RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 RGS3P49796 1198 aa16.03■□□□□ 0.16
PCYT1A-214ENST00000473978 SPP2Q13103 211 aa16.03■□□□□ 0.16
PCYT1A-214ENST00000473978 USP6NLQ92738 828 aa16.03■□□□□ 0.16
PCYT1A-214ENST00000473978 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
PCYT1A-214ENST00000473978 PRDM5Q9NQX1 630 aaPredicted RBP16.03■□□□□ 0.16
PCYT1A-214ENST00000473978 ARIH1Q9Y4X5 557 aaPredicted RBP16.03■□□□□ 0.16
PCYT1A-214ENST00000473978 REV3LO60673 3130 aa16.03■□□□□ 0.16
PCYT1A-214ENST00000473978 CHD9Q3L8U1 2897 aa16.03■□□□□ 0.16
PCYT1A-214ENST00000473978 LOC285556D6RIA3 1793 aa16.03■□□□□ 0.16
PCYT1A-214ENST00000473978 DDTLA6NHG4 134 aaPredicted RBP16.02■□□□□ 0.16
PCYT1A-214ENST00000473978 APAF1O14727 1248 aa16.02■□□□□ 0.16
PCYT1A-214ENST00000473978 HMGCS2P54868 508 aa16.02■□□□□ 0.16
PCYT1A-214ENST00000473978 PABPC4Q13310 644 aaKnown RBP eCLIP16.02■□□□□ 0.16
PCYT1A-214ENST00000473978 PDE3AQ14432 1141 aa16.02■□□□□ 0.16
PCYT1A-214ENST00000473978 BEND3Q5T5X7 828 aa16.02■□□□□ 0.16
PCYT1A-214ENST00000473978 ZSCAN29Q8IWY8 852 aaPredicted RBP16.02■□□□□ 0.16
PCYT1A-214ENST00000473978 THEGQ9P2T0 379 aa16.02■□□□□ 0.16
PCYT1A-214ENST00000473978 PRDX5P30044 214 aa16.02■□□□□ 0.15
PCYT1A-214ENST00000473978 RALBP1Q15311 655 aa16.02■□□□□ 0.15
PCYT1A-214ENST00000473978 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.15
PCYT1A-214ENST00000473978 LRRC24Q50LG9 513 aa16.02■□□□□ 0.15
PCYT1A-214ENST00000473978 VGLL2Q8N8G2 317 aa16.02■□□□□ 0.15
PCYT1A-214ENST00000473978 WDR66Q8TBY9 1149 aa16.02■□□□□ 0.15
PCYT1A-214ENST00000473978 C1QTNF1Q9BXJ1 281 aa16.02■□□□□ 0.15
PCYT1A-214ENST00000473978 IDI2Q9BXS1 227 aa16.02■□□□□ 0.15
PCYT1A-214ENST00000473978 F6X3S4 739 aa16.01■□□□□ 0.15
PCYT1A-214ENST00000473978 GRM8O00222 908 aa16.01■□□□□ 0.15
PCYT1A-214ENST00000473978 DNM1LO00429 736 aa16.01■□□□□ 0.15
PCYT1A-214ENST00000473978 ENTPD3O75355 529 aa16.01■□□□□ 0.15
PCYT1A-214ENST00000473978 MRPS5P82675 430 aaKnown RBP16.01■□□□□ 0.15
PCYT1A-214ENST00000473978 METTL24Q5JXM2 366 aa16.01■□□□□ 0.15
PCYT1A-214ENST00000473978 ZNF280CQ8ND82 737 aa16.01■□□□□ 0.15
PCYT1A-214ENST00000473978 TXNRD2Q9NNW7 524 aa16.01■□□□□ 0.15
PCYT1A-214ENST00000473978 PDE8BO95263 885 aa16■□□□□ 0.15
PCYT1A-214ENST00000473978 DNAJB2P25686 324 aa16■□□□□ 0.15
PCYT1A-214ENST00000473978 RGS2P41220 211 aa16■□□□□ 0.15
PCYT1A-214ENST00000473978 MORN1Q5T089 497 aa16■□□□□ 0.15
PCYT1A-214ENST00000473978 POTEEQ6S8J3 1075 aa16■□□□□ 0.15
PCYT1A-214ENST00000473978 SLC39A5Q6ZMH5 540 aa16■□□□□ 0.15
PCYT1A-214ENST00000473978 SH3RF1Q7Z6J0 888 aa16■□□□□ 0.15
PCYT1A-214ENST00000473978 GPRC5AQ8NFJ5 357 aa16■□□□□ 0.15
PCYT1A-214ENST00000473978 LPAR1Q92633 364 aa16■□□□□ 0.15
PCYT1A-214ENST00000473978 RNPC3Q96LT9 517 aaKnown RBP16■□□□□ 0.15
PCYT1A-214ENST00000473978 ZNF576Q9H609 170 aa16■□□□□ 0.15
PCYT1A-214ENST00000473978 DDX20Q9UHI6 824 aaKnown RBP16■□□□□ 0.15
PCYT1A-214ENST00000473978 TRIM43BA6NCK2 446 aa15.99■□□□□ 0.15
PCYT1A-214ENST00000473978 EPHB4P54760 987 aa15.99■□□□□ 0.15
PCYT1A-214ENST00000473978 Q3C1V9 767 aa15.99■□□□□ 0.15
PCYT1A-214ENST00000473978 TRIM43Q96BQ3 446 aaPredicted RBP15.99■□□□□ 0.15
PCYT1A-214ENST00000473978 NECAB3Q96P71 396 aaPredicted RBP15.99■□□□□ 0.15
PCYT1A-214ENST00000473978 P2RX7Q99572 595 aaKnown RBP15.99■□□□□ 0.15
PCYT1A-214ENST00000473978 PORCNQ9H237 461 aa15.99■□□□□ 0.15
PCYT1A-214ENST00000473978 PDLIM7Q9NR12 457 aa15.99■□□□□ 0.15
PCYT1A-214ENST00000473978 HCN4Q9Y3Q4 1203 aa15.99■□□□□ 0.15
PCYT1A-214ENST00000473978 RFX7Q2KHR2 1363 aa15.99■□□□□ 0.15
PCYT1A-214ENST00000473978 RLFQ13129 1914 aa15.98■□□□□ 0.15
PCYT1A-214ENST00000473978 FAM196BA6NMK8 535 aa15.98■□□□□ 0.15
PCYT1A-214ENST00000473978 MAPK4P31152 587 aa15.98■□□□□ 0.15
PCYT1A-214ENST00000473978 TRIM60Q495X7 471 aa15.98■□□□□ 0.15
PCYT1A-214ENST00000473978 SH3D19Q5HYK7 790 aa15.98■□□□□ 0.15
PCYT1A-214ENST00000473978 GPR142Q7Z601 462 aa15.98■□□□□ 0.15
PCYT1A-214ENST00000473978 KAZALD1Q96I82 304 aa15.98■□□□□ 0.15
PCYT1A-214ENST00000473978 APBA2Q99767 749 aa15.98■□□□□ 0.15
PCYT1A-214ENST00000473978 DDX4Q9NQI0 724 aaKnown RBP15.98■□□□□ 0.15
PCYT1A-214ENST00000473978 FLRT1Q9NZU1 646 aa15.98■□□□□ 0.15
PCYT1A-214ENST00000473978 ITGB8P26012 769 aa15.97■□□□□ 0.15
PCYT1A-214ENST00000473978 IRX3P78415 501 aaPredicted RBP15.97■□□□□ 0.15
PCYT1A-214ENST00000473978 GJC2Q5T442 439 aaPredicted RBP15.97■□□□□ 0.15
PCYT1A-214ENST00000473978 SUCLG2Q96I99 432 aa15.97■□□□□ 0.15
PCYT1A-214ENST00000473978 KIF16BQ96L93 1317 aa15.97■□□□□ 0.15
PCYT1A-214ENST00000473978 LRFN3Q9BTN0 628 aa15.97■□□□□ 0.15
PCYT1A-214ENST00000473978 RBPJLQ9UBG7 517 aa15.97■□□□□ 0.15
PCYT1A-214ENST00000473978 CHD7Q9P2D1 2997 aa15.97■□□□□ 0.15
PCYT1A-214ENST00000473978 LDHBP07195 334 aaKnown RBP15.96■□□□□ 0.15
PCYT1A-214ENST00000473978 FGFR2P21802 821 aa15.96■□□□□ 0.15
PCYT1A-214ENST00000473978 CNGA1P29973 690 aa15.96■□□□□ 0.15
PCYT1A-214ENST00000473978 HERVK_113P62684 666 aa15.96■□□□□ 0.15
PCYT1A-214ENST00000473978 AKNAD1Q5T1N1 836 aa15.96■□□□□ 0.15
PCYT1A-214ENST00000473978 PLEKHH3Q7Z736 793 aa15.96■□□□□ 0.15
PCYT1A-214ENST00000473978 IL27Q8NEV9 243 aa15.96■□□□□ 0.15
PCYT1A-214ENST00000473978 GAS2L1Q99501 681 aaPredicted RBP15.96■□□□□ 0.15
PCYT1A-214ENST00000473978 C9orf78Q9NZ63 289 aaPredicted RBP15.96■□□□□ 0.15
PCYT1A-214ENST00000473978 MUC6Q6W4X9 2439 aa15.96■□□□□ 0.14
PCYT1A-214ENST00000473978 MYH13Q9UKX3 1938 aa15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 TBC1D12O60347 775 aa15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 MSCO60682 206 aa15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 IFIT1P09914 478 aaKnown RBP15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 PICALMQ13492 652 aa15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 SNX17Q15036 470 aa15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 CCDC85BQ15834 202 aaPredicted RBP15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 MFSD14CQ5VZR4 134 aa15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 ALYREFQ86V81 257 aaKnown RBP15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 CCAR1Q8IX12 1150 aaKnown RBP15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 TIFAQ96CG3 184 aa15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 OSBPL5Q9H0X9 879 aaPredicted RBP15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 MYBBP1AQ9BQG0 1328 aaKnown RBP15.95■□□□□ 0.14
PCYT1A-214ENST00000473978 MYO9BQ13459 2157 aa15.94■□□□□ 0.14
PCYT1A-214ENST00000473978 HOXA7P31268 230 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms