RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 LDHCP07864 332 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 IL1R1P14778 569 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 USP5P45974 858 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 MAP3K11Q16584 847 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 SBK1Q52WX2 424 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 KRT40Q6A162 431 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 TRIM22Q8IYM9 498 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 FANCBQ8NB91 859 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 MCM9Q9NXL9 1143 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 MYH2Q9UKX2 1941 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 NR1I2O75469 434 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 ME1P48163 572 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 GNL2Q13823 731 aaKnown RBP17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 MYSM1Q5VVJ2 828 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 ENAHQ8N8S7 591 aaPredicted RBP17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 KIF28PB7ZC32 967 aa17.85■□□□□ 0.45
RPUSD3-215ENST00000475470 ORC4O43929 436 aa17.85■□□□□ 0.45
RPUSD3-215ENST00000475470 DIXDC1Q155Q3 683 aa17.85■□□□□ 0.45
RPUSD3-215ENST00000475470 GRIK5Q16478 980 aa17.85■□□□□ 0.45
RPUSD3-215ENST00000475470 IFIT1BQ5T764 474 aaKnown RBP17.85■□□□□ 0.45
RPUSD3-215ENST00000475470 SP8Q8IXZ3 490 aa17.85■□□□□ 0.45
RPUSD3-215ENST00000475470 FUCA2Q9BTY2 467 aa17.85■□□□□ 0.45
RPUSD3-215ENST00000475470 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.85■□□□□ 0.45
RPUSD3-215ENST00000475470 KIAA1551Q9HCM1 1747 aa17.85■□□□□ 0.45
RPUSD3-215ENST00000475470 CCDC192P0DO97 292 aa17.84■□□□□ 0.45
RPUSD3-215ENST00000475470 CYP2D6P10635 497 aa17.84■□□□□ 0.45
RPUSD3-215ENST00000475470 PDE4BQ07343 736 aa17.84■□□□□ 0.45
RPUSD3-215ENST00000475470 CCAR1Q8IX12 1150 aaKnown RBP17.84■□□□□ 0.45
RPUSD3-215ENST00000475470 FAM43AQ8N2R8 423 aa17.84■□□□□ 0.45
RPUSD3-215ENST00000475470 SH3RF3Q8TEJ3 882 aaPredicted RBP17.84■□□□□ 0.45
RPUSD3-215ENST00000475470 CLSTN2Q9H4D0 955 aa17.84■□□□□ 0.45
RPUSD3-215ENST00000475470 EVX2Q03828 476 aa17.84■□□□□ 0.45
RPUSD3-215ENST00000475470 STK38Q15208 465 aa17.84■□□□□ 0.45
RPUSD3-215ENST00000475470 PPP2R5BQ15173 497 aa17.83■□□□□ 0.45
RPUSD3-215ENST00000475470 SF3A1Q15459 793 aaKnown RBP17.83■□□□□ 0.45
RPUSD3-215ENST00000475470 CATIPQ7Z7H3 387 aa17.83■□□□□ 0.45
RPUSD3-215ENST00000475470 CCDC82Q8N4S0 544 aa17.83■□□□□ 0.45
RPUSD3-215ENST00000475470 POLR3EQ9NVU0 708 aa17.83■□□□□ 0.45
RPUSD3-215ENST00000475470 ATP6V0A2Q9Y487 856 aa17.83■□□□□ 0.45
RPUSD3-215ENST00000475470 CLIC4Q9Y696 253 aa17.83■□□□□ 0.45
RPUSD3-215ENST00000475470 PARP3Q9Y6F1 533 aa17.83■□□□□ 0.45
RPUSD3-215ENST00000475470 LAMB1P07942 1786 aa17.83■□□□□ 0.45
RPUSD3-215ENST00000475470 MROH7-TTC4A0A0A0MT08 1334 aa17.83■□□□□ 0.44
RPUSD3-215ENST00000475470 USP17L8P0C7I0 530 aa17.83■□□□□ 0.44
RPUSD3-215ENST00000475470 SRGNP10124 158 aa17.83■□□□□ 0.44
RPUSD3-215ENST00000475470 UVSSAQ2YD98 709 aa17.83■□□□□ 0.44
RPUSD3-215ENST00000475470 CCDC73Q6ZRK6 1079 aa17.83■□□□□ 0.44
RPUSD3-215ENST00000475470 CRACR2BQ8N4Y2 399 aaPredicted RBP17.83■□□□□ 0.44
RPUSD3-215ENST00000475470 LINC00301Q8NCQ3 95 aa17.83■□□□□ 0.44
RPUSD3-215ENST00000475470 UBE2Q2LH0YL09 131 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 YEATS4O95619 227 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 MMP10P09238 476 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 NPR1P16066 1061 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 PPP4CP60510 307 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 CMTR1Q8N1G2 835 aaKnown RBP17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 KCNG4Q8TDN1 519 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 ECM29Q5VYK3 1845 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 ANKRD31Q8N7Z5 1873 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 DEXIO95424 95 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 PDE6BP35913 854 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 SLC4A8Q2Y0W8 1093 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 FAM47AQ5JRC9 791 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 NBPF11Q86T75 865 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 AMOTL1Q8IY63 956 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 CKAP2LQ8IYA6 745 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 PCDHA7Q9UN72 937 aa17.82■□□□□ 0.44
RPUSD3-215ENST00000475470 CALM1P0DP23 149 aa17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 CALM2P0DP24 149 aa17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 CALM3P0DP25 149 aa17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 MFSD14BQ5SR56 506 aa17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 ANO1Q5XXA6 986 aa17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 CERS3Q8IU89 383 aa17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 TBC1D22AQ8WUA7 517 aa17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 MKRN1Q9UHC7 482 aaKnown RBP17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 TSPY2A6NKD2 308 aa17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 ALDH1B1P30837 517 aa17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 GUCY1A2P33402 732 aa17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 C12orf60Q5U649 245 aa17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 TGFBRAP1Q8WUH2 860 aa17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 PDLIM2Q96JY6 352 aa17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 RTFDC1Q9BY42 306 aaPredicted RBP17.81■□□□□ 0.44
RPUSD3-215ENST00000475470 RIMBP2O15034 1052 aa17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 SPTLC2O15270 562 aa17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 AKAP17AQ02040 695 aaKnown RBP17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 SAFBQ15424 915 aaKnown RBP eCLIP17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 ADALQ6DHV7 355 aa17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 GOLPH3LQ9H4A5 285 aa17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 LRRC37AA6NMS7 1700 aa17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 NRXN2Q9P2S2 1712 aa17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 U2AF2P26368 475 aaKnown RBP eCLIP17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 BTDP43251 543 aa17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 RBM43Q6ZSC3 357 aaKnown RBP17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 SLF2Q8IX21 1173 aa17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 FSIP1Q8NA03 581 aa17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 TMX4Q9H1E5 349 aaPredicted RBP17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 RBM28Q9NW13 759 aaKnown RBP17.8■□□□□ 0.44
RPUSD3-215ENST00000475470 DDAH1O94760 285 aa17.79■□□□□ 0.44
RPUSD3-215ENST00000475470 TYRO3Q06418 890 aa17.79■□□□□ 0.44
RPUSD3-215ENST00000475470 MSL1Q68DK7 614 aa17.79■□□□□ 0.44
RPUSD3-215ENST00000475470 MPNDQ8N594 471 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms