RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 Q6ZUG5 572 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 NOL8Q76FK4 1167 aaKnown RBP24.06■■□□□ 1.44
CDHR3-210ENST00000474330 MAPKAPK5Q8IW41 473 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 MICALL2Q8IY33 904 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 FLT1P17948 1338 aa24.05■■□□□ 1.44
CDHR3-210ENST00000474330 RBM5P52756 815 aaKnown RBP eCLIP24.05■■□□□ 1.44
CDHR3-210ENST00000474330 TRPM4Q8TD43 1214 aa24.05■■□□□ 1.44
CDHR3-210ENST00000474330 ZSCAN31Q96LW9 406 aaPredicted RBP24.05■■□□□ 1.44
CDHR3-210ENST00000474330 WDHD1O75717 1129 aaPredicted RBP24.04■■□□□ 1.44
CDHR3-210ENST00000474330 EGFRP00533 1210 aa24.04■■□□□ 1.44
CDHR3-210ENST00000474330 MMP14P50281 582 aa24.04■■□□□ 1.44
CDHR3-210ENST00000474330 CUL4AQ13619 759 aa24.04■■□□□ 1.44
CDHR3-210ENST00000474330 CFAP100Q494V2 611 aa24.04■■□□□ 1.44
CDHR3-210ENST00000474330 AMOTL1Q8IY63 956 aa24.04■■□□□ 1.44
CDHR3-210ENST00000474330 INCENPQ9NQS7 918 aa24.04■■□□□ 1.44
CDHR3-210ENST00000474330 B4E1Z4 1266 aa24.03■■□□□ 1.44
CDHR3-210ENST00000474330 SMIM22K7EJ46 135 aa24.03■■□□□ 1.44
CDHR3-210ENST00000474330 SLC3A2P08195 630 aaKnown RBP24.03■■□□□ 1.44
CDHR3-210ENST00000474330 SAMD7Q7Z3H4 446 aa24.03■■□□□ 1.44
CDHR3-210ENST00000474330 PGAP2Q9UHJ9 254 aa24.03■■□□□ 1.44
CDHR3-210ENST00000474330 PCDHAC2Q9Y5I4 1007 aa24.03■■□□□ 1.44
CDHR3-210ENST00000474330 POLR2AP24928 1970 aaKnown RBP24.03■■□□□ 1.44
CDHR3-210ENST00000474330 H7C1D1 291 aa24.02■■□□□ 1.44
CDHR3-210ENST00000474330 PRC1O43663 620 aa24.02■■□□□ 1.44
CDHR3-210ENST00000474330 HSP90AA1P07900 732 aaKnown RBP24.02■■□□□ 1.44
CDHR3-210ENST00000474330 CYP2D6P10635 497 aa24.02■■□□□ 1.44
CDHR3-210ENST00000474330 ANTXR2P58335 489 aa24.02■■□□□ 1.44
CDHR3-210ENST00000474330 CHST3Q7LGC8 479 aa24.02■■□□□ 1.44
CDHR3-210ENST00000474330 SPRYD3Q8NCJ5 442 aa24.02■■□□□ 1.44
CDHR3-210ENST00000474330 LARP6Q9BRS8 491 aaKnown RBP24.02■■□□□ 1.44
CDHR3-210ENST00000474330 FGD1P98174 961 aa24.02■■□□□ 1.44
CDHR3-210ENST00000474330 CYB5R4Q7L1T6 521 aa24.02■■□□□ 1.44
CDHR3-210ENST00000474330 NKX2-3Q8TAU0 364 aa24.02■■□□□ 1.44
CDHR3-210ENST00000474330 LRRC2Q9BYS8 371 aa24.02■■□□□ 1.44
CDHR3-210ENST00000474330 SH2B1Q9NRF2 756 aaPredicted RBP24.02■■□□□ 1.44
CDHR3-210ENST00000474330 TPCN1Q9ULQ1 816 aa24.02■■□□□ 1.44
CDHR3-210ENST00000474330 ROBO3Q96MS0 1386 aa24.02■■□□□ 1.44
CDHR3-210ENST00000474330 POLR3DP05423 398 aaPredicted RBP24.01■■□□□ 1.43
CDHR3-210ENST00000474330 IDI2Q9BXS1 227 aa24.01■■□□□ 1.43
CDHR3-210ENST00000474330 ZSWIM5Q9P217 1185 aa24.01■■□□□ 1.43
CDHR3-210ENST00000474330 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.01■■□□□ 1.43
CDHR3-210ENST00000474330 ORC4O43929 436 aa24■■□□□ 1.43
CDHR3-210ENST00000474330 KDM4AO75164 1064 aa24■■□□□ 1.43
CDHR3-210ENST00000474330 NPM3O75607 178 aaKnown RBP24■■□□□ 1.43
CDHR3-210ENST00000474330 EVX2Q03828 476 aa24■■□□□ 1.43
CDHR3-210ENST00000474330 FMR1Q06787 632 aaKnown RBP eCLIP24■■□□□ 1.43
CDHR3-210ENST00000474330 STK11IPQ8N1F8 1099 aa24■■□□□ 1.43
CDHR3-210ENST00000474330 MTMR14Q8NCE2 650 aa24■■□□□ 1.43
CDHR3-210ENST00000474330 BRF1Q92994 677 aa24■■□□□ 1.43
CDHR3-210ENST00000474330 INTS4Q96HW7 963 aaKnown RBP24■■□□□ 1.43
CDHR3-210ENST00000474330 PRMT6Q96LA8 375 aaPredicted RBP24■■□□□ 1.43
CDHR3-210ENST00000474330 DDX4Q9NQI0 724 aaKnown RBP24■■□□□ 1.43
CDHR3-210ENST00000474330 TOMM22Q9NS69 142 aa24■■□□□ 1.43
CDHR3-210ENST00000474330 SAP30BPQ9UHR5 308 aaKnown RBP24■■□□□ 1.43
CDHR3-210ENST00000474330 NT5C2P49902 561 aa23.99■■□□□ 1.43
CDHR3-210ENST00000474330 ZNF280AP59817 542 aaPredicted RBP23.99■■□□□ 1.43
CDHR3-210ENST00000474330 PDE4BQ07343 736 aa23.99■■□□□ 1.43
CDHR3-210ENST00000474330 PICALMQ13492 652 aa23.99■■□□□ 1.43
CDHR3-210ENST00000474330 ME3Q16798 604 aa23.99■■□□□ 1.43
CDHR3-210ENST00000474330 RRP12Q5JTH9 1297 aaKnown RBP23.99■■□□□ 1.43
CDHR3-210ENST00000474330 ESR2Q92731 530 aa23.99■■□□□ 1.43
CDHR3-210ENST00000474330 TMEM87BQ96K49 555 aa23.99■■□□□ 1.43
CDHR3-210ENST00000474330 MTA3Q9BTC8 594 aa23.99■■□□□ 1.43
CDHR3-210ENST00000474330 SPDYE2BA6NHP3 402 aa23.99■■□□□ 1.43
CDHR3-210ENST00000474330 LARGE1O95461 756 aa23.99■■□□□ 1.43
CDHR3-210ENST00000474330 SPDYE6P0CI01 402 aa23.99■■□□□ 1.43
CDHR3-210ENST00000474330 PLCD1P51178 756 aa23.99■■□□□ 1.43
CDHR3-210ENST00000474330 DLGAP5Q15398 846 aa23.99■■□□□ 1.43
CDHR3-210ENST00000474330 TBC1D10BQ4KMP7 808 aaPredicted RBP23.99■■□□□ 1.43
CDHR3-210ENST00000474330 ZC3H15Q8WU90 426 aaKnown RBP23.99■■□□□ 1.43
CDHR3-210ENST00000474330 OSBPL5Q9H0X9 879 aaPredicted RBP23.99■■□□□ 1.43
CDHR3-210ENST00000474330 MYOZ2Q9NPC6 264 aa23.99■■□□□ 1.43
CDHR3-210ENST00000474330 EVCP57679 992 aa23.98■■□□□ 1.43
CDHR3-210ENST00000474330 SLKQ9H2G2 1235 aaPredicted RBP23.98■■□□□ 1.43
CDHR3-210ENST00000474330 TDRD3Q9H7E2 651 aaKnown RBP23.98■■□□□ 1.43
CDHR3-210ENST00000474330 NFIAQ12857 509 aa23.97■■□□□ 1.43
CDHR3-210ENST00000474330 SLC4A8Q2Y0W8 1093 aa23.97■■□□□ 1.43
CDHR3-210ENST00000474330 TTC6Q86TZ1 520 aa23.97■■□□□ 1.43
CDHR3-210ENST00000474330 CREBZFQ9NS37 354 aa23.97■■□□□ 1.43
CDHR3-210ENST00000474330 TRPM7Q96QT4 1865 aa23.97■■□□□ 1.43
CDHR3-210ENST00000474330 TRAF5O00463 557 aa23.96■■□□□ 1.43
CDHR3-210ENST00000474330 RBM26Q5T8P6 1007 aaKnown RBP23.96■■□□□ 1.43
CDHR3-210ENST00000474330 IGDCC4Q8TDY8 1250 aa23.96■■□□□ 1.43
CDHR3-210ENST00000474330 FOXD4L1Q9NU39 408 aa23.96■■□□□ 1.43
CDHR3-210ENST00000474330 ANGEL1Q9UNK9 670 aaKnown RBP23.96■■□□□ 1.43
CDHR3-210ENST00000474330 SH2B2O14492 632 aaPredicted RBP23.95■■□□□ 1.43
CDHR3-210ENST00000474330 DDIT3P35638 169 aa23.95■■□□□ 1.43
CDHR3-210ENST00000474330 APOBRQ0VD83 1088 aa23.95■■□□□ 1.43
CDHR3-210ENST00000474330 KLRG1Q96E93 195 aa23.95■■□□□ 1.43
CDHR3-210ENST00000474330 DYNLL2Q96FJ2 89 aa23.95■■□□□ 1.43
CDHR3-210ENST00000474330 ZNF274Q96GC6 653 aaPredicted RBP23.95■■□□□ 1.43
CDHR3-210ENST00000474330 ZBED3Q96IU2 234 aaPredicted RBP23.95■■□□□ 1.43
CDHR3-210ENST00000474330 GPHNQ9NQX3 736 aaPredicted RBP23.95■■□□□ 1.43
CDHR3-210ENST00000474330 FAM198AQ9UFP1 575 aa23.95■■□□□ 1.43
CDHR3-210ENST00000474330 PRDM1O75626 825 aa23.95■■□□□ 1.42
CDHR3-210ENST00000474330 C16orf86Q6ZW13 317 aa23.95■■□□□ 1.42
CDHR3-210ENST00000474330 ZNF287Q9HBT7 754 aa23.95■■□□□ 1.42
CDHR3-210ENST00000474330 CWC22Q9HCG8 908 aaKnown RBP23.95■■□□□ 1.42
CDHR3-210ENST00000474330 RANBP6O60518 1105 aaKnown RBP23.94■■□□□ 1.42
CDHR3-210ENST00000474330 ENTPD3O75355 529 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms