RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ZNF646O15015 1829 aaPredicted RBP21.06■□□□□ 0.96
VARS2-206ENST00000473916 FOCADQ5VW36 1801 aa21.06■□□□□ 0.96
VARS2-206ENST00000473916 MYH1P12882 1939 aa21.06■□□□□ 0.96
VARS2-206ENST00000473916 GPR75-ASB3A0A0A6YYF3 556 aa21.05■□□□□ 0.96
VARS2-206ENST00000473916 FSD2A1L4K1 749 aa21.05■□□□□ 0.96
VARS2-206ENST00000473916 LDHCP07864 332 aa21.05■□□□□ 0.96
VARS2-206ENST00000473916 SART3Q15020 963 aaKnown RBP21.05■□□□□ 0.96
VARS2-206ENST00000473916 NTRK3Q16288 839 aa21.05■□□□□ 0.96
VARS2-206ENST00000473916 TTC6Q86TZ1 520 aa21.05■□□□□ 0.96
VARS2-206ENST00000473916 ZSCAN23Q3MJ62 389 aa21.05■□□□□ 0.96
VARS2-206ENST00000473916 NOL10Q9BSC4 688 aaKnown RBP21.05■□□□□ 0.96
VARS2-206ENST00000473916 TMX4Q9H1E5 349 aaPredicted RBP21.05■□□□□ 0.96
VARS2-206ENST00000473916 ERICH2A1L162 156 aa21.04■□□□□ 0.96
VARS2-206ENST00000473916 RHBDL3P58872 404 aa21.04■□□□□ 0.96
VARS2-206ENST00000473916 C12orf60Q5U649 245 aa21.04■□□□□ 0.96
VARS2-206ENST00000473916 ILDR1Q86SU0 546 aaPredicted RBP21.04■□□□□ 0.96
VARS2-206ENST00000473916 C7orf43Q8WVR3 580 aa21.04■□□□□ 0.96
VARS2-206ENST00000473916 ZSCAN10Q96SZ4 725 aaPredicted RBP21.04■□□□□ 0.96
VARS2-206ENST00000473916 DAGLAQ9Y4D2 1042 aa21.04■□□□□ 0.96
VARS2-206ENST00000473916 GAKO14976 1311 aa21.04■□□□□ 0.96
VARS2-206ENST00000473916 MBD3O95983 291 aa21.04■□□□□ 0.96
VARS2-206ENST00000473916 KRT85P78386 507 aa21.04■□□□□ 0.96
VARS2-206ENST00000473916 ZNF654Q8IZM8 581 aa21.04■□□□□ 0.96
VARS2-206ENST00000473916 CMTR1Q8N1G2 835 aaKnown RBP21.04■□□□□ 0.96
VARS2-206ENST00000473916 KIF3AQ9Y496 699 aa21.04■□□□□ 0.96
VARS2-206ENST00000473916 C10orf71Q711Q0 1435 aa21.04■□□□□ 0.96
VARS2-206ENST00000473916 SNED1Q8TER0 1413 aa21.03■□□□□ 0.96
VARS2-206ENST00000473916 PLCD1P51178 756 aa21.03■□□□□ 0.96
VARS2-206ENST00000473916 TEX11Q8IYF3 940 aa21.03■□□□□ 0.96
VARS2-206ENST00000473916 SLC44A5Q8NCS7 719 aa21.03■□□□□ 0.96
VARS2-206ENST00000473916 FTOQ9C0B1 505 aaKnown RBP eCLIP21.03■□□□□ 0.96
VARS2-206ENST00000473916 GOLGA6L3A6NEY3 463 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 ORC4O43929 436 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 IGSF3O75054 1194 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 SCNN1DP51172 638 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 NUP133Q8WUM0 1156 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 CNKSR1Q969H4 720 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 CHMP4CQ96CF2 233 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 C8orf76Q96K31 380 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 MYH6P13533 1939 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 NID2Q14112 1375 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 G3V3G9 751 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 DCAF8Q5TAQ9 597 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 FAM163AQ96GL9 167 aaPredicted RBP21.02■□□□□ 0.96
VARS2-206ENST00000473916 EYA3Q99504 573 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 MTA3Q9BTC8 594 aa21.02■□□□□ 0.96
VARS2-206ENST00000473916 FLT1P17948 1338 aa21.01■□□□□ 0.95
VARS2-206ENST00000473916 CCDC82Q8N4S0 544 aa21.01■□□□□ 0.95
VARS2-206ENST00000473916 TTF2Q9UNY4 1162 aaKnown RBP21.01■□□□□ 0.95
VARS2-206ENST00000473916 C21orf2O43822 256 aa21■□□□□ 0.95
VARS2-206ENST00000473916 PCP11498 1178 aaKnown RBP21■□□□□ 0.95
VARS2-206ENST00000473916 UBE2HP62256 183 aa21■□□□□ 0.95
VARS2-206ENST00000473916 RTN1Q16799 776 aa21■□□□□ 0.95
VARS2-206ENST00000473916 SYNE3Q6ZMZ3 975 aa21■□□□□ 0.95
VARS2-206ENST00000473916 ZSCAN16Q9H4T2 348 aaPredicted RBP21■□□□□ 0.95
VARS2-206ENST00000473916 CEBPZQ03701 1054 aaKnown RBP21■□□□□ 0.95
VARS2-206ENST00000473916 AOC3Q16853 763 aa21■□□□□ 0.95
VARS2-206ENST00000473916 IFIT1BQ5T764 474 aaKnown RBP21■□□□□ 0.95
VARS2-206ENST00000473916 FBXO18Q8NFZ0 1043 aa21■□□□□ 0.95
VARS2-206ENST00000473916 SLC26A6Q9BXS9 759 aa21■□□□□ 0.95
VARS2-206ENST00000473916 ROBO3Q96MS0 1386 aa20.99■□□□□ 0.95
VARS2-206ENST00000473916 SLC3A2P08195 630 aaKnown RBP20.99■□□□□ 0.95
VARS2-206ENST00000473916 GUCY1A2P33402 732 aa20.99■□□□□ 0.95
VARS2-206ENST00000473916 IARSP41252 1262 aaKnown RBP20.99■□□□□ 0.95
VARS2-206ENST00000473916 PDE4BQ07343 736 aa20.99■□□□□ 0.95
VARS2-206ENST00000473916 IQCA1Q86XH1 822 aa20.99■□□□□ 0.95
VARS2-206ENST00000473916 LEO1Q8WVC0 666 aaPredicted RBP20.99■□□□□ 0.95
VARS2-206ENST00000473916 ALG1Q9BT22 464 aa20.99■□□□□ 0.95
VARS2-206ENST00000473916 KIF28PB7ZC32 967 aa20.99■□□□□ 0.95
VARS2-206ENST00000473916 ECE2O60344 883 aa20.99■□□□□ 0.95
VARS2-206ENST00000473916 CDKL5O76039 1030 aa20.99■□□□□ 0.95
VARS2-206ENST00000473916 POLR3DP05423 398 aaPredicted RBP20.99■□□□□ 0.95
VARS2-206ENST00000473916 TMTC2Q8N394 836 aa20.99■□□□□ 0.95
VARS2-206ENST00000473916 FANCBQ8NB91 859 aa20.99■□□□□ 0.95
VARS2-206ENST00000473916 SPATA32Q96LK8 384 aa20.99■□□□□ 0.95
VARS2-206ENST00000473916 PCDHAC2Q9Y5I4 1007 aa20.99■□□□□ 0.95
VARS2-206ENST00000473916 SYCE3A1L190 88 aa20.98■□□□□ 0.95
VARS2-206ENST00000473916 TSPY2A6NKD2 308 aa20.98■□□□□ 0.95
VARS2-206ENST00000473916 BAZ2BQ9UIF8 2168 aaKnown RBP20.98■□□□□ 0.95
VARS2-206ENST00000473916 ZBTB7AO95365 584 aa20.97■□□□□ 0.95
VARS2-206ENST00000473916 CPLX2Q6PUV4 134 aaKnown RBP20.97■□□□□ 0.95
VARS2-206ENST00000473916 NBPF11Q86T75 865 aa20.97■□□□□ 0.95
VARS2-206ENST00000473916 SLF2Q8IX21 1173 aa20.97■□□□□ 0.95
VARS2-206ENST00000473916 IFNAR1P17181 557 aa20.97■□□□□ 0.95
VARS2-206ENST00000473916 ZNF445P59923 1031 aa20.97■□□□□ 0.95
VARS2-206ENST00000473916 TFAP4Q01664 338 aa20.97■□□□□ 0.95
VARS2-206ENST00000473916 PICALMQ13492 652 aa20.97■□□□□ 0.95
VARS2-206ENST00000473916 RCSD1Q6JBY9 416 aa20.97■□□□□ 0.95
VARS2-206ENST00000473916 PODNQ7Z5L7 613 aa20.97■□□□□ 0.95
VARS2-206ENST00000473916 IL17RBQ9NRM6 502 aa20.97■□□□□ 0.95
VARS2-206ENST00000473916 FMNL1O95466 1100 aaPredicted RBP20.96■□□□□ 0.95
VARS2-206ENST00000473916 XRCC6P12956 609 aaKnown RBP eCLIP20.96■□□□□ 0.95
VARS2-206ENST00000473916 DPEP1P16444 411 aa20.96■□□□□ 0.95
VARS2-206ENST00000473916 PLCG2P16885 1265 aa20.96■□□□□ 0.95
VARS2-206ENST00000473916 KCNA3P22001 575 aa20.96■□□□□ 0.95
VARS2-206ENST00000473916 SSRP1Q08945 709 aaKnown RBP20.96■□□□□ 0.95
VARS2-206ENST00000473916 CSPP1Q1MSJ5 1256 aa20.96■□□□□ 0.95
VARS2-206ENST00000473916 USP28Q96RU2 1077 aa20.96■□□□□ 0.95
VARS2-206ENST00000473916 SCAND2PQ9GZW5 306 aaPredicted RBP20.96■□□□□ 0.95
VARS2-206ENST00000473916 DDX4Q9NQI0 724 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms