RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 CDKL5O76039 1030 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 GTF2A1P52655 376 aaPredicted RBP20.21■□□□□ 0.83
CCM2-207ENST00000475551 MORC3Q14149 939 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 POSTNQ15063 836 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 FOXR1Q6PIV2 292 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 LMBR1LQ6UX01 489 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 RASGRP2Q7LDG7 609 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 ACBD3Q9H3P7 528 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 AKAP2Q9Y2D5 859 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 C5P01031 1676 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 CTAGE9A4FU28 777 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 ADAMTS2O95450 1211 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 FGAP02671 866 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 CORO7P57737 925 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 TTC39AQ5SRH9 613 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 RALYLQ86SE5 291 aaKnown RBP20.21■□□□□ 0.83
CCM2-207ENST00000475551 AIFM3Q96NN9 605 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 TEX13AQ9BXU3 409 aaPredicted RBP20.21■□□□□ 0.83
CCM2-207ENST00000475551 VSNL1P62760 191 aa20.2■□□□□ 0.82
CCM2-207ENST00000475551 KIF4BQ2VIQ3 1234 aa20.2■□□□□ 0.82
CCM2-207ENST00000475551 ZNF569Q5MCW4 686 aa20.2■□□□□ 0.82
CCM2-207ENST00000475551 LRRC31Q6UY01 552 aa20.2■□□□□ 0.82
CCM2-207ENST00000475551 KRI1Q8N9T8 703 aaKnown RBP20.2■□□□□ 0.82
CCM2-207ENST00000475551 SUGCTQ9HAC7 445 aa20.2■□□□□ 0.82
CCM2-207ENST00000475551 RGPD5Q99666 1765 aa20.2■□□□□ 0.82
CCM2-207ENST00000475551 IL15P40933 162 aaPredicted RBP20.2■□□□□ 0.82
CCM2-207ENST00000475551 WHAMMP3Q1A5X7 153 aa20.2■□□□□ 0.82
CCM2-207ENST00000475551 PACS2Q86VP3 889 aa20.2■□□□□ 0.82
CCM2-207ENST00000475551 AFDNP55196 1824 aaKnown RBP20.19■□□□□ 0.82
CCM2-207ENST00000475551 CERS3Q8IU89 383 aa20.19■□□□□ 0.82
CCM2-207ENST00000475551 PPM1EQ8WY54 764 aa20.19■□□□□ 0.82
CCM2-207ENST00000475551 SAMSN1Q9NSI8 373 aaKnown RBP20.19■□□□□ 0.82
CCM2-207ENST00000475551 COL18A1P39060 1754 aa20.19■□□□□ 0.82
CCM2-207ENST00000475551 ZFYP08048 801 aaPredicted RBP20.19■□□□□ 0.82
CCM2-207ENST00000475551 ERCC5P28715 1186 aaPredicted RBP20.19■□□□□ 0.82
CCM2-207ENST00000475551 CCDC102AQ96A19 550 aa20.19■□□□□ 0.82
CCM2-207ENST00000475551 ZFP91Q96JP5 570 aaPredicted RBP20.19■□□□□ 0.82
CCM2-207ENST00000475551 MED15Q96RN5 788 aa20.19■□□□□ 0.82
CCM2-207ENST00000475551 CTAGE15A4D2H0 777 aa20.18■□□□□ 0.82
CCM2-207ENST00000475551 CTAGE8P0CG41 777 aa20.18■□□□□ 0.82
CCM2-207ENST00000475551 FOXO4P98177 505 aa20.18■□□□□ 0.82
CCM2-207ENST00000475551 SLC39A6Q13433 755 aa20.18■□□□□ 0.82
CCM2-207ENST00000475551 CTAGE6Q86UF2 777 aa20.18■□□□□ 0.82
CCM2-207ENST00000475551 PPFIBP1Q86W92 1011 aa20.18■□□□□ 0.82
CCM2-207ENST00000475551 CTAGE4Q8IX94 777 aa20.18■□□□□ 0.82
CCM2-207ENST00000475551 TRMT44Q8IYL2 757 aaKnown RBP20.18■□□□□ 0.82
CCM2-207ENST00000475551 TTF2Q9UNY4 1162 aaKnown RBP20.18■□□□□ 0.82
CCM2-207ENST00000475551 JRKLQ9Y4A0 524 aa20.18■□□□□ 0.82
CCM2-207ENST00000475551 WWC2Q6AWC2 1192 aa20.18■□□□□ 0.82
CCM2-207ENST00000475551 WDR93Q6P2C0 686 aa20.18■□□□□ 0.82
CCM2-207ENST00000475551 CPLX2Q6PUV4 134 aaKnown RBP20.18■□□□□ 0.82
CCM2-207ENST00000475551 VIPAS39Q9H9C1 493 aa20.18■□□□□ 0.82
CCM2-207ENST00000475551 GEMIN8Q9NWZ8 242 aaKnown RBP20.18■□□□□ 0.82
CCM2-207ENST00000475551 RHOXF2BP0C7M4 288 aa20.17■□□□□ 0.82
CCM2-207ENST00000475551 PBX1P40424 430 aa20.17■□□□□ 0.82
CCM2-207ENST00000475551 METAP2P50579 478 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCM2-207ENST00000475551 PLCD1P51178 756 aa20.17■□□□□ 0.82
CCM2-207ENST00000475551 RBL2Q08999 1139 aa20.17■□□□□ 0.82
CCM2-207ENST00000475551 CT47A1Q5JQC4 288 aaPredicted RBP20.17■□□□□ 0.82
CCM2-207ENST00000475551 APTXQ7Z2E3 356 aaKnown RBP20.17■□□□□ 0.82
CCM2-207ENST00000475551 RHOXF2Q9BQY4 288 aa20.17■□□□□ 0.82
CCM2-207ENST00000475551 A0A0U1RQJ8 604 aa20.17■□□□□ 0.82
CCM2-207ENST00000475551 ZNF213O14771 459 aa20.17■□□□□ 0.82
CCM2-207ENST00000475551 FECHP22830 423 aa20.17■□□□□ 0.82
CCM2-207ENST00000475551 SLC35F6Q8N357 371 aa20.17■□□□□ 0.82
CCM2-207ENST00000475551 IGSF22Q8N9C0 903 aa20.17■□□□□ 0.82
CCM2-207ENST00000475551 ATRIPQ8WXE1 791 aa20.17■□□□□ 0.82
CCM2-207ENST00000475551 NAPGQ99747 312 aaPredicted RBP20.17■□□□□ 0.82
CCM2-207ENST00000475551 MYO1AQ9UBC5 1043 aa20.17■□□□□ 0.82
CCM2-207ENST00000475551 ANGEL1Q9UNK9 670 aaKnown RBP20.17■□□□□ 0.82
CCM2-207ENST00000475551 ATP5J2-PTCD1G3V325 749 aa20.16■□□□□ 0.82
CCM2-207ENST00000475551 PTCD1O75127 700 aaKnown RBP20.16■□□□□ 0.82
CCM2-207ENST00000475551 PRR29P0C7W0 189 aa20.16■□□□□ 0.82
CCM2-207ENST00000475551 GUCY2CP25092 1073 aa20.16■□□□□ 0.82
CCM2-207ENST00000475551 CCDC51Q96ER9 411 aa20.16■□□□□ 0.82
CCM2-207ENST00000475551 LRRIQ3A6PVS8 624 aaPredicted RBP20.16■□□□□ 0.82
CCM2-207ENST00000475551 TEX33O43247 280 aa20.16■□□□□ 0.82
CCM2-207ENST00000475551 PPFIA4O75335 1185 aa20.16■□□□□ 0.82
CCM2-207ENST00000475551 CPP00450 1065 aa20.16■□□□□ 0.82
CCM2-207ENST00000475551 AARSP49588 968 aaKnown RBP eCLIP20.16■□□□□ 0.82
CCM2-207ENST00000475551 TRIM29Q14134 588 aa20.16■□□□□ 0.82
CCM2-207ENST00000475551 STK11IPQ8N1F8 1099 aa20.16■□□□□ 0.82
CCM2-207ENST00000475551 MFAP3LO75121 409 aa20.15■□□□□ 0.82
CCM2-207ENST00000475551 TRDNQ13061 729 aa20.15■□□□□ 0.82
CCM2-207ENST00000475551 WASHC4Q2M389 1173 aa20.15■□□□□ 0.82
CCM2-207ENST00000475551 SLC9C2Q5TAH2 1124 aa20.15■□□□□ 0.82
CCM2-207ENST00000475551 KANK3Q6NY19 840 aa20.15■□□□□ 0.82
CCM2-207ENST00000475551 SPATA20Q8TB22 786 aa20.15■□□□□ 0.82
CCM2-207ENST00000475551 FBXO41Q8TF61 875 aa20.15■□□□□ 0.82
CCM2-207ENST00000475551 FAM204AQ9H8W3 233 aa20.15■□□□□ 0.82
CCM2-207ENST00000475551 SLC52A2Q9HAB3 445 aa20.15■□□□□ 0.82
CCM2-207ENST00000475551 SERTAD1Q9UHV2 236 aa20.15■□□□□ 0.82
CCM2-207ENST00000475551 CAMTA1Q9Y6Y1 1673 aa20.15■□□□□ 0.82
CCM2-207ENST00000475551 H7C1W4 665 aa20.15■□□□□ 0.82
CCM2-207ENST00000475551 ZNF827Q17R98 1081 aa20.15■□□□□ 0.82
CCM2-207ENST00000475551 CTCFLQ8NI51 663 aaPredicted RBP20.15■□□□□ 0.82
CCM2-207ENST00000475551 EYA2O00167 538 aa20.14■□□□□ 0.82
CCM2-207ENST00000475551 POLR2DO15514 142 aaKnown RBP20.14■□□□□ 0.82
CCM2-207ENST00000475551 PTPREP23469 700 aa20.14■□□□□ 0.82
CCM2-207ENST00000475551 EFCAB13Q8IY85 973 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms