RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 SLC3A2P08195 630 aaKnown RBP16.29■□□□□ 0.2
UBXN11-214ENST00000475591 RPS8P62241 208 aaKnown RBP16.29■□□□□ 0.2
UBXN11-214ENST00000475591 SPECC1Q5M775 1068 aa16.29■□□□□ 0.2
UBXN11-214ENST00000475591 SLC10A5Q5PT55 438 aa16.29■□□□□ 0.2
UBXN11-214ENST00000475591 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.29■□□□□ 0.2
UBXN11-214ENST00000475591 RNF41Q9H4P4 317 aaPredicted RBP16.29■□□□□ 0.2
UBXN11-214ENST00000475591 BAZ2AQ9UIF9 1905 aaKnown RBP16.29■□□□□ 0.2
UBXN11-214ENST00000475591 hCG_1642624A0A1W2PR95 340 aa16.29■□□□□ 0.2
UBXN11-214ENST00000475591 TOM1O60784 492 aa16.29■□□□□ 0.2
UBXN11-214ENST00000475591 CHAF1AQ13111 956 aaPredicted RBP16.29■□□□□ 0.2
UBXN11-214ENST00000475591 NR5A1Q13285 461 aa16.29■□□□□ 0.2
UBXN11-214ENST00000475591 SEC23AQ15436 765 aa16.29■□□□□ 0.2
UBXN11-214ENST00000475591 SARM1Q6SZW1 724 aa16.29■□□□□ 0.2
UBXN11-214ENST00000475591 TXNRD3Q86VQ6 643 aa16.29■□□□□ 0.2
UBXN11-214ENST00000475591 DIS3L2Q8IYB7 885 aaKnown RBP16.29■□□□□ 0.2
UBXN11-214ENST00000475591 CACTINQ8WUQ7 758 aaKnown RBP16.29■□□□□ 0.2
UBXN11-214ENST00000475591 NID2Q14112 1375 aa16.29■□□□□ 0.2
UBXN11-214ENST00000475591 RPS6KA4O75676 772 aa16.28■□□□□ 0.2
UBXN11-214ENST00000475591 MMP1P03956 469 aa16.28■□□□□ 0.2
UBXN11-214ENST00000475591 TOB1P50616 345 aaPredicted RBP16.28■□□□□ 0.2
UBXN11-214ENST00000475591 FBXO33Q7Z6M2 555 aa16.28■□□□□ 0.2
UBXN11-214ENST00000475591 CRACR2BQ8N4Y2 399 aaPredicted RBP16.28■□□□□ 0.2
UBXN11-214ENST00000475591 FANCBQ8NB91 859 aa16.28■□□□□ 0.2
UBXN11-214ENST00000475591 OXER1Q8TDS5 423 aa16.28■□□□□ 0.2
UBXN11-214ENST00000475591 SHISA4Q96DD7 197 aa16.28■□□□□ 0.2
UBXN11-214ENST00000475591 NLRP3Q96P20 1036 aa16.28■□□□□ 0.2
UBXN11-214ENST00000475591 ZPR1O75312 459 aa16.28■□□□□ 0.2
UBXN11-214ENST00000475591 PRDX5P30044 214 aa16.28■□□□□ 0.2
UBXN11-214ENST00000475591 SYKP43405 635 aa16.28■□□□□ 0.2
UBXN11-214ENST00000475591 MECOMQ03112 1051 aa16.28■□□□□ 0.2
UBXN11-214ENST00000475591 NOSTRINQ8IVI9 506 aa16.28■□□□□ 0.2
UBXN11-214ENST00000475591 ENAHQ8N8S7 591 aaPredicted RBP16.28■□□□□ 0.2
UBXN11-214ENST00000475591 PPP6R2O75170 966 aa16.27■□□□□ 0.2
UBXN11-214ENST00000475591 GRIN1Q05586 938 aa16.27■□□□□ 0.2
UBXN11-214ENST00000475591 SLC4A8Q2Y0W8 1093 aa16.27■□□□□ 0.2
UBXN11-214ENST00000475591 TRIM22Q8IYM9 498 aa16.27■□□□□ 0.2
UBXN11-214ENST00000475591 ESR2Q92731 530 aa16.27■□□□□ 0.2
UBXN11-214ENST00000475591 NSUN4Q96CB9 384 aaKnown RBP16.27■□□□□ 0.2
UBXN11-214ENST00000475591 AATFQ9NY61 560 aaKnown RBP eCLIP16.27■□□□□ 0.2
UBXN11-214ENST00000475591 ANAPC4Q9UJX5 808 aa16.27■□□□□ 0.2
UBXN11-214ENST00000475591 CCNL1Q9UK58 526 aaPredicted RBP16.27■□□□□ 0.2
UBXN11-214ENST00000475591 HPSEQ9Y251 543 aa16.27■□□□□ 0.2
UBXN11-214ENST00000475591 ZNF831Q5JPB2 1677 aa16.27■□□□□ 0.2
UBXN11-214ENST00000475591 CTR9Q6PD62 1173 aa16.27■□□□□ 0.2
UBXN11-214ENST00000475591 TSC1Q92574 1164 aa16.27■□□□□ 0.2
UBXN11-214ENST00000475591 ARHGEF1Q92888 912 aaKnown RBP16.27■□□□□ 0.2
UBXN11-214ENST00000475591 USP17L12C9JPN9 530 aa16.26■□□□□ 0.19
UBXN11-214ENST00000475591 USP17L21D6R901 530 aa16.26■□□□□ 0.19
UBXN11-214ENST00000475591 PNOCQ13519 176 aa16.26■□□□□ 0.19
UBXN11-214ENST00000475591 ZRSR1Q15695 479 aaKnown RBP16.26■□□□□ 0.19
UBXN11-214ENST00000475591 RGS22Q8NE09 1264 aa16.26■□□□□ 0.19
UBXN11-214ENST00000475591 MRFAP1L1Q96HT8 127 aa16.26■□□□□ 0.19
UBXN11-214ENST00000475591 DUOX1Q9NRD9 1551 aa16.26■□□□□ 0.19
UBXN11-214ENST00000475591 ATP2B1P20020 1258 aa16.26■□□□□ 0.19
UBXN11-214ENST00000475591 CDC25BP30305 580 aa16.26■□□□□ 0.19
UBXN11-214ENST00000475591 RESP18Q5W5W9 173 aa16.26■□□□□ 0.19
UBXN11-214ENST00000475591 ZSCAN10Q96SZ4 725 aaPredicted RBP16.26■□□□□ 0.19
UBXN11-214ENST00000475591 NYXQ9GZU5 481 aa16.26■□□□□ 0.19
UBXN11-214ENST00000475591 NAT10Q9H0A0 1025 aaKnown RBP16.26■□□□□ 0.19
UBXN11-214ENST00000475591 BTAF1O14981 1849 aa16.26■□□□□ 0.19
UBXN11-214ENST00000475591 NMT2O60551 498 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 PLEKHA8P1O95397 391 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 DEXIO95424 95 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 CYP2D6P10635 497 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 HIBADHP31937 336 aaKnown RBP16.25■□□□□ 0.19
UBXN11-214ENST00000475591 FILIP1Q7Z7B0 1213 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 WASF1Q92558 559 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 MYH2Q9UKX2 1941 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 EP400Q96L91 3159 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 FAM205CA6NFA0 338 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 UBAP1LF5GYI3 381 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 TM4SF1P30408 202 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 NLRP12P59046 1061 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 LONRF3Q496Y0 759 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 RC3H1Q5TC82 1133 aaKnown RBP16.25■□□□□ 0.19
UBXN11-214ENST00000475591 TMTC2Q8N394 836 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 JMYQ8N9B5 988 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 BRIP1Q9BX63 1249 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 RTCBQ9Y3I0 505 aaKnown RBP16.25■□□□□ 0.19
UBXN11-214ENST00000475591 PCDHB6Q9Y5E3 794 aa16.25■□□□□ 0.19
UBXN11-214ENST00000475591 FOXN1O15353 648 aa16.24■□□□□ 0.19
UBXN11-214ENST00000475591 SAFBQ15424 915 aaKnown RBP eCLIP16.24■□□□□ 0.19
UBXN11-214ENST00000475591 FAM13BQ9NYF5 915 aa16.24■□□□□ 0.19
UBXN11-214ENST00000475591 VPS54Q9P1Q0 977 aa16.24■□□□□ 0.19
UBXN11-214ENST00000475591 NPHP1O15259 732 aa16.24■□□□□ 0.19
UBXN11-214ENST00000475591 IFIT1BQ5T764 474 aaKnown RBP16.24■□□□□ 0.19
UBXN11-214ENST00000475591 TPTE2Q6XPS3 522 aa16.24■□□□□ 0.19
UBXN11-214ENST00000475591 METTL16Q86W50 562 aaKnown RBP16.24■□□□□ 0.19
UBXN11-214ENST00000475591 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.24■□□□□ 0.19
UBXN11-214ENST00000475591 USP21Q9UK80 565 aa16.24■□□□□ 0.19
UBXN11-214ENST00000475591 CCDC196A0A1B0GTZ2 297 aa16.23■□□□□ 0.19
UBXN11-214ENST00000475591 CUTAO60888 179 aa16.23■□□□□ 0.19
UBXN11-214ENST00000475591 NCAPHQ15003 741 aa16.23■□□□□ 0.19
UBXN11-214ENST00000475591 FAM47AQ5JRC9 791 aa16.23■□□□□ 0.19
UBXN11-214ENST00000475591 MTA3Q9BTC8 594 aa16.23■□□□□ 0.19
UBXN11-214ENST00000475591 TNRC6CQ9HCJ0 1690 aaKnown RBP16.23■□□□□ 0.19
UBXN11-214ENST00000475591 HSP90AA2PQ14568 343 aaPredicted RBP16.23■□□□□ 0.19
UBXN11-214ENST00000475591 PKN1Q16512 942 aa16.23■□□□□ 0.19
UBXN11-214ENST00000475591 EARS2Q5JPH6 523 aaKnown RBP16.23■□□□□ 0.19
UBXN11-214ENST00000475591 FOXP4Q8IVH2 680 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms