RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 CNOT7Q9UIV1 285 aaKnown RBP11.38□□□□□ -0.59
DDX39B-217ENST00000474961 PCDHAC2Q9Y5I4 1007 aa11.38□□□□□ -0.59
DDX39B-217ENST00000474961 SLC4A4Q9Y6R1 1079 aa11.38□□□□□ -0.59
DDX39B-217ENST00000474961 NAV1Q8NEY1 1877 aa11.38□□□□□ -0.59
DDX39B-217ENST00000474961 ZC3H4Q9UPT8 1303 aaKnown RBP11.37□□□□□ -0.59
DDX39B-217ENST00000474961 GSG1L2A8MUP6 293 aa11.37□□□□□ -0.59
DDX39B-217ENST00000474961 FOXP2O15409 715 aa11.37□□□□□ -0.59
DDX39B-217ENST00000474961 EPB41L2O43491 1005 aaKnown RBP11.37□□□□□ -0.59
DDX39B-217ENST00000474961 RHBDL3P58872 404 aa11.37□□□□□ -0.59
DDX39B-217ENST00000474961 DLGAP5Q15398 846 aa11.37□□□□□ -0.59
DDX39B-217ENST00000474961 MTMR14Q8NCE2 650 aa11.37□□□□□ -0.59
DDX39B-217ENST00000474961 CRNKL1Q9BZJ0 848 aaKnown RBP11.37□□□□□ -0.59
DDX39B-217ENST00000474961 UPF2Q9HAU5 1272 aaKnown RBP11.37□□□□□ -0.59
DDX39B-217ENST00000474961 USP40Q9NVE5 1235 aa11.37□□□□□ -0.59
DDX39B-217ENST00000474961 APPP05067 770 aa11.36□□□□□ -0.59
DDX39B-217ENST00000474961 ALX1Q15699 326 aa11.36□□□□□ -0.59
DDX39B-217ENST00000474961 CDC42EP5Q6NZY7 148 aa11.36□□□□□ -0.59
DDX39B-217ENST00000474961 TEX11Q8IYF3 940 aa11.36□□□□□ -0.59
DDX39B-217ENST00000474961 IFNL3Q8IZI9 196 aa11.36□□□□□ -0.59
DDX39B-217ENST00000474961 SDR42E1Q8WUS8 393 aa11.36□□□□□ -0.59
DDX39B-217ENST00000474961 ZBED3Q96IU2 234 aaPredicted RBP11.36□□□□□ -0.59
DDX39B-217ENST00000474961 PRMT6Q96LA8 375 aaPredicted RBP11.36□□□□□ -0.59
DDX39B-217ENST00000474961 MYOZ2Q9NPC6 264 aa11.36□□□□□ -0.59
DDX39B-217ENST00000474961 RBM8AQ9Y5S9 174 aaKnown RBP11.36□□□□□ -0.59
DDX39B-217ENST00000474961 LAMA4Q16363 1823 aa11.36□□□□□ -0.59
DDX39B-217ENST00000474961 RPAP1Q9BWH6 1393 aaPredicted RBP11.36□□□□□ -0.59
DDX39B-217ENST00000474961 POLR2AP24928 1970 aaKnown RBP11.36□□□□□ -0.59
DDX39B-217ENST00000474961 GLTPD2A6NH11 291 aa11.35□□□□□ -0.59
DDX39B-217ENST00000474961 H7C1D1 291 aa11.35□□□□□ -0.59
DDX39B-217ENST00000474961 FGAP02671 866 aa11.35□□□□□ -0.59
DDX39B-217ENST00000474961 USP5P45974 858 aa11.35□□□□□ -0.59
DDX39B-217ENST00000474961 RBM26Q5T8P6 1007 aaKnown RBP11.35□□□□□ -0.59
DDX39B-217ENST00000474961 TGFBRAP1Q8WUH2 860 aa11.35□□□□□ -0.59
DDX39B-217ENST00000474961 C22orf23Q9BZE7 217 aa11.35□□□□□ -0.59
DDX39B-217ENST00000474961 TDRD3Q9H7E2 651 aaKnown RBP11.35□□□□□ -0.59
DDX39B-217ENST00000474961 EPB41L4AQ9HCS5 686 aaPredicted RBP11.35□□□□□ -0.59
DDX39B-217ENST00000474961 GPRC5DQ9NZD1 345 aa11.35□□□□□ -0.59
DDX39B-217ENST00000474961 LAMB1P07942 1786 aa11.35□□□□□ -0.59
DDX39B-217ENST00000474961 SCN4AP35499 1836 aa11.35□□□□□ -0.59
DDX39B-217ENST00000474961 WDHD1O75717 1129 aaPredicted RBP11.34□□□□□ -0.59
DDX39B-217ENST00000474961 EGFRP00533 1210 aa11.34□□□□□ -0.59
DDX39B-217ENST00000474961 MCCP23508 829 aa11.34□□□□□ -0.59
DDX39B-217ENST00000474961 HSPA4P34932 840 aa11.34□□□□□ -0.59
DDX39B-217ENST00000474961 EPS15P42566 896 aa11.34□□□□□ -0.59
DDX39B-217ENST00000474961 NECTIN1Q15223 517 aa11.34□□□□□ -0.59
DDX39B-217ENST00000474961 TBC1D10BQ4KMP7 808 aaPredicted RBP11.34□□□□□ -0.59
DDX39B-217ENST00000474961 GIMAP6Q6P9H5 292 aa11.34□□□□□ -0.59
DDX39B-217ENST00000474961 SAMD7Q7Z3H4 446 aa11.34□□□□□ -0.59
DDX39B-217ENST00000474961 TBC1D32Q96NH3 1257 aa11.34□□□□□ -0.59
DDX39B-217ENST00000474961 NACAP1Q9BZK3 213 aa11.34□□□□□ -0.59
DDX39B-217ENST00000474961 NAPBQ9H115 298 aa11.34□□□□□ -0.59
DDX39B-217ENST00000474961 DCP1AQ9NPI6 582 aaPredicted RBP11.34□□□□□ -0.59
DDX39B-217ENST00000474961 ATP8A2Q9NTI2 1148 aa11.34□□□□□ -0.59
DDX39B-217ENST00000474961 CTNNA3Q9UI47 895 aa11.34□□□□□ -0.59
DDX39B-217ENST00000474961 DDX60LQ5H9U9 1706 aaKnown RBP11.34□□□□□ -0.59
DDX39B-217ENST00000474961 WDR90Q96KV7 1748 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 POTEB3A0JP26 581 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 CLRN2A0PK11 232 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 WNT10BO00744 389 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 SLC27A2O14975 620 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 LMOD1P29536 600 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-217ENST00000474961 TDO2P48775 406 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 FOSBP53539 338 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 CACNB3P54284 484 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 KIF4BQ2VIQ3 1234 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 NBPF9Q3BBW0 867 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 CREB3L3Q68CJ9 461 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 POTEBQ6S5H4 581 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 MAPKAPK5Q8IW41 473 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 DDRGK1Q96HY6 314 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 EPAS1Q99814 870 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 ZNF70Q9UC06 446 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-217ENST00000474961 MKRN1Q9UHC7 482 aaKnown RBP11.33□□□□□ -0.6
DDX39B-217ENST00000474961 ZMYM6O95789 1325 aa11.33□□□□□ -0.6
DDX39B-217ENST00000474961 MYO1BO43795 1136 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 PBX2P40425 430 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 RBM25P49756 843 aaKnown RBP11.32□□□□□ -0.6
DDX39B-217ENST00000474961 NFIAQ12857 509 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 PICALMQ13492 652 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 RNF20Q5VTR2 975 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 CTR9Q6PD62 1173 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 TRPM4Q8TD43 1214 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 KCNB2Q92953 911 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 ZDHHC16Q969W1 377 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 IDI2Q9BXS1 227 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 DDX4Q9NQI0 724 aaKnown RBP11.32□□□□□ -0.6
DDX39B-217ENST00000474961 ADARB2Q9NS39 739 aaKnown RBP11.32□□□□□ -0.6
DDX39B-217ENST00000474961 TMOD2Q9NZR1 351 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 FAM198AQ9UFP1 575 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 SAP30BPQ9UHR5 308 aaKnown RBP11.32□□□□□ -0.6
DDX39B-217ENST00000474961 PALD1Q9ULE6 856 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 FLT1P17948 1338 aa11.32□□□□□ -0.6
DDX39B-217ENST00000474961 MINDY4BA8MYZ0 360 aa11.31□□□□□ -0.6
DDX39B-217ENST00000474961 USP17L12C9JPN9 530 aa11.31□□□□□ -0.6
DDX39B-217ENST00000474961 USP17L21D6R901 530 aa11.31□□□□□ -0.6
DDX39B-217ENST00000474961 ZNF213O14771 459 aa11.31□□□□□ -0.6
DDX39B-217ENST00000474961 CYP21A2P08686 494 aa11.31□□□□□ -0.6
DDX39B-217ENST00000474961 HIRAP54198 1017 aaPredicted RBP11.31□□□□□ -0.6
DDX39B-217ENST00000474961 HAND2P61296 217 aa11.31□□□□□ -0.6
DDX39B-217ENST00000474961 IMMTQ16891 758 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms