RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 PLCG2P16885 1265 aa13.56□□□□□ -0.24
SEMA4D-216ENST00000474258 CTGFP29279 349 aa13.56□□□□□ -0.24
SEMA4D-216ENST00000474258 SH3TC2Q8TF17 1288 aa13.56□□□□□ -0.24
SEMA4D-216ENST00000474258 ZNF512BQ96KM6 892 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-216ENST00000474258 TRIM47Q96LD4 638 aa13.56□□□□□ -0.24
SEMA4D-216ENST00000474258 SIPA1L1O43166 1804 aa13.55□□□□□ -0.24
SEMA4D-216ENST00000474258 TRIM75PA6NK02 468 aa13.55□□□□□ -0.24
SEMA4D-216ENST00000474258 OSBPP22059 807 aa13.55□□□□□ -0.24
SEMA4D-216ENST00000474258 FCGRTP55899 365 aa13.55□□□□□ -0.24
SEMA4D-216ENST00000474258 PPP4CP60510 307 aa13.55□□□□□ -0.24
SEMA4D-216ENST00000474258 RAET1EQ8TD07 263 aa13.55□□□□□ -0.24
SEMA4D-216ENST00000474258 SH3RF3Q8TEJ3 882 aaPredicted RBP13.55□□□□□ -0.24
SEMA4D-216ENST00000474258 TBC1D2Q9BYX2 928 aa13.55□□□□□ -0.24
SEMA4D-216ENST00000474258 DHX36Q9H2U1 1008 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-216ENST00000474258 AATFQ9NY61 560 aaKnown RBP eCLIP13.55□□□□□ -0.24
SEMA4D-216ENST00000474258 PI4KBQ9UBF8 816 aa13.55□□□□□ -0.24
SEMA4D-216ENST00000474258 MKI67P46013 3256 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-216ENST00000474258 LOC285556D6RIA3 1793 aa13.54□□□□□ -0.24
SEMA4D-216ENST00000474258 FAM196BA6NMK8 535 aa13.54□□□□□ -0.24
SEMA4D-216ENST00000474258 MYCP01106 439 aaPredicted RBP13.54□□□□□ -0.24
SEMA4D-216ENST00000474258 CYP2E1P05181 493 aaPredicted RBP13.54□□□□□ -0.24
SEMA4D-216ENST00000474258 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.54□□□□□ -0.24
SEMA4D-216ENST00000474258 HERC5Q9UII4 1024 aaKnown RBP13.54□□□□□ -0.24
SEMA4D-216ENST00000474258 AGTPBP1Q9UPW5 1226 aa13.54□□□□□ -0.24
SEMA4D-216ENST00000474258 BRCA2P51587 3418 aa13.54□□□□□ -0.24
SEMA4D-216ENST00000474258 MYPNQ86TC9 1320 aa13.54□□□□□ -0.24
SEMA4D-216ENST00000474258 GRK4P32298 578 aa13.53□□□□□ -0.24
SEMA4D-216ENST00000474258 CAP2P40123 477 aa13.53□□□□□ -0.24
SEMA4D-216ENST00000474258 ZAP70P43403 619 aa13.53□□□□□ -0.24
SEMA4D-216ENST00000474258 CEP85Q6P2H3 762 aa13.53□□□□□ -0.24
SEMA4D-216ENST00000474258 CCDC84Q86UT8 332 aaPredicted RBP13.53□□□□□ -0.24
SEMA4D-216ENST00000474258 PROCA1Q8NCQ7 364 aaPredicted RBP13.53□□□□□ -0.24
SEMA4D-216ENST00000474258 ZNF280CQ8ND82 737 aa13.53□□□□□ -0.24
SEMA4D-216ENST00000474258 SMCR8Q8TEV9 937 aaPredicted RBP13.53□□□□□ -0.24
SEMA4D-216ENST00000474258 TGFBRAP1Q8WUH2 860 aa13.53□□□□□ -0.24
SEMA4D-216ENST00000474258 EAF2Q96CJ1 260 aaPredicted RBP13.53□□□□□ -0.24
SEMA4D-216ENST00000474258 GCC1Q96CN9 775 aa13.53□□□□□ -0.24
SEMA4D-216ENST00000474258 CCDC8Q9H0W5 538 aaPredicted RBP13.53□□□□□ -0.24
SEMA4D-216ENST00000474258 DBNLQ9UJU6 430 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-216ENST00000474258 USP17L5A8MUK1 530 aa13.52□□□□□ -0.25
SEMA4D-216ENST00000474258 MS4A1P11836 297 aa13.52□□□□□ -0.25
SEMA4D-216ENST00000474258 SPP2Q13103 211 aa13.52□□□□□ -0.25
SEMA4D-216ENST00000474258 ERC1Q8IUD2 1116 aa13.52□□□□□ -0.25
SEMA4D-216ENST00000474258 FOXP4Q8IVH2 680 aaPredicted RBP13.52□□□□□ -0.25
SEMA4D-216ENST00000474258 AS3MTQ9HBK9 375 aa13.52□□□□□ -0.25
SEMA4D-216ENST00000474258 PNMA3Q9UL41 463 aa13.52□□□□□ -0.25
SEMA4D-216ENST00000474258 PRKCZQ05513 592 aa13.51□□□□□ -0.25
SEMA4D-216ENST00000474258 PABPC4Q13310 644 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEMA4D-216ENST00000474258 RRP1BQ14684 758 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-216ENST00000474258 MTFR1Q15390 333 aa13.51□□□□□ -0.25
SEMA4D-216ENST00000474258 HSP90AB4PQ58FF6 505 aa13.51□□□□□ -0.25
SEMA4D-216ENST00000474258 ADGRA1Q86SQ6 560 aa13.51□□□□□ -0.25
SEMA4D-216ENST00000474258 METTL16Q86W50 562 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-216ENST00000474258 MAPKAPK5Q8IW41 473 aa13.51□□□□□ -0.25
SEMA4D-216ENST00000474258 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
SEMA4D-216ENST00000474258 PIH1D3Q9NQM4 214 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-216ENST00000474258 TLR7Q9NYK1 1049 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-216ENST00000474258 BIN2Q9UBW5 565 aaPredicted RBP13.51□□□□□ -0.25
SEMA4D-216ENST00000474258 FLT1P17948 1338 aa13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 TNPO2O14787 897 aaKnown RBP13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 IDH1O75874 414 aaKnown RBP13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 ASNSP08243 561 aa13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 CYP7A1P22680 504 aa13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 HMGCS2P54868 508 aa13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 UBXN2AP68543 259 aa13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 SH3D19Q5HYK7 790 aa13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 TREML2Q5T2D2 321 aa13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 CRACR2BQ8N4Y2 399 aaPredicted RBP13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 ANKRD13CQ8N6S4 541 aa13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 NKX2-3Q8TAU0 364 aa13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 TRIM34Q9BYJ4 488 aa13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 GABRQQ9UN88 632 aa13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 EXOC6BQ9Y2D4 811 aa13.5□□□□□ -0.25
SEMA4D-216ENST00000474258 GCLCP48506 637 aaPredicted RBP13.49□□□□□ -0.25
SEMA4D-216ENST00000474258 DYNLL1P63167 89 aaKnown RBP13.49□□□□□ -0.25
SEMA4D-216ENST00000474258 FAM110CQ1W6H9 321 aa13.49□□□□□ -0.25
SEMA4D-216ENST00000474258 TMED8Q6PL24 325 aaPredicted RBP13.49□□□□□ -0.25
SEMA4D-216ENST00000474258 AACSQ86V21 672 aa13.49□□□□□ -0.25
SEMA4D-216ENST00000474258 CERS3Q8IU89 383 aa13.49□□□□□ -0.25
SEMA4D-216ENST00000474258 WDR18Q9BV38 432 aa13.49□□□□□ -0.25
SEMA4D-216ENST00000474258 GINM1Q9NU53 330 aa13.49□□□□□ -0.25
SEMA4D-216ENST00000474258 PALD1Q9ULE6 856 aa13.49□□□□□ -0.25
SEMA4D-216ENST00000474258 SUPT16HQ9Y5B9 1047 aaKnown RBP13.49□□□□□ -0.25
SEMA4D-216ENST00000474258 ADCY3O60266 1144 aa13.48□□□□□ -0.25
SEMA4D-216ENST00000474258 HLA-DOAP06340 250 aa13.48□□□□□ -0.25
SEMA4D-216ENST00000474258 GJB1P08034 283 aa13.48□□□□□ -0.25
SEMA4D-216ENST00000474258 CCL5P13501 91 aa13.48□□□□□ -0.25
SEMA4D-216ENST00000474258 FLT3LGP49771 235 aa13.48□□□□□ -0.25
SEMA4D-216ENST00000474258 MAP3K12Q12852 859 aa13.48□□□□□ -0.25
SEMA4D-216ENST00000474258 MAGEB6Q8N7X4 407 aa13.48□□□□□ -0.25
SEMA4D-216ENST00000474258 RHPN1Q8TCX5 695 aa13.48□□□□□ -0.25
SEMA4D-216ENST00000474258 COA7Q96BR5 231 aa13.48□□□□□ -0.25
SEMA4D-216ENST00000474258 RNF208Q9H0X6 261 aa13.48□□□□□ -0.25
SEMA4D-216ENST00000474258 DNAJC18Q9H819 358 aa13.48□□□□□ -0.25
SEMA4D-216ENST00000474258 RCAN3Q9UKA8 241 aa13.48□□□□□ -0.25
SEMA4D-216ENST00000474258 MYH8P13535 1937 aa13.47□□□□□ -0.25
SEMA4D-216ENST00000474258 C19orf81C9J6K1 198 aa13.47□□□□□ -0.25
SEMA4D-216ENST00000474258 USP5P45974 858 aa13.47□□□□□ -0.25
SEMA4D-216ENST00000474258 GJA8P48165 433 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms