNX13-207ENST00000475800 PALD1Q9ULE6 856 aa18.14■□□□□ 0.49
SNX13-207ENST00000475800 CRACR2BQ8N4Y2 399 aaPredicted RBP18.13■□□□□ 0.49
SNX13-207ENST00000475800 SDR42E1Q8WUS8 393 aa18.13■□□□□ 0.49
SNX13-207ENST00000475800 WNK4Q96J92 1243 aa18.13■□□□□ 0.49
SNX13-207ENST00000475800 EHD4Q9H223 541 aa18.13■□□□□ 0.49
SNX13-207ENST00000475800 MCM9Q9NXL9 1143 aa18.13■□□□□ 0.49
SNX13-207ENST00000475800 SAP30BPQ9UHR5 308 aaKnown RBP18.13■□□□□ 0.49
SNX13-207ENST00000475800 DOCK1Q14185 1865 aa18.12■□□□□ 0.49
SNX13-207ENST00000475800 MYH8P13535 1937 aa18.12■□□□□ 0.49
SNX13-207ENST00000475800 M0R2C6 588 aa18.12■□□□□ 0.49
SNX13-207ENST00000475800 POLR3DP05423 398 aaPredicted RBP18.12■□□□□ 0.49
SNX13-207ENST00000475800 SDSP20132 328 aa18.12■□□□□ 0.49
SNX13-207ENST00000475800 MFAP1P55081 439 aaKnown RBP18.12■□□□□ 0.49
SNX13-207ENST00000475800 NOL9Q5SY16 702 aaKnown RBP18.12■□□□□ 0.49
SNX13-207ENST00000475800 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.12■□□□□ 0.49
SNX13-207ENST00000475800 METTL16Q86W50 562 aaKnown RBP18.12■□□□□ 0.49
SNX13-207ENST00000475800 DIAPH3Q9NSV4 1193 aa18.12■□□□□ 0.49
SNX13-207ENST00000475800 LAMB1P07942 1786 aa18.12■□□□□ 0.49
SNX13-207ENST00000475800 PRKAB2O43741 272 aa18.11■□□□□ 0.49
SNX13-207ENST00000475800 CTNND1O60716 968 aaKnown RBP18.11■□□□□ 0.49
SNX13-207ENST00000475800 FKTNO75072 461 aa18.11■□□□□ 0.49
SNX13-207ENST00000475800 ZBTB48P10074 688 aaPredicted RBP18.11■□□□□ 0.49
SNX13-207ENST00000475800 GSPT1P15170 499 aaKnown RBP18.11■□□□□ 0.49
SNX13-207ENST00000475800 VGLL4Q14135 290 aa18.11■□□□□ 0.49
SNX13-207ENST00000475800 MCMDC2Q4G0Z9 681 aa18.11■□□□□ 0.49
SNX13-207ENST00000475800 NACAP1Q9BZK3 213 aa18.11■□□□□ 0.49
SNX13-207ENST00000475800 ELP3Q9H9T3 547 aa18.11■□□□□ 0.49
SNX13-207ENST00000475800 ARPP21Q9UBL0 812 aaPredicted RBP18.11■□□□□ 0.49
SNX13-207ENST00000475800 SERPINB13Q9UIV8 391 aa18.11■□□□□ 0.49
SNX13-207ENST00000475800 TNRC18O15417 2968 aaPredicted RBP18.11■□□□□ 0.49
SNX13-207ENST00000475800 ATAD5Q96QE3 1844 aa18.1■□□□□ 0.49
SNX13-207ENST00000475800 MANSC4A6NHS7 340 aaPredicted RBP18.1■□□□□ 0.49
SNX13-207ENST00000475800 PHF20L1A8MW92 1017 aa18.1■□□□□ 0.49
SNX13-207ENST00000475800 PATL2C9JE40 543 aaKnown RBP18.1■□□□□ 0.49
SNX13-207ENST00000475800 IFNL1Q8IU54 200 aa18.1■□□□□ 0.49
SNX13-207ENST00000475800 GSG1L2A8MUP6 293 aa18.09■□□□□ 0.49
SNX13-207ENST00000475800 IGF2BP3O00425 579 aaKnown RBP eCLIP18.09■□□□□ 0.49
SNX13-207ENST00000475800 INPP5BP32019 993 aa18.09■□□□□ 0.49
SNX13-207ENST00000475800 GJA5P36382 358 aa18.09■□□□□ 0.49
SNX13-207ENST00000475800 NMIQ13287 307 aaPredicted RBP18.09■□□□□ 0.49
SNX13-207ENST00000475800 ERO1BQ86YB8 467 aa18.09■□□□□ 0.49
SNX13-207ENST00000475800 SCYL3Q8IZE3 742 aa18.09■□□□□ 0.49
SNX13-207ENST00000475800 ZKSCAN4Q969J2 545 aaPredicted RBP18.09■□□□□ 0.49
SNX13-207ENST00000475800 SEC62Q99442 399 aaKnown RBP18.09■□□□□ 0.49
SNX13-207ENST00000475800 PICK1Q9NRD5 415 aa18.09■□□□□ 0.49
SNX13-207ENST00000475800 GINM1Q9NU53 330 aa18.09■□□□□ 0.49
SNX13-207ENST00000475800 SNCAIPQ9Y6H5 919 aa18.09■□□□□ 0.49
SNX13-207ENST00000475800 A0A0D9SFI3 127 aa18.08■□□□□ 0.48
SNX13-207ENST00000475800 SPDYE5A6NIY4 337 aa18.08■□□□□ 0.48
SNX13-207ENST00000475800 APPP05067 770 aa18.08■□□□□ 0.48
SNX13-207ENST00000475800 SBK1Q52WX2 424 aa18.08■□□□□ 0.48
SNX13-207ENST00000475800 RUFY2Q8WXA3 655 aa18.08■□□□□ 0.48
SNX13-207ENST00000475800 CNKSR2Q8WXI2 1034 aa18.08■□□□□ 0.48
SNX13-207ENST00000475800 OPTNQ96CV9 577 aa18.08■□□□□ 0.48
SNX13-207ENST00000475800 FAM227BQ96M60 508 aa18.08■□□□□ 0.48
SNX13-207ENST00000475800 SWAP70Q9UH65 585 aa18.08■□□□□ 0.48
SNX13-207ENST00000475800 TRIM17Q9Y577 477 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms